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PMC:7008073 / 672-1095 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 102-119 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T3 124-146 Body_part denotes gastrointestinal tract http://purl.org/sig/ont/fma/fma71132

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 102-119 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T8 147-157 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T9 281-289 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T10 347-356 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T4 45-56 http://purl.obolibrary.org/obo/NCBITaxon_7742 denotes vertebrates
T5 67-72 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T6 124-146 http://purl.obolibrary.org/obo/UBERON_0005409 denotes gastrointestinal tract
T7 164-169 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T8 304-311 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T7 0-423 Sentence denotes Coronaviruses (CoV) infect birds and several vertebrates including human, and predominantly cause the respiratory tract and gastrointestinal tract infections.1 Six human CoV (HCoV) have been identified, including four endemic (HCoV-OC43, -229E, -NL63, and -HKU1) and two epidemic (SARS-CoV and MERS-CoV) viruses.2 In December 2019, an outbreak of pneumonia of unknown etiology occurred in Wuhan city, Hubei Province, China.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T6 347-356 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
39 0-13 Species denotes Coronaviruses Tax:11118
40 15-18 Species denotes CoV Tax:11118
41 67-72 Species denotes human Tax:9606
42 164-169 Species denotes human Tax:9606
43 170-173 Species denotes CoV Tax:11118
44 227-236 Species denotes HCoV-OC43 Tax:31631
45 281-289 Species denotes SARS-CoV Tax:694009
46 294-302 Species denotes MERS-CoV Tax:1335626
52 124-157 Disease denotes gastrointestinal tract infections MESH:D004067
53 347-356 Disease denotes pneumonia MESH:D011014