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PMC:7029449 / 5453-8651 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
87 40-45 Species denotes human Tax:9606
88 388-397 Species denotes 2019-nCoV Tax:2697049
89 900-909 Species denotes 2019-nCoV Tax:2697049
90 768-777 Species denotes influenza Tax:11309
91 832-841 Species denotes influenza Tax:11309
92 933-942 Species denotes influenza Tax:11309
93 1019-1028 Species denotes influenza Tax:11309
94 46-56 Disease denotes infections MESH:D007239
95 107-116 Disease denotes pneumonia MESH:D011014
96 163-173 Disease denotes infections MESH:D007239
97 188-197 Disease denotes pneumonia MESH:D011014
98 232-242 Disease denotes infections MESH:D007239
99 474-484 Disease denotes infections MESH:D007239
100 497-507 Disease denotes infections MESH:D007239
101 564-584 Disease denotes 2019-nCoV infections MESH:C000657245
102 724-733 Disease denotes infection MESH:D007239
103 986-995 Disease denotes infection MESH:D007239
109 1405-1410 Species denotes women Tax:9606
110 1453-1461 Species denotes children Tax:9606
111 1212-1222 Disease denotes Infections MESH:D007239
112 1268-1273 Disease denotes obese MESH:D009765
113 1382-1392 Disease denotes infections MESH:D007239
122 1692-1700 Species denotes children Tax:9606
123 2295-2300 Species denotes child Tax:9606
124 2336-2344 Species denotes children Tax:9606
125 2365-2374 Species denotes 2019-nCoV Tax:2697049
126 1659-1668 Disease denotes infection MESH:D007239
127 1716-1725 Disease denotes infection MESH:D007239
128 1756-1765 Disease denotes infection MESH:D007239
129 1996-2004 Disease denotes infected MESH:D007239
134 2863-2872 Species denotes 2019-nCoV Tax:2697049
135 2897-2905 Species denotes MERS-CoV Tax:1335626
136 2669-2688 Disease denotes 2019-nCoV infection MESH:C000657245
137 3073-3082 Disease denotes infection MESH:D007239

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T69 40-45 SP_6;NCBITaxon:9606 denotes human
T68 280-286 UBERON:0007023 denotes adults
T67 388-397 SP_7 denotes 2019-nCoV
T66 564-573 SP_7 denotes 2019-nCoV
T65 900-909 SP_7 denotes 2019-nCoV
T64 1260-1266 UBERON:0007023 denotes adults
T63 1274-1285 NCBITaxon:1 denotes individuals
T62 1396-1404 GO:0007565 denotes pregnant
T61 1789-1795 UBERON:0002405 denotes immune
T60 1929-1934 NCBITaxon:10239 denotes virus
T59 1966-1971 NCBITaxon:10239 denotes virus
T58 2365-2374 SP_7 denotes 2019-nCoV
T57 2669-2678 SP_7 denotes 2019-nCoV
T56 2786-2796 GO:0042571 denotes antibodies
T55 2863-2872 SP_7 denotes 2019-nCoV
T54 2897-2905 SP_9 denotes MERS-CoV
T53 2971-2981 GO:0042571 denotes antibodies
T52 3039-3047 GO:0042571 denotes antibody

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T4 3039-3047 Body_part denotes antibody http://purl.org/sig/ont/fma/fma62871

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 822-828 Body_part denotes scales http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T21 46-56 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T22 107-116 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T23 163-173 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T24 188-197 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T25 232-242 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T26 474-484 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T27 497-507 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T28 564-584 Disease denotes 2019-nCoV infections http://purl.obolibrary.org/obo/MONDO_0100096
T29 724-733 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T30 768-777 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T31 832-841 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T32 933-942 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T33 986-995 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T34 1019-1028 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812
T35 1382-1395 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T36 1659-1668 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T37 1716-1725 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T38 1756-1765 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T39 2669-2688 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T40 2679-2688 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T41 3073-3082 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T32 40-45 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T33 81-82 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 1119-1120 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T35 1479-1481 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T36 1492-1493 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T37 1929-1934 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T38 1966-1971 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T39 2164-2165 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T40 2988-2989 http://purl.obolibrary.org/obo/CLO_0001020 denotes A

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 1503-1508 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T2 1681-1686 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T3 2487-2495 Chemical denotes carriers http://purl.obolibrary.org/obo/CHEBI_78059

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T4 107-116 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T5 188-197 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T6 490-507 Phenotype denotes severe infections http://purl.obolibrary.org/obo/HP_0032169

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T30 0-29 Sentence denotes Disease severity and immunity
T31 30-198 Sentence denotes The first human infections were identified through a surveillance system for pneumonia of unknown aetiology, and all of the earliest infections therefore had pneumonia.
T32 199-508 Sentence denotes It is well established that some infections can be severe, particularly in older adults with underlying medical conditions [15,16], but based on the generally mild clinical presentation of 2019-nCoV cases detected outside China, it appears that there could be many more mild infections than severe infections.
T33 509-701 Sentence denotes Determining the spectrum of clinical manifestations of 2019-nCoV infections is perhaps the most urgent research priority, because it determines the strength of public health response required.
T34 702-953 Sentence denotes If the seriousness of infection is similar to the 1918/19 Spanish influenza, and therefore at the upper end of severity scales in influenza pandemic plans, the same responses would be warranted for 2019-nCoV as for the most severe influenza pandemics.
T35 954-1111 Sentence denotes If, however, the seriousness of infection is similar to seasonal influenza, especially during milder seasons, mitigation measures could be tuned accordingly.
T36 1112-1211 Sentence denotes Beyond a robust assessment of overall severity, it is also important to determine high risk groups.
T37 1212-1466 Sentence denotes Infections would likely be more severe in older adults, obese individuals or those with underlying medical conditions, but there have not yet been reports of severity of infections in pregnant women, and very few cases have been reported in children [2].
T38 1467-1687 Sentence denotes Those under 18 years are a critical group to study in order to tease out the relative roles of susceptibility vs severity as possible underlying causes for the very rare recorded instances of infection in this age group.
T39 1688-1766 Sentence denotes Are children protected from infection or do they not fall ill after infection?
T40 1767-1935 Sentence denotes If they are naturally immune, which is unlikely, we should understand why; otherwise, even if they do not show symptoms, it is important to know if they shed the virus.
T41 1936-2067 Sentence denotes Obviously, the question about virus shedding of those being infected but asymptomatic leads to the crucial question of infectivity.
T42 2068-2326 Sentence denotes Answers to these questions are especially pertinent as basis for decisions on school closure as a social distancing intervention, which can be hugely disruptive not only for students but also because of its knock-on effect for child care and parental duties.
T43 2327-2496 Sentence denotes Very few children have been confirmed 2019-nCoV cases so far but that does not necessarily mean that they are less susceptible or that they could not be latent carriers.
T44 2497-2612 Sentence denotes Serosurveys in affected locations could inform this, in addition to truly assessing the clinical severity spectrum.
T45 2613-2818 Sentence denotes Another question on susceptibility is regarding whether 2019-nCoV infection confers neutralising immunity, usually but not always, indicated by the presence of neutralising antibodies in convalescent sera.
T46 2819-2987 Sentence denotes Some experts already questioned whether the 2019-nCoV may behave similarly to MERS-CoV in cases exhibiting mild symptoms without eliciting neutralising antibodies [17].
T47 2988-3105 Sentence denotes A separate question pertains to the possibility of antibody-dependent enhancement of infection or of disease [18,19].
T48 3106-3198 Sentence denotes If either of these were to be relevant, the transmission dynamics could become more complex.