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LitCovid-PubTator

LitCovid-PD-MONDO

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T7","span":{"begin":325,"end":358},"obj":"Disease"},{"id":"T8","span":{"begin":360,"end":364},"obj":"Disease"},{"id":"T9","span":{"begin":461,"end":475},"obj":"Disease"},{"id":"T10","span":{"begin":466,"end":475},"obj":"Disease"},{"id":"T11","span":{"begin":587,"end":591},"obj":"Disease"},{"id":"T12","span":{"begin":744,"end":758},"obj":"Disease"},{"id":"T13","span":{"begin":749,"end":758},"obj":"Disease"},{"id":"T14","span":{"begin":1134,"end":1148},"obj":"Disease"},{"id":"T15","span":{"begin":1139,"end":1148},"obj":"Disease"},{"id":"T16","span":{"begin":1337,"end":1341},"obj":"Disease"},{"id":"T17","span":{"begin":1549,"end":1558},"obj":"Disease"}],"attributes":[{"id":"A7","pred":"mondo_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A8","pred":"mondo_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A9","pred":"mondo_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/MONDO_0005460"},{"id":"A10","pred":"mondo_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/MONDO_0005812"},{"id":"A11","pred":"mondo_id","subj":"T11","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A12","pred":"mondo_id","subj":"T12","obj":"http://purl.obolibrary.org/obo/MONDO_0005460"},{"id":"A13","pred":"mondo_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/MONDO_0005812"},{"id":"A14","pred":"mondo_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/MONDO_0005460"},{"id":"A15","pred":"mondo_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/MONDO_0005812"},{"id":"A16","pred":"mondo_id","subj":"T16","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A17","pred":"mondo_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"We reviewed the epidemiological characteristics of 2019-nCoV. The estimated reproductive number of 0.3 was obtained from a small number of infected persons with imperfect information in the very early stages of the outbreak [8]; therefore the reproductive number of 2019-nCoV is likely to be similar to that of the 2002/2003 severe acute respiratory syndrome (SARS) coronavirus during the pre-intervention period (range, 2 to 3) and that of the 2009 pandemic A/H1N1 influenza virus in the United States (range, 1.3 to 1.7) [13-15]. The incubation period is likely similar to that of the SARS coronavirus, but with a wider confidence interval (mean, 4.8 days; 95% CI, 4.2 to 5.5) [16]. Furthermore, it is longer than that of the 2009 pandemic A/H1N1 influenza virus (median incubation period, 1.4 days; 95% CI, 1.0 to 1.8) [17]. Therefore, the evidence reviewed above shows that the current control measures for 2019-nCoV, including a quarantine and observation period of 14 days for suspected cases, can be considered appropriate [10]. The generation time and serial interval of 2019-nCoV are longer than those of the 2009 pandemic A/H1N1 influenza virus (median generation time, 2.7 days; 95% CI, 2.0 to 3.5; and mean serial interval: range, 2.6 to 3.2) [14,18]. However, the mean serial interval of 2019-nCoV is similar to that of the SARS coronavirus (mean, 8.4 days; standard deviation, 3.8) [19]. The overall case fatality rate of 2019-nCoV was estimated by international experts to range from 3% to 14% [15,20], and it is more likely to cause infection in older age groups with commodities [2]."}

LitCovid-PD-CLO

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T18","span":{"begin":121,"end":122},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T19","span":{"begin":459,"end":460},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T20","span":{"begin":476,"end":481},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T21","span":{"begin":614,"end":615},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T22","span":{"begin":742,"end":743},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T23","span":{"begin":759,"end":764},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T24","span":{"begin":932,"end":933},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T25","span":{"begin":1132,"end":1133},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T26","span":{"begin":1149,"end":1154},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"}],"text":"We reviewed the epidemiological characteristics of 2019-nCoV. The estimated reproductive number of 0.3 was obtained from a small number of infected persons with imperfect information in the very early stages of the outbreak [8]; therefore the reproductive number of 2019-nCoV is likely to be similar to that of the 2002/2003 severe acute respiratory syndrome (SARS) coronavirus during the pre-intervention period (range, 2 to 3) and that of the 2009 pandemic A/H1N1 influenza virus in the United States (range, 1.3 to 1.7) [13-15]. The incubation period is likely similar to that of the SARS coronavirus, but with a wider confidence interval (mean, 4.8 days; 95% CI, 4.2 to 5.5) [16]. Furthermore, it is longer than that of the 2009 pandemic A/H1N1 influenza virus (median incubation period, 1.4 days; 95% CI, 1.0 to 1.8) [17]. Therefore, the evidence reviewed above shows that the current control measures for 2019-nCoV, including a quarantine and observation period of 14 days for suspected cases, can be considered appropriate [10]. The generation time and serial interval of 2019-nCoV are longer than those of the 2009 pandemic A/H1N1 influenza virus (median generation time, 2.7 days; 95% CI, 2.0 to 3.5; and mean serial interval: range, 2.6 to 3.2) [14,18]. However, the mean serial interval of 2019-nCoV is similar to that of the SARS coronavirus (mean, 8.4 days; standard deviation, 3.8) [19]. The overall case fatality rate of 2019-nCoV was estimated by international experts to range from 3% to 14% [15,20], and it is more likely to cause infection in older age groups with commodities [2]."}

LitCovid-sentences

{"project":"LitCovid-sentences","denotations":[{"id":"T37","span":{"begin":0,"end":61},"obj":"Sentence"},{"id":"T38","span":{"begin":62,"end":531},"obj":"Sentence"},{"id":"T39","span":{"begin":532,"end":684},"obj":"Sentence"},{"id":"T40","span":{"begin":685,"end":827},"obj":"Sentence"},{"id":"T41","span":{"begin":828,"end":1035},"obj":"Sentence"},{"id":"T42","span":{"begin":1036,"end":1263},"obj":"Sentence"},{"id":"T43","span":{"begin":1264,"end":1401},"obj":"Sentence"},{"id":"T44","span":{"begin":1402,"end":1600},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"We reviewed the epidemiological characteristics of 2019-nCoV. The estimated reproductive number of 0.3 was obtained from a small number of infected persons with imperfect information in the very early stages of the outbreak [8]; therefore the reproductive number of 2019-nCoV is likely to be similar to that of the 2002/2003 severe acute respiratory syndrome (SARS) coronavirus during the pre-intervention period (range, 2 to 3) and that of the 2009 pandemic A/H1N1 influenza virus in the United States (range, 1.3 to 1.7) [13-15]. The incubation period is likely similar to that of the SARS coronavirus, but with a wider confidence interval (mean, 4.8 days; 95% CI, 4.2 to 5.5) [16]. Furthermore, it is longer than that of the 2009 pandemic A/H1N1 influenza virus (median incubation period, 1.4 days; 95% CI, 1.0 to 1.8) [17]. Therefore, the evidence reviewed above shows that the current control measures for 2019-nCoV, including a quarantine and observation period of 14 days for suspected cases, can be considered appropriate [10]. The generation time and serial interval of 2019-nCoV are longer than those of the 2009 pandemic A/H1N1 influenza virus (median generation time, 2.7 days; 95% CI, 2.0 to 3.5; and mean serial interval: range, 2.6 to 3.2) [14,18]. However, the mean serial interval of 2019-nCoV is similar to that of the SARS coronavirus (mean, 8.4 days; standard deviation, 3.8) [19]. The overall case fatality rate of 2019-nCoV was estimated by international experts to range from 3% to 14% [15,20], and it is more likely to cause infection in older age groups with commodities [2]."}

MyTest

{"project":"MyTest","denotations":[{"id":"32023775-15353409-28529419","span":{"begin":524,"end":526},"obj":"15353409"},{"id":"32023775-19745114-28529419","span":{"begin":524,"end":526},"obj":"19745114"},{"id":"32023775-15503397-28529420","span":{"begin":680,"end":682},"obj":"15503397"},{"id":"32023775-20042754-28529421","span":{"begin":823,"end":825},"obj":"20042754"},{"id":"32023775-19745114-28529422","span":{"begin":1256,"end":1258},"obj":"19745114"},{"id":"32023775-19744314-28529423","span":{"begin":1259,"end":1261},"obj":"19744314"},{"id":"32023775-12766207-28529424","span":{"begin":1397,"end":1399},"obj":"12766207"}],"namespaces":[{"prefix":"_base","uri":"https://www.uniprot.org/uniprot/testbase"},{"prefix":"UniProtKB","uri":"https://www.uniprot.org/uniprot/"},{"prefix":"uniprot","uri":"https://www.uniprot.org/uniprotkb/"}],"text":"We reviewed the epidemiological characteristics of 2019-nCoV. The estimated reproductive number of 0.3 was obtained from a small number of infected persons with imperfect information in the very early stages of the outbreak [8]; therefore the reproductive number of 2019-nCoV is likely to be similar to that of the 2002/2003 severe acute respiratory syndrome (SARS) coronavirus during the pre-intervention period (range, 2 to 3) and that of the 2009 pandemic A/H1N1 influenza virus in the United States (range, 1.3 to 1.7) [13-15]. The incubation period is likely similar to that of the SARS coronavirus, but with a wider confidence interval (mean, 4.8 days; 95% CI, 4.2 to 5.5) [16]. Furthermore, it is longer than that of the 2009 pandemic A/H1N1 influenza virus (median incubation period, 1.4 days; 95% CI, 1.0 to 1.8) [17]. Therefore, the evidence reviewed above shows that the current control measures for 2019-nCoV, including a quarantine and observation period of 14 days for suspected cases, can be considered appropriate [10]. The generation time and serial interval of 2019-nCoV are longer than those of the 2009 pandemic A/H1N1 influenza virus (median generation time, 2.7 days; 95% CI, 2.0 to 3.5; and mean serial interval: range, 2.6 to 3.2) [14,18]. However, the mean serial interval of 2019-nCoV is similar to that of the SARS coronavirus (mean, 8.4 days; standard deviation, 3.8) [19]. The overall case fatality rate of 2019-nCoV was estimated by international experts to range from 3% to 14% [15,20], and it is more likely to cause infection in older age groups with commodities [2]."}

2_test

{"project":"2_test","denotations":[{"id":"32023775-15353409-28529419","span":{"begin":524,"end":526},"obj":"15353409"},{"id":"32023775-19745114-28529419","span":{"begin":524,"end":526},"obj":"19745114"},{"id":"32023775-15503397-28529420","span":{"begin":680,"end":682},"obj":"15503397"},{"id":"32023775-20042754-28529421","span":{"begin":823,"end":825},"obj":"20042754"},{"id":"32023775-19745114-28529422","span":{"begin":1256,"end":1258},"obj":"19745114"},{"id":"32023775-19744314-28529423","span":{"begin":1259,"end":1261},"obj":"19744314"},{"id":"32023775-12766207-28529424","span":{"begin":1397,"end":1399},"obj":"12766207"}],"text":"We reviewed the epidemiological characteristics of 2019-nCoV. The estimated reproductive number of 0.3 was obtained from a small number of infected persons with imperfect information in the very early stages of the outbreak [8]; therefore the reproductive number of 2019-nCoV is likely to be similar to that of the 2002/2003 severe acute respiratory syndrome (SARS) coronavirus during the pre-intervention period (range, 2 to 3) and that of the 2009 pandemic A/H1N1 influenza virus in the United States (range, 1.3 to 1.7) [13-15]. The incubation period is likely similar to that of the SARS coronavirus, but with a wider confidence interval (mean, 4.8 days; 95% CI, 4.2 to 5.5) [16]. Furthermore, it is longer than that of the 2009 pandemic A/H1N1 influenza virus (median incubation period, 1.4 days; 95% CI, 1.0 to 1.8) [17]. Therefore, the evidence reviewed above shows that the current control measures for 2019-nCoV, including a quarantine and observation period of 14 days for suspected cases, can be considered appropriate [10]. The generation time and serial interval of 2019-nCoV are longer than those of the 2009 pandemic A/H1N1 influenza virus (median generation time, 2.7 days; 95% CI, 2.0 to 3.5; and mean serial interval: range, 2.6 to 3.2) [14,18]. However, the mean serial interval of 2019-nCoV is similar to that of the SARS coronavirus (mean, 8.4 days; standard deviation, 3.8) [19]. The overall case fatality rate of 2019-nCoV was estimated by international experts to range from 3% to 14% [15,20], and it is more likely to cause infection in older age groups with commodities [2]."}