PMC:7029158 / 10389-11669 JSONTXT

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T55","span":{"begin":205,"end":207},"obj":"http://purl.obolibrary.org/obo/CLO_0008697"},{"id":"T56","span":{"begin":205,"end":207},"obj":"http://purl.obolibrary.org/obo/CLO_0052381"},{"id":"T57","span":{"begin":571,"end":575},"obj":"http://purl.obolibrary.org/obo/CLO_0053001"},{"id":"T58","span":{"begin":1082,"end":1083},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"Parameter Definitions Estimated mean value Standard deviation Data source\nc0 Contact rate at the initial time 14.781 0.904 1\ncb Minimum contact rate under the current control strategies 2.9253 0.5235 MCMC\nr1 Exponential decreasing rate of contact rate 1.3768 0.283 MCMC\nβ Probability of transmission per contact 2.1011×10−8 1.1886×10−9 1\nq Quarantined rate of exposed individuals 1.2858×10−5 3.1488×10−6 MCMC\nσ Transition rate of exposed individuals to the infected class 1/7 – 2\nλ Rate at which the quarantined uninfected contacts were released into the wider community 1/14 – 3,4\nϱ Probability of having symptoms among infected individuals 0.86834 0.049227 1\nδI0 Initial transition rate of symptomatic infected individuals to the quarantined infected class 0.13266 0.021315 1\n1/δIf The shortest period of diagnosis 0.3654 0.1431 MCMC\nr2 Exponential decreasing rate of diagnose rate 0.3283 0.0225 MCMC\nδq Transition rate of quarantined exposed individuals to the quarantined infected class 0.1259 0.052032 1\nγI Recovery rate of symptomatic infected individuals 0.33029 0.052135 1\nγA Recovery rate of asymptomatic infected individuals 0.13978 0.034821 1\nγH Recovery rate of quarantined infected individuals 0.11624 0.038725 1\nα Disease-induced death rate 1.7826×10−5 6.8331×10−6 1"}

{"project":"LitCovid-sentences","denotations":[{"id":"T62","span":{"begin":0,"end":73},"obj":"Sentence"},{"id":"T63","span":{"begin":74,"end":124},"obj":"Sentence"},{"id":"T64","span":{"begin":125,"end":204},"obj":"Sentence"},{"id":"T65","span":{"begin":205,"end":269},"obj":"Sentence"},{"id":"T66","span":{"begin":270,"end":337},"obj":"Sentence"},{"id":"T67","span":{"begin":338,"end":408},"obj":"Sentence"},{"id":"T68","span":{"begin":409,"end":479},"obj":"Sentence"},{"id":"T69","span":{"begin":480,"end":581},"obj":"Sentence"},{"id":"T70","span":{"begin":582,"end":660},"obj":"Sentence"},{"id":"T71","span":{"begin":661,"end":777},"obj":"Sentence"},{"id":"T72","span":{"begin":778,"end":835},"obj":"Sentence"},{"id":"T73","span":{"begin":836,"end":902},"obj":"Sentence"},{"id":"T74","span":{"begin":903,"end":1008},"obj":"Sentence"},{"id":"T75","span":{"begin":1009,"end":1080},"obj":"Sentence"},{"id":"T76","span":{"begin":1081,"end":1153},"obj":"Sentence"},{"id":"T77","span":{"begin":1154,"end":1225},"obj":"Sentence"},{"id":"T78","span":{"begin":1226,"end":1280},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Parameter Definitions Estimated mean value Standard deviation Data source\nc0 Contact rate at the initial time 14.781 0.904 1\ncb Minimum contact rate under the current control strategies 2.9253 0.5235 MCMC\nr1 Exponential decreasing rate of contact rate 1.3768 0.283 MCMC\nβ Probability of transmission per contact 2.1011×10−8 1.1886×10−9 1\nq Quarantined rate of exposed individuals 1.2858×10−5 3.1488×10−6 MCMC\nσ Transition rate of exposed individuals to the infected class 1/7 – 2\nλ Rate at which the quarantined uninfected contacts were released into the wider community 1/14 – 3,4\nϱ Probability of having symptoms among infected individuals 0.86834 0.049227 1\nδI0 Initial transition rate of symptomatic infected individuals to the quarantined infected class 0.13266 0.021315 1\n1/δIf The shortest period of diagnosis 0.3654 0.1431 MCMC\nr2 Exponential decreasing rate of diagnose rate 0.3283 0.0225 MCMC\nδq Transition rate of quarantined exposed individuals to the quarantined infected class 0.1259 0.052032 1\nγI Recovery rate of symptomatic infected individuals 0.33029 0.052135 1\nγA Recovery rate of asymptomatic infected individuals 0.13978 0.034821 1\nγH Recovery rate of quarantined infected individuals 0.11624 0.038725 1\nα Disease-induced death rate 1.7826×10−5 6.8331×10−6 1"}

{"project":"LitCovid-PubTator","denotations":[{"id":"104","span":{"begin":457,"end":465},"obj":"Disease"},{"id":"105","span":{"begin":621,"end":629},"obj":"Disease"},{"id":"106","span":{"begin":704,"end":712},"obj":"Disease"},{"id":"107","span":{"begin":744,"end":752},"obj":"Disease"},{"id":"108","span":{"begin":976,"end":984},"obj":"Disease"},{"id":"109","span":{"begin":1041,"end":1049},"obj":"Disease"},{"id":"110","span":{"begin":1114,"end":1122},"obj":"Disease"},{"id":"111","span":{"begin":1186,"end":1194},"obj":"Disease"}],"attributes":[{"id":"A104","pred":"tao:has_database_id","subj":"104","obj":"MESH:D007239"},{"id":"A105","pred":"tao:has_database_id","subj":"105","obj":"MESH:D007239"},{"id":"A106","pred":"tao:has_database_id","subj":"106","obj":"MESH:D007239"},{"id":"A107","pred":"tao:has_database_id","subj":"107","obj":"MESH:D007239"},{"id":"A108","pred":"tao:has_database_id","subj":"108","obj":"MESH:D007239"},{"id":"A109","pred":"tao:has_database_id","subj":"109","obj":"MESH:D007239"},{"id":"A110","pred":"tao:has_database_id","subj":"110","obj":"MESH:D007239"},{"id":"A111","pred":"tao:has_database_id","subj":"111","obj":"MESH:D007239"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Parameter Definitions Estimated mean value Standard deviation Data source\nc0 Contact rate at the initial time 14.781 0.904 1\ncb Minimum contact rate under the current control strategies 2.9253 0.5235 MCMC\nr1 Exponential decreasing rate of contact rate 1.3768 0.283 MCMC\nβ Probability of transmission per contact 2.1011×10−8 1.1886×10−9 1\nq Quarantined rate of exposed individuals 1.2858×10−5 3.1488×10−6 MCMC\nσ Transition rate of exposed individuals to the infected class 1/7 – 2\nλ Rate at which the quarantined uninfected contacts were released into the wider community 1/14 – 3,4\nϱ Probability of having symptoms among infected individuals 0.86834 0.049227 1\nδI0 Initial transition rate of symptomatic infected individuals to the quarantined infected class 0.13266 0.021315 1\n1/δIf The shortest period of diagnosis 0.3654 0.1431 MCMC\nr2 Exponential decreasing rate of diagnose rate 0.3283 0.0225 MCMC\nδq Transition rate of quarantined exposed individuals to the quarantined infected class 0.1259 0.052032 1\nγI Recovery rate of symptomatic infected individuals 0.33029 0.052135 1\nγA Recovery rate of asymptomatic infected individuals 0.13978 0.034821 1\nγH Recovery rate of quarantined infected individuals 0.11624 0.038725 1\nα Disease-induced death rate 1.7826×10−5 6.8331×10−6 1"}