PMC:7008073 / 5675-6421
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T21 | 239-245 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
| T22 | 257-262 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T23 | 299-303 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T24 | 337-342 | Body_part | denotes | chest | http://purl.org/sig/ont/fma/fma9576 |
| T25 | 396-400 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T18 | 239-245 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
| T19 | 257-262 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T20 | 299-303 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T21 | 337-342 | Body_part | denotes | chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
| T22 | 396-400 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T27 | 45-54 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T28 | 220-229 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T29 | 427-436 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T30 | 503-512 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T31 | 616-619 | Disease | denotes | flu | http://purl.obolibrary.org/obo/MONDO_0005812 |
| T32 | 642-651 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T33 | 695-704 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T34 | 734-743 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T64 | 257-262 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T65 | 299-303 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T66 | 299-303 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T67 | 337-342 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | chest |
| T68 | 396-400 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T69 | 396-400 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T37 | 0-137 | Sentence | denotes | It is important to note that the patient had pneumonia as early as three days after the symptom onset, although her condition was stable. |
| T38 | 138-355 | Sentence | denotes | During the first three days, she did not develop any clinical features suggesting pneumonia, such as sputum, pleuritic chest discomfort, hemoptysis, crackles on lung auscultation, and infiltrates in chest radiography. |
| T39 | 356-447 | Sentence | denotes | If we had not taken an HRCT scan of the lung, we would have missed the pneumonia diagnosis. |
| T40 | 448-581 | Sentence | denotes | This case highlights that the possibility of 2019-nCoV pneumonia cannot be excluded based only on the clinical clues mentioned above. |
| T41 | 582-746 | Sentence | denotes | This clinical feature, i.e., mild flu-like symptoms despite pneumonia during the first week of illness (“walking pneumonia”) resembles that of MERS-CoV pneumonia.78 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T22 | 45-54 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T23 | 220-229 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T24 | 275-285 | Phenotype | denotes | hemoptysis | http://purl.obolibrary.org/obo/HP_0002105 |
| T25 | 287-295 | Phenotype | denotes | crackles | http://purl.obolibrary.org/obo/HP_0030830 |
| T26 | 427-436 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T27 | 503-512 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T28 | 642-651 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T29 | 695-704 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T30 | 734-743 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 149 | 33-40 | Species | denotes | patient | Tax:9606 |
| 150 | 45-54 | Disease | denotes | pneumonia | MESH:D011014 |
| 151 | 220-229 | Disease | denotes | pneumonia | MESH:D011014 |
| 152 | 275-285 | Disease | denotes | hemoptysis | MESH:D006469 |
| 153 | 427-436 | Disease | denotes | pneumonia | MESH:D011014 |
| 154 | 493-512 | Disease | denotes | 2019-nCoV pneumonia | MESH:C000657245 |
| 155 | 642-651 | Disease | denotes | pneumonia | MESH:D011014 |
| 156 | 695-704 | Disease | denotes | pneumonia | MESH:D011014 |
| 157 | 730-743 | Disease | denotes | CoV pneumonia | MESH:C000657245 |