PMC:7019868 / 17494-18550
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 315 | 57-61 | Species | denotes | PEDV | Tax:28295 |
| 316 | 197-201 | Species | denotes | PEDV | Tax:28295 |
| 317 | 115-122 | Chemical | denotes | iPEDVPT | |
| 318 | 393-400 | Chemical | denotes | iPEDVPT | |
| 319 | 450-457 | Chemical | denotes | iPEDVPT | |
| 320 | 689-696 | Chemical | denotes | iPEDVPT | |
| 321 | 697-699 | Chemical | denotes | P5 | MESH:C016883 |
| 322 | 704-711 | Chemical | denotes | iPEDVPT | |
| 323 | 933-943 | Chemical | denotes | iPEDVPT-P5 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T87 | 265-269 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T88 | 510-514 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T89 | 763-773 | Body_part | denotes | nucleotide | http://purl.org/sig/ont/fma/fma82740 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T176 | 27-28 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T177 | 94-95 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T178 | 108-113 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T179 | 210-212 | http://purl.obolibrary.org/obo/CLO_0001407 | denotes | 52 |
| T180 | 265-269 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T181 | 382-384 | http://purl.obolibrary.org/obo/CLO_0001407 | denotes | 52 |
| T182 | 422-429 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T183 | 510-514 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T184 | 536-538 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T185 | 596-603 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T186 | 741-742 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T187 | 1014-1015 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T102 | 763-773 | Chemical | denotes | nucleotide | http://purl.obolibrary.org/obo/CHEBI_36976 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T131 | 0-237 | Sentence | denotes | We have recently developed a reverse genetic platform of PEDV and have successfully generated a recombinant virus, iPEDVPT-P96, which is phenotypically comparable to its parental attenuated Taiwan PEDV-Pintung 52 strain, PEDVPT-P96 [19]. |
| T132 | 238-540 | Sentence | denotes | To study the role of the S gene in the attenuation mechanism of PEDVPT-P96, we further generated the recombinant, highly virulent Taiwan PEDVPT 52 strain, iPEDVPT-P5, and two chimeric viruses (iPEDVPT-P5-96S and iPEDVPT-P96-5S) by replacing the complete sequence of the S gene reciprocally (Figure S1). |
| T133 | 541-657 | Sentence | denotes | In general, the approach to rescue the new recombinant viruses were virtually the same as published previously [19]. |
| T134 | 658-893 | Sentence | denotes | However, for the generation of iPEDVPT-P5 and iPEDVPT-P5-96S, we split the plasmid B to two fragments at nucleotide position of 9654 according to Hou et al. [23] in order to compensate for the instability caused by the toxic sequences. |
| T135 | 894-1056 | Sentence | denotes | The in vitro and in vivo properties of iPEDVPT-P5 were confirmed similarly to those of the parental PEDVPT-P5 strain in a seven-day-old conventional piglet model. |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 31905842-28490591-144353228 | 816-818 | 28490591 | denotes | 23 |