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PMC:7004396 / 6057-9706 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T125 41-50 SP_7 denotes 2019-nCoV
T124 218-227 SP_7 denotes 2019-nCoV
T123 549-554 NCBITaxon:10239 denotes virus
T122 689-694 NCBITaxon:10239 denotes virus
T121 1151-1160 SP_7 denotes 2019-nCoV
T120 1384-1394 GO:0065007 denotes regulatory
T119 2715-2722 NCBITaxon:1 denotes persons
T118 2909-2918 SP_7 denotes 2019-nCoV
T117 3423-3434 NCBITaxon:1 denotes individuals

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T18 1524-1534 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T47 23-26 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T48 39-40 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T49 116-119 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T50 120-129 http://purl.obolibrary.org/obo/CLO_0001658 denotes activated
T51 255-258 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T52 259-262 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T53 549-554 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T54 637-640 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T55 641-644 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T56 689-694 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T57 728-731 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T58 852-855 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T59 875-878 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T60 924-930 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T61 942-945 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T62 990-993 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T63 1051-1054 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T64 1062-1063 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T65 1182-1184 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T66 1186-1189 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T67 1197-1198 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T68 1326-1328 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T69 1368-1369 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T70 1673-1676 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T71 2218-2221 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T72 2359-2360 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T73 2418-2421 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T74 2698-2699 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T75 2797-2800 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T76 2889-2895 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T77 3580-3582 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 512-521 http://purl.obolibrary.org/obo/GO_0016032 denotes virulence
T4 512-521 http://purl.obolibrary.org/obo/GO_0009405 denotes virulence
T5 2339-2348 http://purl.obolibrary.org/obo/GO_0007585 denotes breathing

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T50 0-22 Sentence denotes Public Health Response
T51 23-100 Sentence denotes CDC established a 2019-nCoV Incident Management Structure on January 7, 2020.
T52 101-245 Sentence denotes On January 21, CDC activated its Emergency Operations Center to optimize coordination for domestic and international 2019-nCoV response efforts.
T53 246-555 Sentence denotes To date, CDC has deployed teams to the U.S. jurisdictions with cases to assist with epidemiologic investigation and to work closely with state and local partners to identify and monitor close contacts and better understand the spectrum of illness, transmission, and virulence associated with this novel virus.
T54 556-636 Sentence denotes Information learned from these investigations will help inform response actions.
T55 637-833 Sentence denotes CDC has closely monitored the global impact of this virus with staff members positioned in CDC offices around the world, including mainland China, and in coordination with other countries and WHO.
T56 834-976 Sentence denotes This coordination has included deploying CDC staff members to work with WHO and providing active support to CDC offices in affected countries.
T57 977-1170 Sentence denotes In addition, CDC in response to the escalating risks of travel from China has issued a series of Travelers’ Health Notices for both Wuhan and the rest of China regarding the 2019-nCoV outbreak.
T58 1171-1288 Sentence denotes On January 27, CDC issued a Level 3 travel notice for travelers to avoid all nonessential travel to mainland China.**
T59 1289-1472 Sentence denotes U.S. quarantine stations, located at 18 major U.S. ports of entry, are part of a comprehensive regulatory system authorized under section 361 of the Public Health Service Act (42 U.S.
T60 1473-1591 Sentence denotes Code Section 264), that limits the introduction of infectious diseases into the United States to prevent their spread.
T61 1592-1841 Sentence denotes On January 17, consistent with existing communicable disease response protocols, CDC Quarantine staff members instituted enhanced entry screening of travelers on direct and connecting flights from Wuhan, China, arriving at three major U.S. airports:
T62 1842-1994 Sentence denotes Los Angeles (LAX), New York City (JFK), and San Francisco (SFO),†† which then expanded to include travelers arriving in Atlanta (ATL) and Chicago (ORD).
T63 1995-2111 Sentence denotes These five airports together receive approximately 85% of all air travelers from Wuhan, China, to the United States.
T64 2112-2116 Sentence denotes U.S.
T65 2117-2673 Sentence denotes Customs and Border Protection officers identified travelers arriving from Wuhan and referred them to CDC for health screening.§§ Any traveler from Wuhan with signs or symptoms of illness (e.g., fever, cough, or difficulty breathing) received a more comprehensive public health assessment performed by CDC public health and medical officers.¶¶ All travelers from Wuhan were also provided CDC’s Travel Health Alert Notice (T-HAN)*** that advised them to monitor their health for 14 days and described recommended actions to take if relevant symptoms develop.
T66 2674-2919 Sentence denotes As of February 1, 2020, a total of 3,099 persons on 437 flights were screened; five symptomatic travelers were referred by CDC to local health care providers for further medical evaluation, and one of these persons tested positive for 2019-nCoV.
T67 2920-3161 Sentence denotes On January 24, 2020, travel bans began to be instituted by the Chinese government, resulting in restricted travel in and out of Hubei Province, including the city of Wuhan, and fewer travelers undergoing entry screening in the United States.
T68 3162-3520 Sentence denotes In response to the escalating risks associated with travel from mainland China, on January 31, 2020, the Presidential Proclamation further refined the border health strategy to temporarily suspend entry, undergo additional screening, or possible quarantine for individuals that have visited China (excluding Hong Kong, Macau, and Taiwan) in the past 14 days.
T69 3521-3649 Sentence denotes These enhanced entry screening efforts are taking place at 11 airports at which all air travelers from China are being directed.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T5 2311-2316 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T6 2318-2323 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T7 2328-2348 Phenotype denotes difficulty breathing http://purl.obolibrary.org/obo/HP_0002098

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
107 41-50 Species denotes 2019-nCoV Tax:2697049
108 218-227 Species denotes 2019-nCoV Tax:2697049
109 1151-1160 Species denotes 2019-nCoV Tax:2697049
117 1855-1858 Gene denotes LAX Gene:54900
118 2715-2722 Species denotes persons Tax:9606
119 2881-2888 Species denotes persons Tax:9606
120 2909-2918 Species denotes 2019-nCoV Tax:2697049
121 1524-1543 Disease denotes infectious diseases MESH:D003141
122 2311-2316 Disease denotes fever MESH:D005334
123 2318-2323 Disease denotes cough MESH:D003371