PMC:6988269 / 15117-15917 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T77","span":{"begin":344,"end":348},"obj":"Body_part"}],"attributes":[{"id":"A77","pred":"fma_id","subj":"T77","obj":"http://purl.org/sig/ont/fma/fma74402"}],"text":"Detection range for SARS-related coronaviruses from bats\nAt present, the potential exposure to a common environmental source in early reported cases implicates the possibility of independent zoonotic infections with increased sequence variability [5]. To show that the assays can detect other bat-associated SARS-related viruses, we used the E gene assay to test six bat-derived faecal samples available from Drexler et al. [13] und Muth et al. [14]. These virus-positive samples stemmed from European rhinolophid bats. Detection of these phylogenetic outliers within the SARS-related CoV clade suggests that all Asian viruses are likely to be detected. This would, theoretically, ensure broad sensitivity even in case of multiple independent acquisitions of variant viruses from an animal reservoir."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T51","span":{"begin":20,"end":24},"obj":"Disease"},{"id":"T52","span":{"begin":191,"end":210},"obj":"Disease"},{"id":"T53","span":{"begin":308,"end":312},"obj":"Disease"},{"id":"T54","span":{"begin":572,"end":576},"obj":"Disease"}],"attributes":[{"id":"A51","pred":"mondo_id","subj":"T51","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A52","pred":"mondo_id","subj":"T52","obj":"http://purl.obolibrary.org/obo/MONDO_0025481"},{"id":"A53","pred":"mondo_id","subj":"T53","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A54","pred":"mondo_id","subj":"T54","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Detection range for SARS-related coronaviruses from bats\nAt present, the potential exposure to a common environmental source in early reported cases implicates the possibility of independent zoonotic infections with increased sequence variability [5]. To show that the assays can detect other bat-associated SARS-related viruses, we used the E gene assay to test six bat-derived faecal samples available from Drexler et al. [13] und Muth et al. [14]. These virus-positive samples stemmed from European rhinolophid bats. Detection of these phylogenetic outliers within the SARS-related CoV clade suggests that all Asian viruses are likely to be detected. This would, theoretically, ensure broad sensitivity even in case of multiple independent acquisitions of variant viruses from an animal reservoir."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T130","span":{"begin":52,"end":56},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T131","span":{"begin":95,"end":96},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T132","span":{"begin":293,"end":296},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T133","span":{"begin":321,"end":328},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T134","span":{"begin":344,"end":348},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T135","span":{"begin":358,"end":362},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T136","span":{"begin":367,"end":370},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T137","span":{"begin":457,"end":462},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T138","span":{"begin":514,"end":518},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9397"},{"id":"T139","span":{"begin":619,"end":626},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T140","span":{"begin":767,"end":774},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_10239"},{"id":"T141","span":{"begin":783,"end":789},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_33208"}],"text":"Detection range for SARS-related coronaviruses from bats\nAt present, the potential exposure to a common environmental source in early reported cases implicates the possibility of independent zoonotic infections with increased sequence variability [5]. To show that the assays can detect other bat-associated SARS-related viruses, we used the E gene assay to test six bat-derived faecal samples available from Drexler et al. [13] und Muth et al. [14]. These virus-positive samples stemmed from European rhinolophid bats. Detection of these phylogenetic outliers within the SARS-related CoV clade suggests that all Asian viruses are likely to be detected. This would, theoretically, ensure broad sensitivity even in case of multiple independent acquisitions of variant viruses from an animal reservoir."}

{"project":"LitCovid-sentences","denotations":[{"id":"T128","span":{"begin":0,"end":56},"obj":"Sentence"},{"id":"T129","span":{"begin":57,"end":251},"obj":"Sentence"},{"id":"T130","span":{"begin":252,"end":450},"obj":"Sentence"},{"id":"T131","span":{"begin":451,"end":519},"obj":"Sentence"},{"id":"T132","span":{"begin":520,"end":653},"obj":"Sentence"},{"id":"T133","span":{"begin":654,"end":800},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Detection range for SARS-related coronaviruses from bats\nAt present, the potential exposure to a common environmental source in early reported cases implicates the possibility of independent zoonotic infections with increased sequence variability [5]. To show that the assays can detect other bat-associated SARS-related viruses, we used the E gene assay to test six bat-derived faecal samples available from Drexler et al. [13] und Muth et al. [14]. These virus-positive samples stemmed from European rhinolophid bats. Detection of these phylogenetic outliers within the SARS-related CoV clade suggests that all Asian viruses are likely to be detected. This would, theoretically, ensure broad sensitivity even in case of multiple independent acquisitions of variant viruses from an animal reservoir."}

{"project":"2_test","denotations":[{"id":"31992387-20686038-29325741","span":{"begin":425,"end":427},"obj":"20686038"},{"id":"31992387-30310104-29325742","span":{"begin":446,"end":448},"obj":"30310104"}],"text":"Detection range for SARS-related coronaviruses from bats\nAt present, the potential exposure to a common environmental source in early reported cases implicates the possibility of independent zoonotic infections with increased sequence variability [5]. To show that the assays can detect other bat-associated SARS-related viruses, we used the E gene assay to test six bat-derived faecal samples available from Drexler et al. [13] und Muth et al. [14]. These virus-positive samples stemmed from European rhinolophid bats. Detection of these phylogenetic outliers within the SARS-related CoV clade suggests that all Asian viruses are likely to be detected. This would, theoretically, ensure broad sensitivity even in case of multiple independent acquisitions of variant viruses from an animal reservoir."}

{"project":"LitCovid-PubTator","denotations":[{"id":"265","span":{"begin":20,"end":46},"obj":"Species"},{"id":"268","span":{"begin":572,"end":588},"obj":"Species"},{"id":"269","span":{"begin":191,"end":210},"obj":"Disease"}],"attributes":[{"id":"A265","pred":"tao:has_database_id","subj":"265","obj":"Tax:694009"},{"id":"A268","pred":"tao:has_database_id","subj":"268","obj":"Tax:694009"},{"id":"A269","pred":"tao:has_database_id","subj":"269","obj":"MESH:D015047"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Detection range for SARS-related coronaviruses from bats\nAt present, the potential exposure to a common environmental source in early reported cases implicates the possibility of independent zoonotic infections with increased sequence variability [5]. To show that the assays can detect other bat-associated SARS-related viruses, we used the E gene assay to test six bat-derived faecal samples available from Drexler et al. [13] und Muth et al. [14]. These virus-positive samples stemmed from European rhinolophid bats. Detection of these phylogenetic outliers within the SARS-related CoV clade suggests that all Asian viruses are likely to be detected. This would, theoretically, ensure broad sensitivity even in case of multiple independent acquisitions of variant viruses from an animal reservoir."}

{"project":"MyTest","denotations":[{"id":"31992387-20686038-29325741","span":{"begin":425,"end":427},"obj":"20686038"},{"id":"31992387-30310104-29325742","span":{"begin":446,"end":448},"obj":"30310104"}],"namespaces":[{"prefix":"_base","uri":"https://www.uniprot.org/uniprot/testbase"},{"prefix":"UniProtKB","uri":"https://www.uniprot.org/uniprot/"},{"prefix":"uniprot","uri":"https://www.uniprot.org/uniprotkb/"}],"text":"Detection range for SARS-related coronaviruses from bats\nAt present, the potential exposure to a common environmental source in early reported cases implicates the possibility of independent zoonotic infections with increased sequence variability [5]. To show that the assays can detect other bat-associated SARS-related viruses, we used the E gene assay to test six bat-derived faecal samples available from Drexler et al. [13] und Muth et al. [14]. These virus-positive samples stemmed from European rhinolophid bats. Detection of these phylogenetic outliers within the SARS-related CoV clade suggests that all Asian viruses are likely to be detected. This would, theoretically, ensure broad sensitivity even in case of multiple independent acquisitions of variant viruses from an animal reservoir."}