
PMC:7019868 / 32317-33624
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
635 | 166-197 | Species | denotes | porcine epidemic diarrhea virus | Tax:28295 |
636 | 199-203 | Species | denotes | PEDV | Tax:28295 |
637 | 246-250 | Species | denotes | PEDV | Tax:28295 |
638 | 45-55 | Chemical | denotes | iPEDVPT-P5 | |
639 | 57-64 | Chemical | denotes | iPEDVPT | |
640 | 65-67 | Chemical | denotes | P5 | MESH:C016883 |
641 | 73-84 | Chemical | denotes | iPEDVPT-P96 | |
642 | 85-87 | Chemical | denotes | 5S | |
643 | 92-99 | Chemical | denotes | iPEDVPT | |
644 | 373-384 | Chemical | denotes | iPEDVPT-P96 | |
645 | 1037-1051 | Chemical | denotes | crystal violet | MESH:D005840 |
646 | 1102-1113 | Chemical | denotes | iPEDVPT-P96 | |
647 | 1118-1125 | Chemical | denotes | iPEDVPT | |
648 | 1126-1128 | Chemical | denotes | P5 | MESH:C016883 |
649 | 1158-1165 | Chemical | denotes | iPEDVPT | |
650 | 1166-1168 | Chemical | denotes | P5 | MESH:C016883 |
651 | 1179-1190 | Chemical | denotes | iPEDVPT-P96 | |
652 | 1191-1193 | Chemical | denotes | 5S | |
653 | 1231-1234 | Chemical | denotes | iP5 | |
654 | 1236-1246 | Chemical | denotes | iPEDVPT-P5 | |
655 | 1253-1263 | Chemical | denotes | iPEDVPT-P5 | |
656 | 1273-1284 | Chemical | denotes | iPEDVPT-P96 | |
657 | 1285-1287 | Chemical | denotes | 5S | |
658 | 1289-1293 | Chemical | denotes | iP96 | |
659 | 1295-1306 | Chemical | denotes | iPEDVPT-P96 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T149 | 222-227 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T150 | 257-265 | Body_part | denotes | antibody | http://purl.org/sig/ont/fma/fma62871 |
T151 | 340-344 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
T152 | 706-711 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T153 | 870-875 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T154 | 892-898 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T155 | 971-976 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T25 | 409-414 | Body_part | denotes | Scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
T26 | 892-898 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T35 | 183-191 | Disease | denotes | diarrhea | http://purl.obolibrary.org/obo/MONDO_0001673 |
T36 | 279-288 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T37 | 718-727 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T38 | 747-756 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T39 | 907-917 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T344 | 104-111 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
T345 | 114-115 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T346 | 192-197 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T347 | 217-221 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
T348 | 217-221 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
T349 | 222-227 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T350 | 269-271 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
T351 | 317-324 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
T352 | 340-344 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
T353 | 425-431 | http://purl.obolibrary.org/obo/PR_000010213 | denotes | m. (B) |
T354 | 457-466 | http://purl.obolibrary.org/obo/CL_0000228 | denotes | syncytium |
T355 | 530-534 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
T356 | 690-697 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
T357 | 701-705 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
T358 | 701-705 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
T359 | 706-711 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T360 | 865-869 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
T361 | 865-869 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
T362 | 870-875 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T363 | 966-970 | http://purl.obolibrary.org/obo/CLO_0009524 | denotes | Vero |
T364 | 966-970 | http://purl.obolibrary.org/obo/CLO_0050515 | denotes | Vero |
T365 | 971-976 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T366 | 996-1003 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
T367 | 1169-1174 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T134 | 446-452 | Chemical | denotes | nuclei | http://purl.obolibrary.org/obo/CHEBI_33252 |
T135 | 1037-1051 | Chemical | denotes | crystal violet | http://purl.obolibrary.org/obo/CHEBI_41688 |
T136 | 1052-1060 | Chemical | denotes | solution | http://purl.obolibrary.org/obo/CHEBI_75958 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T84 | 659-665 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | Growth |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T221 | 296-408 | Sentence | denotes | Note the recombinant viruses carrying spike gene derived from the attenuated iPEDVPT-P96 showed larger syncytia. |
T222 | 409-569 | Sentence | denotes | Scale Bar = 50 μm. (B) The number of nuclei per syncytium was quantified and assessed statistically using Kruskal–Wallis test after immunofluorescence staining. |
T223 | 570-778 | Sentence | denotes | Statistical differences (p < 0.05) among groups were indicated by different letters. (C) Growth kinetics of recombinant viruses in Vero cells after infection at multiplicity of infection (MOI) of 1 and 0.001. |
T224 | 779-1004 | Sentence | denotes | Supernatant were collected at indicated time points and the titers were quantified in Vero cells by standard 50% tissue-culture infectious dose (TCID50) assay. (D) Plaque morphologies in Vero cells of the recombinant viruses. |
T225 | 1005-1074 | Sentence | denotes | The plates were stained with 1% crystal violet solution after 72 HPI. |
T226 | 1075-1307 | Sentence | denotes | Note that comparing to the iPEDVPT-P96 and iPEDVPT-P5-96S, the plaques produced by iPEDVPT-P5 virus and iPEDVPT-P96-5S were barely visible macroscopically. iP5: iPEDVPT-P5; 96S: iPEDVPT-P5-96S; 5S, iPEDVPT-P96-5S; iP96, iPEDVPT-P96. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T24 | 183-191 | Phenotype | denotes | diarrhea | http://purl.obolibrary.org/obo/HP_0002014 |