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PMC:7003341 / 64711-65360 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T280 332-337 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T281 568-573 Body_part denotes lungs http://purl.org/sig/ont/fma/fma68877

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T186 332-337 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T187 608-624 Body_part denotes pleural effusion http://purl.obolibrary.org/obo/UBERON_0000175

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T172 262-277 Disease denotes pulmonary edema http://purl.obolibrary.org/obo/MONDO_0006932
T173 278-297 Disease denotes Respiratory failure http://purl.obolibrary.org/obo/MONDO_0021113
T174 332-345 Disease denotes heart failure http://purl.obolibrary.org/obo/MONDO_0005252
T175 467-482 Disease denotes pulmonary edema http://purl.obolibrary.org/obo/MONDO_0006932

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T443 332-337 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T444 332-337 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T445 332-337 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T446 332-337 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T447 365-374 http://purl.obolibrary.org/obo/BFO_0000030 denotes Objective
T448 568-573 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lungs
T449 608-624 http://purl.obolibrary.org/obo/UBERON_0000175 denotes pleural effusion

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T78 157-161 Chemical denotes PEEP http://purl.obolibrary.org/obo/CHEBI_53359|http://purl.obolibrary.org/obo/CHEBI_60683
T54252 203-207 Chemical denotes PEEP http://purl.obolibrary.org/obo/CHEBI_53359|http://purl.obolibrary.org/obo/CHEBI_60683
T99366 238-242 Chemical denotes PEEP http://purl.obolibrary.org/obo/CHEBI_53359|http://purl.obolibrary.org/obo/CHEBI_60683

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T170 123-132 Phenotype denotes Hypoxemia http://purl.obolibrary.org/obo/HP_0012418
T171 262-277 Phenotype denotes pulmonary edema http://purl.obolibrary.org/obo/HP_0100598
T172 278-297 Phenotype denotes Respiratory failure http://purl.obolibrary.org/obo/HP_0002878
T173 332-345 Phenotype denotes heart failure http://purl.obolibrary.org/obo/HP_0001635
T174 467-482 Phenotype denotes pulmonary edema http://purl.obolibrary.org/obo/HP_0100598
T175 608-624 Phenotype denotes pleural effusion http://purl.obolibrary.org/obo/HP_0002202
T176 626-637 Phenotype denotes atelectasis http://purl.obolibrary.org/obo/HP_0100750

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T509 0-25 Sentence denotes Item Mild Moderate Severe
T510 26-122 Sentence denotes Onset time Respiratory symptoms developed/aggravated within 1 week after clinically known damage
T511 123-251 Sentence denotes Hypoxemia PaO2/FiO2 201–300 mmHg, PEEP or CPAP ≥5 cmH2O PaO2/FiO2 101–200 mmHg, PEEP≥5 cmH2O PaO2/FiO2 ≤ 100 mmHg, PEEP≥10 cmH2O
T512 252-364 Sentence denotes Causes of pulmonary edema Respiratory failure cannot be completely explained by heart failure or fluid overload.
T513 365-514 Sentence denotes Objective assessment (such as echocardiography) is needed to eliminate the possibility of hydrostatic pulmonary edema if other risk factor is absent.
T514 515-649 Sentence denotes Abnormality in imaging Decreased transparence of two lungs cannot be completely explained by pleural effusion, atelectasis or nodules.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1138 37-48 Species denotes Respiratory Tax:12814
1139 116-132 Disease denotes damage Hypoxemia MESH:D000860
1140 262-297 Disease denotes pulmonary edema Respiratory failure MESH:D012131
1141 332-345 Disease denotes heart failure MESH:D006333
1142 455-482 Disease denotes hydrostatic pulmonary edema MESH:D011654
1143 608-624 Disease denotes pleural effusion MESH:D010996