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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 18-26 Disease denotes COVID-19 MESH:C000657245
11 498-520 Species denotes 2019 novel coronavirus Tax:2697049
12 522-531 Species denotes 2019-nCoV Tax:2697049
13 860-869 Species denotes 2019-nCoV Tax:2697049
14 942-987 Species denotes Severe Acute Respiratory Syndrome coronavirus Tax:694009
15 989-997 Species denotes SARS-CoV Tax:694009
16 1004-1056 Species denotes Middle East Respiratory Syndrome-related coronavirus Tax:1335626
17 1058-1066 Species denotes MERS-CoV Tax:1335626
18 1093-1110 Species denotes influenza viruses Tax:11308
19 739-748 Disease denotes infection MESH:D007239
24 1503-1511 Species denotes patients Tax:9606
25 1566-1583 Species denotes novel coronavirus Tax:2697049
26 1584-1593 Species denotes 2019-nCoV Tax:2697049
27 1548-1556 Disease denotes infected MESH:D007239
35 1875-1885 Species denotes collection Tax:1768868
36 2377-2382 Species denotes human Tax:9606
37 2386-2391 Species denotes human Tax:9606
38 1839-1863 Disease denotes Coronavirus disease 2019 MESH:C000657245
39 1865-1873 Disease denotes COVID-19 MESH:C000657245
40 1976-2000 Disease denotes coronavirus disease 2019 MESH:C000657245
41 2002-2010 Disease denotes COVID-19 MESH:C000657245

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T44 1699-1704 NCBITaxon:10239 denotes virus
T43 1839-1850 NCBITaxon:11118 denotes Coronavirus
T42 1865-1873 SP_7 denotes COVID-19
T41 1976-1987 NCBITaxon:11118 denotes coronavirus
T40 2002-2010 SP_7 denotes COVID-19
T39 2233-2238 NCBITaxon:10239 denotes virus
T38 2377-2382 SP_6;NCBITaxon:9606 denotes human
T37 2386-2391 SP_6;NCBITaxon:9606 denotes human
T29 1572-1583 NCBITaxon:11118 denotes coronavirus
T28 1584-1593 SP_7 denotes 2019-nCoV
T23 437-451 CHEBI:52217;CHEBI:52217 denotes pharmaceutical
T22 509-520 NCBITaxon:11118 denotes coronavirus
T21 522-531 SP_7 denotes 2019-nCoV
T20 860-869 SP_7 denotes 2019-nCoV
T19 902-907 NCBITaxon:10239 denotes viral
T18 908-919 UBERON:0001004 denotes respiratory
T17 942-987 SP_10 denotes Severe Acute Respiratory Syndrome coronavirus
T16 989-997 SP_10 denotes SARS-CoV
T15 1045-1056 NCBITaxon:11118 denotes coronavirus
T14 1058-1066 SP_9 denotes MERS-CoV
T13 1093-1102 NCBITaxon:7719 denotes influenza
T12 1103-1110 NCBITaxon:10239 denotes viruses
T2 18-26 SP_7 denotes COVID-19

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 18-26 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 739-748 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T3 942-975 Disease denotes Severe Acute Respiratory Syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T4 989-997 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T5 1093-1102 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T6 1839-1863 Disease denotes Coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T7 1865-1873 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 1976-2000 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T9 2002-2010 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 216-217 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 1103-1110 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T3 1346-1349 http://purl.obolibrary.org/obo/PR_000001343 denotes aim
T4 1699-1704 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T5 2171-2172 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 2233-2238 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T7 2377-2382 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T8 2386-2391 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 309-323 Chemical denotes pharmaceutical http://purl.obolibrary.org/obo/CHEBI_52217
T2 418-429 Chemical denotes application http://purl.obolibrary.org/obo/CHEBI_33232
T3 437-451 Chemical denotes pharmaceutical http://purl.obolibrary.org/obo/CHEBI_52217

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-86 Sentence denotes Latest updates on COVID-19 from the European Centre for Disease Prevention and Control
T2 88-236 Sentence denotes The European Centre for Disease Prevention and Control (ECDC) provides regularly updated information relevant to Europe through a dedicated webpage.
T3 237-277 Sentence denotes Below we highlight the latest additions.
T4 279-378 Sentence denotes Guidelines for the use of non-pharmaceutical measures to delay and mitigate the impact of 2019-nCoV
T5 379-551 Sentence denotes This document provides guidance on the application of non-pharmaceutical countermeasures to minimise the spread of the 2019 novel coronavirus (2019-nCoV) in the population.
T6 552-749 Sentence denotes Some of the measures proposed refer specifically to certain phases of the epidemic (containment or mitigation phases), and can be adapted depending on the assessed severity/impact of the infection.
T7 750-805 Sentence denotes Other measures are valid for all phases of an epidemic.
T8 806-1111 Sentence denotes The guidance is based on the current knowledge of the 2019-nCoV and evidence available on other viral respiratory pathogens, mainly the Severe Acute Respiratory Syndrome coronavirus (SARS-CoV), the Middle East Respiratory Syndrome-related coronavirus (MERS-CoV) and seasonal or pandemic influenza viruses.
T9 1112-1246 Sentence denotes ECDC will update this guidance as and when new relevant information becomes available or as required by the epidemiological situation.
T10 1248-1341 Sentence denotes Interim guidance for environmental cleaning in non-healthcare facilities exposed to 2019-nCoV
T11 1342-1612 Sentence denotes The aim of this document is to support public health preparedness planning with regard to personal protective equipment (PPE) needs in healthcare settings where patients suspected or confirmed to have been infected with the novel coronavirus 2019-nCoV are being treated.
T12 1614-1626 Sentence denotes Infographic:
T13 1627-1644 Sentence denotes Novel coronavirus
T14 1645-1744 Sentence denotes This infographic provides basic information about the virus, symptoms, prevention and transmission.
T15 1745-1930 Sentence denotes Infographic We would also like to remind the readers of Eurosurveillance about our dedicated ‘Coronavirus disease 2019 (COVID-19) collection’ that we update regularly with new articles.
T16 1931-2405 Sentence denotes The most recent addition was ‘First cases of coronavirus disease 2019 (COVID-19) in France: surveillance, investigations and control measures, January 2020’ while it already contained several articles about, for example, the development of a diagnostic methodology based on RT-PCR without the need for virus material, the severity among hospitalised cases, early-stage estimates of the importation risk to Europe, and estimated patterns of early human-to-human transmission.