> top > docs > PMC:6988272 > spans > 14206-17174 > annotations

PMC:6988272 / 14206-17174 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
267 121-130 Species denotes 2019-nCoV Tax:2697049
268 380-385 Species denotes human Tax:9606
269 389-394 Species denotes human Tax:9606
270 617-622 Species denotes human Tax:9606
271 626-631 Species denotes human Tax:9606
272 750-755 Species denotes human Tax:9606
273 759-764 Species denotes human Tax:9606
274 84-94 Disease denotes infections MESH:D007239
275 173-182 Disease denotes infection MESH:D007239
286 1400-1408 Species denotes SARS-CoV Tax:694009
287 1334-1339 Disease denotes death MESH:D003643
288 1413-1432 Disease denotes MERS-CoV infections MESH:D018352
289 1653-1658 Disease denotes death MESH:D003643
290 1663-1673 Disease denotes infections MESH:D007239
291 1705-1709 Disease denotes SARS MESH:D045169
292 1757-1762 Disease denotes death MESH:D003643
293 2040-2044 Disease denotes died MESH:D003643
294 2275-2285 Disease denotes infections MESH:D007239
295 2308-2317 Disease denotes infection MESH:D007239

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T203 121-130 SP_7 denotes 2019-nCoV
T202 380-385 SP_6;NCBITaxon:9606 denotes human
T201 389-394 SP_6;NCBITaxon:9606 denotes human
T200 617-622 SP_6;NCBITaxon:9606 denotes human
T199 626-631 SP_6;NCBITaxon:9606 denotes human
T198 750-755 SP_6;NCBITaxon:9606 denotes human
T197 759-764 SP_6;NCBITaxon:9606 denotes human
T196 1109-1115 NCBITaxon:33208 denotes animal
T195 1334-1339 GO:0016265 denotes death
T194 1400-1408 SP_10 denotes SARS-CoV
T193 1413-1421 SP_9 denotes MERS-CoV
T192 1653-1658 GO:0016265 denotes death
T191 1705-1709 SP_10 denotes SARS
T190 1757-1762 GO:0016265 denotes death
T189 2040-2044 GO:0016265 denotes died
T188 2475-2481 SO:0000417 denotes domain

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T54 84-94 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T55 173-182 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T56 1400-1408 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T57 1422-1432 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T58 1663-1673 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T59 1705-1709 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T60 2275-2288 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T61 2308-2317 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T118 40-41 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T119 380-385 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T120 389-394 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T121 617-622 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T122 626-631 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T123 750-755 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T124 759-764 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T125 778-781 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T126 987-994 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T127 1070-1071 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T128 1109-1115 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animal
T129 1977-1979 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T130 2230-2231 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T131 2374-2375 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T132 2512-2515 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T133 2802-2807 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T134 2811-2818 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T135 2891-2892 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T98 0-10 Sentence denotes Discussion
T99 11-131 Sentence denotes In this article, we describe a preliminary assessment of the outbreak of infections with the newly identified 2019-nCoV.
T100 132-315 Sentence denotes This assessment is based on the cases of infection reported over time by health authorities in Wuhan and then at the national level, as well as the media in China and other countries.
T101 316-502 Sentence denotes One of the most urgent priorities is to determine the degree of human-to-human transmissibility of the novel pathogen, and accordingly, this is where information is most urgently needed.
T102 503-797 Sentence denotes We outline two possible scenarios in the Table and find that the early evidence was most consistent with limited human-to-human transmissibility, however more recent data seem to be increasingly more compatible with scenario 2 in which sustained human-to-human transmission has been occurring.
T103 798-911 Sentence denotes Determining the exposure profile among the recently confirmed cases would directly contribute to this assessment.
T104 912-1069 Sentence denotes Additional information on approaches to case identification and laboratory testing protocols in Wuhan and in other cities in China would also be informative.
T105 1070-1232 Sentence denotes A separate priority is to identify the animal reservoir of this novel pathogen and any intermediary hosts, including potential supply chains of wild or game meat.
T106 1233-1308 Sentence denotes It is challenging to judge severity from the information available to date.
T107 1309-1390 Sentence denotes We estimated the risk of death among hospitalised cases of around 14% (Figure 2).
T108 1391-1549 Sentence denotes For both SARS-CoV and MERS-CoV infections, the risk of severe disease increases substantially with age and with the presence of underlying conditions [23-25].
T109 1550-1700 Sentence denotes One other caveat with estimating severity is that there can be long delays between hospitalisation and death for infections that are ultimately fatal.
T110 1701-1796 Sentence denotes For SARS in Hong Kong, the average time from illness to death for fatal cases was 24 days [26].
T111 1797-1981 Sentence denotes This means that early estimates of the case fatality risk that ignore the potential outcomes of cases still in hospital are typically underestimates of the final severity profile [27].
T112 1982-2104 Sentence denotes We accounted for that by only including cases that either died or recovered in our estimate of the hospital fatality risk.
T113 2105-2363 Sentence denotes Given that the cases reported outside Wuhan have mostly not been severe, it would be reasonable to infer that there might be a large number of undetected relatively mild infections in Wuhan and that the infection fatality risk is below 1% or even below 0.1%.
T114 2364-2414 Sentence denotes There are a number of limitations to our analyses.
T115 2415-2490 Sentence denotes Most importantly, they are only based on data in the public domain to date.
T116 2491-2599 Sentence denotes Detailed information has not yet been released by authoritative sources on the most recently reported cases.
T117 2600-2968 Sentence denotes In our analysis in the Table, support for scenario 2 might increase if contact tracing or medical surveillance was incomplete, if there was incomplete ascertainment of clusters or if there was an early focus in testing cases linked to the Southern China Seafood Wholesale Market that led to a selection bias in the prevalence of market exposures among the early cases.

MyTest

Id Subject Object Predicate Lexical cue
31992388-16864761-29332093 1542-1544 16864761 denotes 23
31992388-20205928-29332093 1542-1544 20205928 denotes 23
31992388-29680581-29332093 1542-1544 29680581 denotes 23
31992388-15520422-29332094 1792-1794 15520422 denotes 26
31992388-16981181-29332095 1977-1979 16981181 denotes 27

2_test

Id Subject Object Predicate Lexical cue
31992388-16864761-29332093 1542-1544 16864761 denotes 23
31992388-20205928-29332093 1542-1544 20205928 denotes 23
31992388-29680581-29332093 1542-1544 29680581 denotes 23
31992388-15520422-29332094 1792-1794 15520422 denotes 26
31992388-16981181-29332095 1977-1979 16981181 denotes 27