PMC:7019868 / 15118-15694 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"264","span":{"begin":81,"end":84},"obj":"Species"},{"id":"265","span":{"begin":349,"end":357},"obj":"Chemical"},{"id":"266","span":{"begin":365,"end":373},"obj":"Chemical"},{"id":"267","span":{"begin":430,"end":441},"obj":"Chemical"},{"id":"268","span":{"begin":446,"end":451},"obj":"Chemical"},{"id":"269","span":{"begin":453,"end":456},"obj":"Chemical"}],"attributes":[{"id":"A264","pred":"tao:has_database_id","subj":"264","obj":"Tax:9823"},{"id":"A265","pred":"tao:has_database_id","subj":"265","obj":"MESH:D005557"},{"id":"A266","pred":"tao:has_database_id","subj":"266","obj":"MESH:D010232"},{"id":"A267","pred":"tao:has_database_id","subj":"267","obj":"MESH:D006416"},{"id":"A268","pred":"tao:has_database_id","subj":"268","obj":"MESH:D004801"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"At three days post-inoculation, three pigs from each virus-treated group and one pig from mock group were humanely euthanized by electrocution followed by exsanguination for histopathological and immunohistochemical assessments, as described previously [22]. Duodenum, jejunum, ileum, cecum, colon, rectum and mesenteric lymph nodes were collected, formalin-fixed, paraffin-embedded, sectioned at 4 μm, and stained routinely with hematoxylin and eosin (H\u0026E) for morphometric analysis by assessing the ratio of villi height to crypt depth blindly by one veterinary pathologist."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T73","span":{"begin":259,"end":267},"obj":"Body_part"},{"id":"T74","span":{"begin":269,"end":276},"obj":"Body_part"},{"id":"T75","span":{"begin":278,"end":283},"obj":"Body_part"},{"id":"T76","span":{"begin":285,"end":290},"obj":"Body_part"},{"id":"T77","span":{"begin":292,"end":297},"obj":"Body_part"},{"id":"T78","span":{"begin":299,"end":305},"obj":"Body_part"},{"id":"T79","span":{"begin":310,"end":332},"obj":"Body_part"}],"attributes":[{"id":"A73","pred":"fma_id","subj":"T73","obj":"http://purl.org/sig/ont/fma/fma7206"},{"id":"A74","pred":"fma_id","subj":"T74","obj":"http://purl.org/sig/ont/fma/fma7207"},{"id":"A75","pred":"fma_id","subj":"T75","obj":"http://purl.org/sig/ont/fma/fma7208"},{"id":"A76","pred":"fma_id","subj":"T76","obj":"http://purl.org/sig/ont/fma/fma14541"},{"id":"A77","pred":"fma_id","subj":"T77","obj":"http://purl.org/sig/ont/fma/fma14543"},{"id":"A78","pred":"fma_id","subj":"T78","obj":"http://purl.org/sig/ont/fma/fma14544"},{"id":"A79","pred":"fma_id","subj":"T79","obj":"http://purl.org/sig/ont/fma/fma277405"}],"text":"At three days post-inoculation, three pigs from each virus-treated group and one pig from mock group were humanely euthanized by electrocution followed by exsanguination for histopathological and immunohistochemical assessments, as described previously [22]. Duodenum, jejunum, ileum, cecum, colon, rectum and mesenteric lymph nodes were collected, formalin-fixed, paraffin-embedded, sectioned at 4 μm, and stained routinely with hematoxylin and eosin (H\u0026E) for morphometric analysis by assessing the ratio of villi height to crypt depth blindly by one veterinary pathologist."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T8","span":{"begin":259,"end":267},"obj":"Body_part"},{"id":"T9","span":{"begin":269,"end":276},"obj":"Body_part"},{"id":"T10","span":{"begin":278,"end":283},"obj":"Body_part"},{"id":"T11","span":{"begin":292,"end":297},"obj":"Body_part"},{"id":"T12","span":{"begin":299,"end":305},"obj":"Body_part"},{"id":"T13","span":{"begin":310,"end":332},"obj":"Body_part"},{"id":"T14","span":{"begin":321,"end":326},"obj":"Body_part"}],"attributes":[{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0002114"},{"id":"A9","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/UBERON_0002115"},{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0002116"},{"id":"A11","pred":"uberon_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/UBERON_0001155"},{"id":"A12","pred":"uberon_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/UBERON_0001052"},{"id":"A13","pred":"uberon_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/UBERON_0002509"},{"id":"A14","pred":"uberon_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/UBERON_0002391"}],"text":"At three days post-inoculation, three pigs from each virus-treated group and one pig from mock group were humanely euthanized by electrocution followed by exsanguination for histopathological and immunohistochemical assessments, as described previously [22]. Duodenum, jejunum, ileum, cecum, colon, rectum and mesenteric lymph nodes were collected, formalin-fixed, paraffin-embedded, sectioned at 4 μm, and stained routinely with hematoxylin and eosin (H\u0026E) for morphometric analysis by assessing the ratio of villi height to crypt depth blindly by one veterinary pathologist."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T157","span":{"begin":53,"end":58},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T158","span":{"begin":106,"end":114},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T159","span":{"begin":254,"end":256},"obj":"http://purl.obolibrary.org/obo/CLO_0050507"},{"id":"T160","span":{"begin":269,"end":276},"obj":"http://purl.obolibrary.org/obo/UBERON_0002115"},{"id":"T161","span":{"begin":278,"end":283},"obj":"http://purl.obolibrary.org/obo/UBERON_0002116"},{"id":"T162","span":{"begin":292,"end":297},"obj":"http://purl.obolibrary.org/obo/UBERON_0001155"},{"id":"T163","span":{"begin":299,"end":305},"obj":"http://purl.obolibrary.org/obo/UBERON_0001052"},{"id":"T164","span":{"begin":299,"end":305},"obj":"http://purl.obolibrary.org/obo/UBERON_0006866"},{"id":"T165","span":{"begin":310,"end":332},"obj":"http://purl.obolibrary.org/obo/UBERON_0002509"}],"text":"At three days post-inoculation, three pigs from each virus-treated group and one pig from mock group were humanely euthanized by electrocution followed by exsanguination for histopathological and immunohistochemical assessments, as described previously [22]. Duodenum, jejunum, ileum, cecum, colon, rectum and mesenteric lymph nodes were collected, formalin-fixed, paraffin-embedded, sectioned at 4 μm, and stained routinely with hematoxylin and eosin (H\u0026E) for morphometric analysis by assessing the ratio of villi height to crypt depth blindly by one veterinary pathologist."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T84","span":{"begin":67,"end":72},"obj":"Chemical"},{"id":"T85","span":{"begin":95,"end":100},"obj":"Chemical"},{"id":"T86","span":{"begin":430,"end":441},"obj":"Chemical"}],"attributes":[{"id":"A84","pred":"chebi_id","subj":"T84","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A85","pred":"chebi_id","subj":"T85","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"},{"id":"A86","pred":"chebi_id","subj":"T86","obj":"http://purl.obolibrary.org/obo/CHEBI_51686"}],"text":"At three days post-inoculation, three pigs from each virus-treated group and one pig from mock group were humanely euthanized by electrocution followed by exsanguination for histopathological and immunohistochemical assessments, as described previously [22]. Duodenum, jejunum, ileum, cecum, colon, rectum and mesenteric lymph nodes were collected, formalin-fixed, paraffin-embedded, sectioned at 4 μm, and stained routinely with hematoxylin and eosin (H\u0026E) for morphometric analysis by assessing the ratio of villi height to crypt depth blindly by one veterinary pathologist."}

{"project":"LitCovid-sentences","denotations":[{"id":"T113","span":{"begin":0,"end":258},"obj":"Sentence"},{"id":"T114","span":{"begin":259,"end":576},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"At three days post-inoculation, three pigs from each virus-treated group and one pig from mock group were humanely euthanized by electrocution followed by exsanguination for histopathological and immunohistochemical assessments, as described previously [22]. Duodenum, jejunum, ileum, cecum, colon, rectum and mesenteric lymph nodes were collected, formalin-fixed, paraffin-embedded, sectioned at 4 μm, and stained routinely with hematoxylin and eosin (H\u0026E) for morphometric analysis by assessing the ratio of villi height to crypt depth blindly by one veterinary pathologist."}

{"project":"2_test","denotations":[{"id":"31905842-30089548-144353227","span":{"begin":254,"end":256},"obj":"30089548"}],"text":"At three days post-inoculation, three pigs from each virus-treated group and one pig from mock group were humanely euthanized by electrocution followed by exsanguination for histopathological and immunohistochemical assessments, as described previously [22]. Duodenum, jejunum, ileum, cecum, colon, rectum and mesenteric lymph nodes were collected, formalin-fixed, paraffin-embedded, sectioned at 4 μm, and stained routinely with hematoxylin and eosin (H\u0026E) for morphometric analysis by assessing the ratio of villi height to crypt depth blindly by one veterinary pathologist."}