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PMC:7004396 / 154-2878 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T91 84-95 UBERON:0001004 denotes respiratory
T90 153-159 NCBITaxon:33208 denotes animal
T89 291-302 NCBITaxon:11118 denotes coronavirus
T88 304-313 SP_7 denotes 2019-nCoV
T87 474-480 GO:0016265 denotes deaths
T86 659-665 NCBITaxon:9606 denotes person
T85 669-675 NCBITaxon:9606 denotes person
T84 697-702 GO:0016265 denotes death
T83 861-870 SP_7 denotes 2019-nCoV
T82 994-999 SP_6;NCBITaxon:9606 denotes Human
T81 1079-1088 SP_7 denotes 2019-nCoV
T80 1227-1234 NCBITaxon:1 denotes Persons
T79 1278-1289 NCBITaxon:11118 denotes Coronavirus
T78 1337-1344 NCBITaxon:1 denotes persons
T77 1602-1611 SP_7 denotes 2019-nCoV
T76 1902-1911 SP_7 denotes 2019-nCoV
T75 2052-2057 NCBITaxon:10239 denotes virus
T74 2328-2337 SP_7 denotes 2019-nCoV
T73 2515-2525 GO:0065007 denotes monitoring
T72 2560-2567 GO:0007612 denotes learned
T71 2585-2590 NCBITaxon:10239 denotes virus

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 1010-1013 Disease denotes HHS http://purl.obolibrary.org/obo/MONDO_0008897|http://purl.obolibrary.org/obo/MONDO_0011549
T3 2328-2347 Disease denotes 2019-nCoV infection http://purl.obolibrary.org/obo/MONDO_0100096
T4 2338-2347 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 56-57 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 153-159 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T3 283-284 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 385-386 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 726-728 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T6 807-819 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T7 892-893 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 994-999 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T9 1034-1035 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 1153-1154 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 1244-1245 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 1448-1451 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T13 2052-2057 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T14 2585-2590 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T15 2610-2613 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC
T16 2681-2684 http://purl.obolibrary.org/obo/CL_0000990 denotes CDC

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 1010-1013 Chemical denotes HHS http://purl.obolibrary.org/obo/CHEBI_88937

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T2 0-222 Sentence denotes On December 31, 2019, Chinese health officials reported a cluster of cases of acute respiratory illness in persons associated with the Hunan seafood and animal market in the city of Wuhan, Hubei Province, in central China.
T3 223-360 Sentence denotes On January 7, 2020, Chinese health officials confirmed that a novel coronavirus (2019-nCoV) was associated with this initial cluster (1).
T4 361-553 Sentence denotes As of February 4, 2020, a total of 20,471 confirmed cases, including 2,788 (13.6%) with severe illness,* and 425 deaths (2.1%) had been reported by the National Health Commission of China (2).
T5 554-707 Sentence denotes Cases have also been reported in 26 locations outside of mainland China, including documentation of some person-to-person transmission and one death (2).
T6 708-774 Sentence denotes As of February 4, 11 cases had been reported in the United States.
T7 775-968 Sentence denotes On January 30, the World Health Organization (WHO) Director-General declared that the 2019-nCoV outbreak constitutes a Public Health Emergency of International Concern.† On January 31, the U.S.
T8 969-1447 Sentence denotes Department of Health and Human Services (HHS) Secretary declared a U.S. public health emergency to respond to 2019-nCoV.§ Also on January 31, the president of the United States signed a “Proclamation on Suspension of Entry as Immigrants and Nonimmigrants of Persons who Pose a Risk of Transmitting 2019 Novel Coronavirus,” which limits entry into the United States of persons who traveled to mainland China to U.S. citizens and lawful permanent residents and their families (3).
T9 1448-1639 Sentence denotes CDC, multiple other federal agencies, state and local health departments, and other partners are implementing aggressive measures to slow transmission of 2019-nCoV in the United States (4,5).
T10 1640-1834 Sentence denotes These measures require the identification of cases and their contacts in the United States and the appropriate assessment and care of travelers arriving from mainland China to the United States.
T11 1835-1939 Sentence denotes These measures are being implemented in anticipation of additional 2019-nCoV cases in the United States.
T12 1940-2484 Sentence denotes Although these measures might not prevent the eventual establishment of ongoing, widespread transmission of the virus in the United States, they are being implemented to 1) slow the spread of illness; 2) provide time to better prepare health care systems and the general public to be ready if widespread transmission with substantial associated illness occurs; and 3) better characterize 2019-nCoV infection to guide public health recommendations and the development of medical countermeasures including diagnostics, therapeutics, and vaccines.
T13 2485-2548 Sentence denotes Public health authorities are monitoring the situation closely.
T14 2549-2724 Sentence denotes As more is learned about this novel virus and this outbreak, CDC will rapidly incorporate new knowledge into guidance for action by CDC and state and local health departments.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 84-103 Phenotype denotes respiratory illness http://purl.obolibrary.org/obo/HP_0002086

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
17 107-114 Species denotes persons Tax:9606
18 285-302 Species denotes novel coronavirus Tax:2697049
19 304-313 Species denotes 2019-nCoV Tax:2697049
20 861-870 Species denotes 2019-nCoV Tax:2697049
21 994-999 Species denotes Human Tax:9606
22 1079-1088 Species denotes 2019-nCoV Tax:2697049
23 1227-1234 Species denotes Persons Tax:9606
24 1267-1289 Species denotes 2019 Novel Coronavirus Tax:2697049
25 1337-1344 Species denotes persons Tax:9606
26 1602-1611 Species denotes 2019-nCoV Tax:2697049
27 1902-1911 Species denotes 2019-nCoV Tax:2697049
28 84-103 Disease denotes respiratory illness MESH:D012140
29 474-480 Disease denotes deaths MESH:D003643
30 697-702 Disease denotes death MESH:D003643
31 2328-2347 Disease denotes 2019-nCoV infection MESH:C000657245