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    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"267","span":{"begin":110,"end":119},"obj":"Species"},{"id":"268","span":{"begin":369,"end":374},"obj":"Species"},{"id":"269","span":{"begin":378,"end":383},"obj":"Species"},{"id":"270","span":{"begin":606,"end":611},"obj":"Species"},{"id":"271","span":{"begin":615,"end":620},"obj":"Species"},{"id":"272","span":{"begin":739,"end":744},"obj":"Species"},{"id":"273","span":{"begin":748,"end":753},"obj":"Species"},{"id":"274","span":{"begin":73,"end":83},"obj":"Disease"},{"id":"275","span":{"begin":162,"end":171},"obj":"Disease"}],"attributes":[{"id":"A267","pred":"tao:has_database_id","subj":"267","obj":"Tax:2697049"},{"id":"A268","pred":"tao:has_database_id","subj":"268","obj":"Tax:9606"},{"id":"A269","pred":"tao:has_database_id","subj":"269","obj":"Tax:9606"},{"id":"A270","pred":"tao:has_database_id","subj":"270","obj":"Tax:9606"},{"id":"A271","pred":"tao:has_database_id","subj":"271","obj":"Tax:9606"},{"id":"A272","pred":"tao:has_database_id","subj":"272","obj":"Tax:9606"},{"id":"A273","pred":"tao:has_database_id","subj":"273","obj":"Tax:9606"},{"id":"A274","pred":"tao:has_database_id","subj":"274","obj":"MESH:D007239"},{"id":"A275","pred":"tao:has_database_id","subj":"275","obj":"MESH:D007239"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"In this article, we describe a preliminary assessment of the outbreak of infections with the newly identified 2019-nCoV. This assessment is based on the cases of infection reported over time by health authorities in Wuhan and then at the national level, as well as the media in China and other countries. One of the most urgent priorities is to determine the degree of human-to-human transmissibility of the novel pathogen, and accordingly, this is where information is most urgently needed. We outline two possible scenarios in the Table and find that the early evidence was most consistent with limited human-to-human transmissibility, however more recent data seem to be increasingly more compatible with scenario 2 in which sustained human-to-human transmission has been occurring. Determining the exposure profile among the recently confirmed cases would directly contribute to this assessment. Additional information on approaches to case identification and laboratory testing protocols in Wuhan and in other cities in China would also be informative. A separate priority is to identify the animal reservoir of this novel pathogen and any intermediary hosts, including potential supply chains of wild or game meat."}

    LitCovid-PMC-OGER-BB

    {"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T203","span":{"begin":110,"end":119},"obj":"SP_7"},{"id":"T202","span":{"begin":369,"end":374},"obj":"SP_6;NCBITaxon:9606"},{"id":"T201","span":{"begin":378,"end":383},"obj":"SP_6;NCBITaxon:9606"},{"id":"T200","span":{"begin":606,"end":611},"obj":"SP_6;NCBITaxon:9606"},{"id":"T199","span":{"begin":615,"end":620},"obj":"SP_6;NCBITaxon:9606"},{"id":"T198","span":{"begin":739,"end":744},"obj":"SP_6;NCBITaxon:9606"},{"id":"T197","span":{"begin":748,"end":753},"obj":"SP_6;NCBITaxon:9606"},{"id":"T196","span":{"begin":1098,"end":1104},"obj":"NCBITaxon:33208"}],"text":"In this article, we describe a preliminary assessment of the outbreak of infections with the newly identified 2019-nCoV. This assessment is based on the cases of infection reported over time by health authorities in Wuhan and then at the national level, as well as the media in China and other countries. One of the most urgent priorities is to determine the degree of human-to-human transmissibility of the novel pathogen, and accordingly, this is where information is most urgently needed. We outline two possible scenarios in the Table and find that the early evidence was most consistent with limited human-to-human transmissibility, however more recent data seem to be increasingly more compatible with scenario 2 in which sustained human-to-human transmission has been occurring. Determining the exposure profile among the recently confirmed cases would directly contribute to this assessment. Additional information on approaches to case identification and laboratory testing protocols in Wuhan and in other cities in China would also be informative. A separate priority is to identify the animal reservoir of this novel pathogen and any intermediary hosts, including potential supply chains of wild or game meat."}

    LitCovid-PD-MONDO

    {"project":"LitCovid-PD-MONDO","denotations":[{"id":"T54","span":{"begin":73,"end":83},"obj":"Disease"},{"id":"T55","span":{"begin":162,"end":171},"obj":"Disease"}],"attributes":[{"id":"A54","pred":"mondo_id","subj":"T54","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A55","pred":"mondo_id","subj":"T55","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"}],"text":"In this article, we describe a preliminary assessment of the outbreak of infections with the newly identified 2019-nCoV. This assessment is based on the cases of infection reported over time by health authorities in Wuhan and then at the national level, as well as the media in China and other countries. One of the most urgent priorities is to determine the degree of human-to-human transmissibility of the novel pathogen, and accordingly, this is where information is most urgently needed. We outline two possible scenarios in the Table and find that the early evidence was most consistent with limited human-to-human transmissibility, however more recent data seem to be increasingly more compatible with scenario 2 in which sustained human-to-human transmission has been occurring. Determining the exposure profile among the recently confirmed cases would directly contribute to this assessment. Additional information on approaches to case identification and laboratory testing protocols in Wuhan and in other cities in China would also be informative. A separate priority is to identify the animal reservoir of this novel pathogen and any intermediary hosts, including potential supply chains of wild or game meat."}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T118","span":{"begin":29,"end":30},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T119","span":{"begin":369,"end":374},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T120","span":{"begin":378,"end":383},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T121","span":{"begin":606,"end":611},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T122","span":{"begin":615,"end":620},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T123","span":{"begin":739,"end":744},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T124","span":{"begin":748,"end":753},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T125","span":{"begin":767,"end":770},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T126","span":{"begin":976,"end":983},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T127","span":{"begin":1059,"end":1060},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T128","span":{"begin":1098,"end":1104},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"}],"text":"In this article, we describe a preliminary assessment of the outbreak of infections with the newly identified 2019-nCoV. This assessment is based on the cases of infection reported over time by health authorities in Wuhan and then at the national level, as well as the media in China and other countries. One of the most urgent priorities is to determine the degree of human-to-human transmissibility of the novel pathogen, and accordingly, this is where information is most urgently needed. We outline two possible scenarios in the Table and find that the early evidence was most consistent with limited human-to-human transmissibility, however more recent data seem to be increasingly more compatible with scenario 2 in which sustained human-to-human transmission has been occurring. Determining the exposure profile among the recently confirmed cases would directly contribute to this assessment. Additional information on approaches to case identification and laboratory testing protocols in Wuhan and in other cities in China would also be informative. A separate priority is to identify the animal reservoir of this novel pathogen and any intermediary hosts, including potential supply chains of wild or game meat."}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T99","span":{"begin":0,"end":120},"obj":"Sentence"},{"id":"T100","span":{"begin":121,"end":304},"obj":"Sentence"},{"id":"T101","span":{"begin":305,"end":491},"obj":"Sentence"},{"id":"T102","span":{"begin":492,"end":786},"obj":"Sentence"},{"id":"T103","span":{"begin":787,"end":900},"obj":"Sentence"},{"id":"T104","span":{"begin":901,"end":1058},"obj":"Sentence"},{"id":"T105","span":{"begin":1059,"end":1221},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In this article, we describe a preliminary assessment of the outbreak of infections with the newly identified 2019-nCoV. This assessment is based on the cases of infection reported over time by health authorities in Wuhan and then at the national level, as well as the media in China and other countries. One of the most urgent priorities is to determine the degree of human-to-human transmissibility of the novel pathogen, and accordingly, this is where information is most urgently needed. We outline two possible scenarios in the Table and find that the early evidence was most consistent with limited human-to-human transmissibility, however more recent data seem to be increasingly more compatible with scenario 2 in which sustained human-to-human transmission has been occurring. Determining the exposure profile among the recently confirmed cases would directly contribute to this assessment. Additional information on approaches to case identification and laboratory testing protocols in Wuhan and in other cities in China would also be informative. A separate priority is to identify the animal reservoir of this novel pathogen and any intermediary hosts, including potential supply chains of wild or game meat."}