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PMC:7029448 / 0-2668 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
2 38-55 Species denotes novel coronavirus Tax:2697049
3 57-66 Species denotes 2019-nCoV Tax:2697049
6 329-338 Species denotes 2019-nCoV Tax:2697049
7 164-197 Disease denotes coronavirus (2019-nCoV) infection MESH:C000657245
16 759-776 Species denotes human coronavirus Tax:694448
17 798-815 Species denotes novel coronavirus Tax:2697049
18 817-826 Species denotes 2019-nCoV Tax:2697049
19 1317-1322 Species denotes human Tax:9606
20 1326-1331 Species denotes human Tax:9606
21 1374-1381 Species denotes persons Tax:9606
22 1492-1501 Species denotes 2019-nCoV Tax:2697049
23 1113-1119 Disease denotes deaths MESH:D003643
28 2337-2346 Species denotes 2019-nCoV Tax:2697049
29 2644-2649 Species denotes Human Tax:9606
30 2650-2659 Species denotes Influenza Tax:11308
31 2563-2577 Disease denotes viral diseases MESH:D001102

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 176-197 Disease denotes (2019-nCoV) infection http://purl.obolibrary.org/obo/MONDO_0100096
T2 188-197 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T3 2563-2577 Disease denotes viral diseases http://purl.obolibrary.org/obo/MONDO_0005108
T4 2650-2659 Disease denotes Influenza http://purl.obolibrary.org/obo/MONDO_0005812

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 247-252 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T2 495-500 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T3 531-532 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T4 742-743 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 759-764 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T6 861-866 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T7 1025-1026 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 1317-1322 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T9 1326-1331 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T10 1425-1426 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T11 1597-1609 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T12 1638-1639 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 1756-1761 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T14 1944-1949 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T15 2239-2240 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T16 2644-2649 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-127 Sentence denotes Laboratory readiness and response for novel coronavirus (2019-nCoV) in expert laboratories in 30 EU/EEA countries, January 2020
T2 129-137 Sentence denotes Abstract
T3 138-253 Sentence denotes Timely detection of novel coronavirus (2019-nCoV) infection cases is crucial to interrupt the spread of this virus.
T4 254-430 Sentence denotes We assessed the required expertise and capacity for molecular detection of 2019-nCoV in specialised laboratories in 30 European Union/European Economic Area (EU/EEA) countries.
T5 431-530 Sentence denotes Thirty-eight laboratories in 24 EU/EEA countries had diagnostic tests available by 29 January 2020.
T6 531-595 Sentence denotes A coverage of all EU/EEA countries was expected by mid-February.
T7 596-694 Sentence denotes Availability of primers/probes, positive controls and personnel were main implementation barriers.
T8 696-856 Sentence denotes In early January 2020, it became evident that a new pathogenic human coronavirus, provisionally named novel coronavirus (2019-nCoV), had emerged in China [1,2].
T9 857-1051 Sentence denotes The virus is causing an outbreak, which started in the metropole Wuhan, but was seeded through travellers across China with ongoing secondary chains of transmission in a wider geographical area.
T10 1052-1213 Sentence denotes As at 10 February 2020, 40,553 confirmed cases including 910 deaths have been reported worldwide with an increasing number of cases being reported in Europe [3].
T11 1214-1424 Sentence denotes So far, instances of secondary spread from international travellers have been limited, but clusters of human-to-human transmission have been reported involving persons with close contact to confirmed cases [4].
T12 1425-1560 Sentence denotes A key knowledge gap is the efficiency of community transmission of 2019-nCoV, including the contribution of mild or asymptomatic cases.
T13 1561-1869 Sentence denotes On 30 January 2020, the Word Health Organization (WHO) declared the outbreak a public health emergency of international concern (PHEIC) because of these uncertainties, the ongoing seeding of the virus internationally, and the need for preparedness across the world in order to track and control the epidemic.
T14 1870-2073 Sentence denotes WHO highlighted the crucial role of early detection of cases to interrupt virus spread and emphasised that countries need to put in place strong measures to detect and laboratory-confirm cases early [5].
T15 2074-2230 Sentence denotes Here, we assessed the required expertise and diagnostic capacity in specialised laboratories in 30 European Union/European Economic Area (EU/EEA) countries.
T16 2232-2238 Sentence denotes Survey