PMC:7029452 / 3231-10265 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7029452","sourcedb":"PMC","sourceid":"7029452","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7029452","text":"Methods\n\nFrench surveillance system\nIn France, according to the COVID-19 surveillance protocol, physicians suspecting a COVID-19 case have to contact immediately either the emergency hotline (SAMU-Centre 15), if the patient is seeking medical attention from a general practitioner, or a referring infectious diseases specialist at hospital level. Together, they evaluate whether the patient matches the case definition criteria for a possible case (see below). If they do, the case has to be reported immediately through a 24/7 available phone line to the Regional Health Agency (Agence régionale de santé, ARS), which informs without delay the hospital infection control teams involved in the management of the patient, the French Public Health Agency (Santé publique France, SpFrance) and the Ministry of Health.\nA standardised investigation form collecting socio-demographical information, clinical details and history of exposure (history of travel to or residence in Wuhan, China or contact with a confirmed case) is completed for each possible case at regional level, in collaboration between the clinicians, the ARS and SpFrance. Data are entered into the secure web-based application Voozanoo (Epiconcept, Paris).\nPossible cases have to be hospitalised, isolated and cared for in one of the 38 French referral hospitals designated by the Ministry of Health, according to the guidelines for the management of patients with Middle East respiratory syndrome (MERS) [3].\nFor each possible case, respiratory samples from the upper respiratory tract (nasopharyngeal swabs or aspirates) and when possible from the lower respiratory tract (bronchoalveolar lavage fluid, when indicated, or induced sputum) are collected and sent to one of the laboratories accredited to perform SARS-CoV-2-specific real-time RT-PCR. Until 27 January, only the National Reference Centre for respiratory viruses (Institut Pasteur, Paris) was able to test for the presence of the SARS-CoV-2.\n\nCase definition\nFrom 17 to 29 January 2020, a possible case was defined either as a patient with a severe acute lower respiratory infection requiring admission to hospital and with a history of travel to or residence in Wuhan, China in the 14 days before symptom onset, or a patient with an acute respiratory illness whatever the severity and with a history of at-risk exposure, mainly to a confirmed case. A confirmed case was defined as a possible case with a positive SARS-CoV-2 RT-PCR on respiratory samples, performed by an accredited laboratory. Testing relied on the real-time RT-PCR procedure developed by the Charité [4] as well as on the use of real-time RT-PCR specific for the RdRp gene (four targets) designed at Institut Pasteur (RdRp-IP).\nThe case definition was first set up on 10 January and adapted over time. The detailed case definition used for the cases presented here as well as the most up-to-date case definition are available in the Supplement.\n\nContact and co-exposure tracing\nCo-exposed persons are defined as people who shared the same risks of exposure as a possible or confirmed case of COVID-19. Contact and co-exposure identification is done for all identified possible cases. Contacts are traced from the date of onset of clinical symptoms in a case. If the diagnosis of SARS-CoV-2 infection is confirmed in the index case, active surveillance of contacts/co-exposed persons is initiated immediately.\nThree levels of risk of infection are defined for contacts/co-exposed persons of a possible/confirmed COVID-19 case (Table). Co-exposed persons of a confirmed case are followed-up according to the same procedure as a moderate-/high-risk contact. The follow-up procedure for the contacts/co-exposed persons differs according to the evaluation of the level of risk of infection (Table).\nTable Definition of a contact and follow-up procedure by level of risk of infection, COVID-19, France, January 2020\nLevel of risk of infection Contact definition Follow-up procedure\nNegligible risk Person who had short (\u003c 15 min) contact with a confirmed case in public settings such as in public transportation, restaurants and shops; healthcare personnel who treated a confirmed case while wearing appropriate PPE without any breach identified. Neither identification nor information of contacts.\nLow risk Person who had a close (within 1 m) but short (\u003c 15 min) contact with a confirmed case, or a distant (\u003e 1 m) but prolonged contact in public settings, or any contact in private settings that does not match with the moderate/high risk of exposure criteria. Contacts are asked to measure their body temperature twice a day and check for clinical symptoms. In case of occurrence of symptoms like fever, cough or dyspnoea, contacts are asked to wear a surgical mask, isolate themselves and immediately contact the emergency hotline (SAMU-centre 15) indicating that they are contacts of a confirmed COVID-19 case.\nModerate/high risk Person who had prolonged (\u003e 15 min) direct face-to-face contact within 1 m with a confirmed case, shared the same hospital room, lived in the same household or shared any leisure or professional activity in close proximity with a confirmed case, or travelled together with a COVID-19 case in any kind of conveyance, without appropriate individual protection equipment. Healthcare personnel who treated a confirmed case without wearing appropriate PPE or with an identified breach. In addition to the above, contacts are asked to stay at home during a 14-day period after their last contact with the confirmed case while symptomatic and to avoid contacts with the other persons living in the same household (or at least wear a surgical mask). The follow-up consists of an active follow-up through daily calls from the regional follow-up team organised by the Regional Health Agency in collaboration with Santé publique France.\nCOVID-19: coronavirus disease 2019; PPE: personal protective equipment. During the initial implementation phase of the procedure, owing to the limited number of contacts involved, it was decided to also implement an active follow-up for low risk contacts.\nPatients are interviewed by the clinicians, with the help of a translator if needed, who recover relevant information on their contacts since onset of clinical symptoms and the nature and intensity of exposure. The involved regional health agencies work closely with the regional entities of Santé publique France (cellules régionales) in order to implement contact tracing and follow-up. Santé publique France coordinates the surveillance at national level in liaison with the national Health Authorities.\n\nEthical statement\nThe investigations were carried out in accordance with the General Data Protection Regulation (Regulation (EU) 2016/679 and Directive 95/46/EC) and the French data protection law (Law 78–17 on 06/01/1978 and Décret 2019–536 on 29/05/2019). Informed consent to disclosure of information relevant to this publication was obtained from the three patients confirmed with 2019-nCoV 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