PMC:7008073 / 672-1377
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T2 | 102-119 | Body_part | denotes | respiratory tract | http://purl.org/sig/ont/fma/fma265130 |
| T3 | 124-146 | Body_part | denotes | gastrointestinal tract | http://purl.org/sig/ont/fma/fma71132 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T2 | 102-119 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T8 | 147-157 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T9 | 281-289 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T10 | 347-356 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 45-56 | http://purl.obolibrary.org/obo/NCBITaxon_7742 | denotes | vertebrates |
| T5 | 67-72 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T6 | 124-146 | http://purl.obolibrary.org/obo/UBERON_0005409 | denotes | gastrointestinal tract |
| T7 | 164-169 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T8 | 304-311 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
| T9 | 449-450 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T10 | 541-542 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T11 | 560-561 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T12 | 634-635 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7 | 0-423 | Sentence | denotes | Coronaviruses (CoV) infect birds and several vertebrates including human, and predominantly cause the respiratory tract and gastrointestinal tract infections.1 Six human CoV (HCoV) have been identified, including four endemic (HCoV-OC43, -229E, -NL63, and -HKU1) and two epidemic (SARS-CoV and MERS-CoV) viruses.2 In December 2019, an outbreak of pneumonia of unknown etiology occurred in Wuhan city, Hubei Province, China. |
| T8 | 424-705 | Sentence | denotes | Most of the patients had a history of visiting the Huanan Seafood Wholesale Market.3 The Chinese scientists isolated a coronavirus from a patient, and phylogenetic analyses of the sequence showed it belongs to a new HCoV, which is designated as 2019 novel coronavirus (2019-nCoV).4 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T6 | 347-356 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 39 | 0-13 | Species | denotes | Coronaviruses | Tax:11118 |
| 40 | 15-18 | Species | denotes | CoV | Tax:11118 |
| 41 | 67-72 | Species | denotes | human | Tax:9606 |
| 42 | 164-169 | Species | denotes | human | Tax:9606 |
| 43 | 170-173 | Species | denotes | CoV | Tax:11118 |
| 44 | 227-236 | Species | denotes | HCoV-OC43 | Tax:31631 |
| 45 | 281-289 | Species | denotes | SARS-CoV | Tax:694009 |
| 46 | 294-302 | Species | denotes | MERS-CoV | Tax:1335626 |
| 47 | 436-444 | Species | denotes | patients | Tax:9606 |
| 48 | 543-554 | Species | denotes | coronavirus | Tax:11118 |
| 49 | 562-569 | Species | denotes | patient | Tax:9606 |
| 50 | 669-691 | Species | denotes | 2019 novel coronavirus | Tax:2697049 |
| 51 | 693-702 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 52 | 124-157 | Disease | denotes | gastrointestinal tract infections | MESH:D004067 |
| 53 | 347-356 | Disease | denotes | pneumonia | MESH:D011014 |