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PMC:7014672 / 8092-9506 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
103 200-209 Species denotes 2019-nCoV Tax:2697049
104 261-270 Species denotes 2019-nCoV Tax:2697049
105 320-329 Species denotes 2019-nCoV Tax:2697049
106 395-399 Disease denotes SARS MESH:D045169
107 451-455 Disease denotes SARS MESH:D045169
108 514-518 Disease denotes SARS MESH:D045169
109 577-581 Disease denotes SARS MESH:D045169
110 638-642 Disease denotes SARS MESH:D045169
111 702-706 Disease denotes SARS MESH:D045169
112 768-772 Disease denotes MERS MESH:D018352
113 838-842 Disease denotes MERS MESH:D018352
114 902-906 Disease denotes MERS MESH:D018352
115 981-985 Disease denotes MERS MESH:D018352
117 42-55 Species denotes coronaviruses Tax:11118
124 1084-1093 Species denotes 2019-nCoV Tax:2697049
125 1095-1117 Species denotes 2019 novel coronavirus Tax:2697049
126 1119-1123 Disease denotes SARS MESH:D045169
127 1125-1158 Disease denotes severe acute respiratory syndrome MESH:D045169
128 1184-1188 Disease denotes MERS MESH:D018352
129 1190-1222 Disease denotes Middle East respiratory syndrome MESH:D018352

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T22 395-399 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T23 451-455 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T24 514-518 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T25 577-581 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T26 638-642 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T27 702-706 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T28 1089-1099 Disease denotes nCoV: 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T29 1119-1123 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T30 1125-1158 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T32 86-91 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T33 697-699 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T34 1224-1225 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T35 1290-1291 http://purl.obolibrary.org/obo/CLO_0001021 denotes b

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T8 428-430 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T9 498-501 Chemical denotes Lau http://purl.obolibrary.org/obo/CHEBI_32359
T10 548-550 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T11 558-560 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T12 561-564 Chemical denotes Lau http://purl.obolibrary.org/obo/CHEBI_32359
T13 609-611 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T14 619-621 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T15 622-625 Chemical denotes Lau http://purl.obolibrary.org/obo/CHEBI_32359
T16 669-671 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T17 679-681 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T18 877-879 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T19 1065-1067 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T20 1160-1162 Chemical denotes SD http://purl.obolibrary.org/obo/CHEBI_74807
T21 1389-1391 Chemical denotes SD http://purl.obolibrary.org/obo/CHEBI_74807

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T72 0-78 Sentence denotes Table 3 Estimated incubation periods for coronaviruses from different studies
T73 79-152 Sentence denotes Study Virus(location) Distribution Mean (days) 95th percentile (days)
T74 153-187 Sentence denotes Estimate 95% CI Estimate 95% CI
T75 188-248 Sentence denotes This study 2019-nCoV Weibull 6.4 5.6–7.7 10.3 8.6–14.1
T76 249-307 Sentence denotes This study 2019-nCoV Gamma 6.5 5.6–7.9 11.3 9.1–15.7
T77 308-370 Sentence denotes This study 2019-nCoV Lognormal 6.8 5.7–8.8 13.3 9.9–20.5
T78 371-430 Sentence denotes Donnelly, 2003 [14,15] SARS Gamma 3.8 3.0–4.9 9.45 NA
T79 431-497 Sentence denotes Cowling, 2007 [16] SARS Lognormal 5.1 4.6–5.5 12.9 11.7–14.5
T80 498-560 Sentence denotes Lau, 2010 [17] SARS (Hong Kong) Lognormal 4.4 NA 12.4 NA
T81 561-621 Sentence denotes Lau, 2010 [17] SARS (Beijing) Lognormal 5.7 NA 19.7 NA
T82 622-681 Sentence denotes Lau, 2010 [17] SARS (Taiwan) Lognormal 6.9 NA 17.9 NA
T83 682-748 Sentence denotes Lessler, 2009 [18] SARS Lognormal 4.8a 3.6–4.4 10.6 8.9–12.2
T84 749-815 Sentence denotes Assiri, 2013 [19] MERS Lognormal 6.0b 1.9–14.7 12.4 7.3–17.5
T85 816-879 Sentence denotes Cauchemez, 2014 [20] MERS Lognormal 5.5 3.6–10.2 10.2c NA
T86 880-958 Sentence denotes Virlogeux, 2016 [21] MERS (South Korea) Gamma 6.9 6.3–7.5 12.7 11.5–14.4
T87 959-1041 Sentence denotes Virlogeux, 2016 [21] MERS (Saudi Arabia) Lognormal 5.0 4.0–6.6 11.4 8.5–17.5
T88 1042-1094 Sentence denotes CI: credible interval; NA: not available; 2019-nCoV:
T89 1095-1189 Sentence denotes 2019 novel coronavirus; SARS; severe acute respiratory syndrome; SD: standard deviation; MERS:
T90 1190-1223 Sentence denotes Middle East respiratory syndrome.
T91 1224-1289 Sentence denotes a Value calculated from median of 4.0 days provided in reference.
T92 1290-1355 Sentence denotes b Value calculated from median of 5.2 days provided in reference.
T93 1356-1414 Sentence denotes c Value calculated from mean and SD provided in reference.

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T42 42-55 NCBITaxon:11118 denotes coronaviruses

2_test

Id Subject Object Predicate Lexical cue
32046819-12781533-29333935 387-389 12781533 denotes 14
32046819-17235210-29333936 446-448 17235210 denotes 16
32046819-20205928-29333937 509-511 20205928 denotes 17
32046819-20205928-29333938 572-574 20205928 denotes 17
32046819-20205928-29333939 633-635 20205928 denotes 17
32046819-19393959-29333940 697-699 19393959 denotes 18
32046819-23782161-29333941 763-765 23782161 denotes 19
32046819-24239323-29333942 833-835 24239323 denotes 20
32046819-27775012-29333943 897-899 27775012 denotes 21
32046819-27775012-29333944 976-978 27775012 denotes 21

MyTest

Id Subject Object Predicate Lexical cue
32046819-12781533-29333935 387-389 12781533 denotes 14
32046819-17235210-29333936 446-448 17235210 denotes 16
32046819-20205928-29333937 509-511 20205928 denotes 17
32046819-20205928-29333938 572-574 20205928 denotes 17
32046819-20205928-29333939 633-635 20205928 denotes 17
32046819-19393959-29333940 697-699 19393959 denotes 18
32046819-23782161-29333941 763-765 23782161 denotes 19
32046819-24239323-29333942 833-835 24239323 denotes 20
32046819-27775012-29333943 897-899 27775012 denotes 21
32046819-27775012-29333944 976-978 27775012 denotes 21