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PMC:7014672 / 7334-9837 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
76 14-36 Species denotes 2019 novel coronavirus Tax:2697049
77 109-122 Species denotes coronaviruses Tax:11118
78 38-71 Disease denotes severe acute respiratory syndrome MESH:D045169
79 76-108 Disease denotes Middle East respiratory syndrome MESH:D018352
85 536-545 Species denotes 2019-nCoV Tax:2697049
86 208-212 Disease denotes MERS MESH:D018352
87 430-434 Disease denotes SARS MESH:D045169
88 667-671 Disease denotes MERS MESH:D018352
89 675-679 Disease denotes SARS MESH:D045169
103 958-967 Species denotes 2019-nCoV Tax:2697049
104 1019-1028 Species denotes 2019-nCoV Tax:2697049
105 1078-1087 Species denotes 2019-nCoV Tax:2697049
106 1153-1157 Disease denotes SARS MESH:D045169
107 1209-1213 Disease denotes SARS MESH:D045169
108 1272-1276 Disease denotes SARS MESH:D045169
109 1335-1339 Disease denotes SARS MESH:D045169
110 1396-1400 Disease denotes SARS MESH:D045169
111 1460-1464 Disease denotes SARS MESH:D045169
112 1526-1530 Disease denotes MERS MESH:D018352
113 1596-1600 Disease denotes MERS MESH:D018352
114 1660-1664 Disease denotes MERS MESH:D018352
115 1739-1743 Disease denotes MERS MESH:D018352
117 800-813 Species denotes coronaviruses Tax:11118
124 1842-1851 Species denotes 2019-nCoV Tax:2697049
125 1853-1875 Species denotes 2019 novel coronavirus Tax:2697049
126 1877-1881 Disease denotes SARS MESH:D045169
127 1883-1916 Disease denotes severe acute respiratory syndrome MESH:D045169
128 1942-1946 Disease denotes MERS MESH:D018352
129 1948-1980 Disease denotes Middle East respiratory syndrome MESH:D018352
131 2241-2254 Species denotes coronaviruses Tax:11118
138 2278-2287 Species denotes 2019-nCoV Tax:2697049
139 2289-2311 Species denotes 2019 novel coronavirus Tax:2697049
140 2313-2317 Disease denotes SARS MESH:D045169
141 2319-2352 Disease denotes severe acute respiratory syndrome MESH:D045169
142 2354-2358 Disease denotes MERS MESH:D018352
143 2360-2392 Disease denotes Middle East respiratory syndrome MESH:D018352

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T19 38-71 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T20 430-434 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T21 675-679 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T22 1153-1157 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T23 1209-1213 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T24 1272-1276 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T25 1335-1339 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T26 1396-1400 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T27 1460-1464 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T28 1847-1857 Disease denotes nCoV: 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T29 1877-1881 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T30 1883-1916 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T31 2283-2293 Disease denotes nCoV: 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T32 2313-2317 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T33 2319-2352 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T30 143-144 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T31 719-720 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T32 844-849 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Virus
T33 1455-1457 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T34 1982-1983 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T35 2048-2049 http://purl.obolibrary.org/obo/CLO_0001021 denotes b

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T8 1186-1188 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T9 1256-1259 Chemical denotes Lau http://purl.obolibrary.org/obo/CHEBI_32359
T10 1306-1308 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T11 1316-1318 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T12 1319-1322 Chemical denotes Lau http://purl.obolibrary.org/obo/CHEBI_32359
T13 1367-1369 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T14 1377-1379 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T15 1380-1383 Chemical denotes Lau http://purl.obolibrary.org/obo/CHEBI_32359
T16 1427-1429 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T17 1437-1439 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T18 1635-1637 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T19 1823-1825 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T20 1918-1920 Chemical denotes SD http://purl.obolibrary.org/obo/CHEBI_74807
T21 2147-2149 Chemical denotes SD http://purl.obolibrary.org/obo/CHEBI_74807

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T68 0-142 Sentence denotes Comparison of 2019 novel coronavirus, severe acute respiratory syndrome and Middle East respiratory syndrome coronaviruses’ incubation periods
T69 143-387 Sentence denotes A comparison to the estimated incubation period distribution for MERS (Table 3 and Figure 3) shows that the incubation period values are remarkably similar, with mean values differing at most 1 day and 95th percentiles differing at most 2 days.
T70 388-546 Sentence denotes The estimated mean incubation periods for SARS are more variable between studies, including values shorter and longer than those presented here for 2019-nCoV.
T71 547-757 Sentence denotes These findings imply that the findings of previous studies that have assumed incubation period distributions similar to MERS or SARS will not have to be adapted because of a shorter or longer incubation period.
T72 758-836 Sentence denotes Table 3 Estimated incubation periods for coronaviruses from different studies
T73 837-910 Sentence denotes Study Virus(location) Distribution Mean (days) 95th percentile (days)
T74 911-945 Sentence denotes Estimate 95% CI Estimate 95% CI
T75 946-1006 Sentence denotes This study 2019-nCoV Weibull 6.4 5.6–7.7 10.3 8.6–14.1
T76 1007-1065 Sentence denotes This study 2019-nCoV Gamma 6.5 5.6–7.9 11.3 9.1–15.7
T77 1066-1128 Sentence denotes This study 2019-nCoV Lognormal 6.8 5.7–8.8 13.3 9.9–20.5
T78 1129-1188 Sentence denotes Donnelly, 2003 [14,15] SARS Gamma 3.8 3.0–4.9 9.45 NA
T79 1189-1255 Sentence denotes Cowling, 2007 [16] SARS Lognormal 5.1 4.6–5.5 12.9 11.7–14.5
T80 1256-1318 Sentence denotes Lau, 2010 [17] SARS (Hong Kong) Lognormal 4.4 NA 12.4 NA
T81 1319-1379 Sentence denotes Lau, 2010 [17] SARS (Beijing) Lognormal 5.7 NA 19.7 NA
T82 1380-1439 Sentence denotes Lau, 2010 [17] SARS (Taiwan) Lognormal 6.9 NA 17.9 NA
T83 1440-1506 Sentence denotes Lessler, 2009 [18] SARS Lognormal 4.8a 3.6–4.4 10.6 8.9–12.2
T84 1507-1573 Sentence denotes Assiri, 2013 [19] MERS Lognormal 6.0b 1.9–14.7 12.4 7.3–17.5
T85 1574-1637 Sentence denotes Cauchemez, 2014 [20] MERS Lognormal 5.5 3.6–10.2 10.2c NA
T86 1638-1716 Sentence denotes Virlogeux, 2016 [21] MERS (South Korea) Gamma 6.9 6.3–7.5 12.7 11.5–14.4
T87 1717-1799 Sentence denotes Virlogeux, 2016 [21] MERS (Saudi Arabia) Lognormal 5.0 4.0–6.6 11.4 8.5–17.5
T88 1800-1852 Sentence denotes CI: credible interval; NA: not available; 2019-nCoV:
T89 1853-1947 Sentence denotes 2019 novel coronavirus; SARS; severe acute respiratory syndrome; SD: standard deviation; MERS:
T90 1948-1981 Sentence denotes Middle East respiratory syndrome.
T91 1982-2047 Sentence denotes a Value calculated from median of 4.0 days provided in reference.
T92 2048-2113 Sentence denotes b Value calculated from median of 5.2 days provided in reference.
T93 2114-2172 Sentence denotes c Value calculated from mean and SD provided in reference.
T94 2173-2277 Sentence denotes Figure 3 Box-and-whisker-plots of estimated incubation periods for coronaviruses from different studies
T95 2278-2288 Sentence denotes 2019-nCoV:
T96 2289-2359 Sentence denotes 2019 novel coronavirus; SARS; severe acute respiratory syndrome; MERS:
T97 2360-2393 Sentence denotes Middle East respiratory syndrome.
T98 2394-2503 Sentence denotes Median (black point), interquartile range (box), and maximum of 1.5 times the interquartile range (whiskers).

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T42 800-813 NCBITaxon:11118 denotes coronaviruses
T41 2241-2254 NCBITaxon:11118 denotes coronaviruses
T29 208-212 SP_9 denotes MERS
T28 430-434 SP_10 denotes SARS
T27 536-545 SP_7 denotes 2019-nCoV
T26 667-671 SP_9 denotes MERS
T25 675-679 SP_10 denotes SARS

2_test

Id Subject Object Predicate Lexical cue
32046819-12781533-29333935 1145-1147 12781533 denotes 14
32046819-17235210-29333936 1204-1206 17235210 denotes 16
32046819-20205928-29333937 1267-1269 20205928 denotes 17
32046819-20205928-29333938 1330-1332 20205928 denotes 17
32046819-20205928-29333939 1391-1393 20205928 denotes 17
32046819-19393959-29333940 1455-1457 19393959 denotes 18
32046819-23782161-29333941 1521-1523 23782161 denotes 19
32046819-24239323-29333942 1591-1593 24239323 denotes 20
32046819-27775012-29333943 1655-1657 27775012 denotes 21
32046819-27775012-29333944 1734-1736 27775012 denotes 21

MyTest

Id Subject Object Predicate Lexical cue
32046819-12781533-29333935 1145-1147 12781533 denotes 14
32046819-17235210-29333936 1204-1206 17235210 denotes 16
32046819-20205928-29333937 1267-1269 20205928 denotes 17
32046819-20205928-29333938 1330-1332 20205928 denotes 17
32046819-20205928-29333939 1391-1393 20205928 denotes 17
32046819-19393959-29333940 1455-1457 19393959 denotes 18
32046819-23782161-29333941 1521-1523 23782161 denotes 19
32046819-24239323-29333942 1591-1593 24239323 denotes 20
32046819-27775012-29333943 1655-1657 27775012 denotes 21
32046819-27775012-29333944 1734-1736 27775012 denotes 21