PMC:6599329 / 39639-41968 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/6599329","sourcedb":"PMC","sourceid":"6599329","source_url":"https://www.ncbi.nlm.nih.gov/pmc/6599329","text":"Abbreviations\nDAVID Database for Annotation, Visualization and Integrated Discovery\nEASE Expression Analysis Systematic Explorer\nEPS Extra polymeric substance\nFPR False positive rate\nfsr Fecal Streptococci regulator\nGO Gene Ontology\nKEGG Kyoto Encyclopedia of Gene and Genomes\nLC-MS/MS Liquid Chromatography - Tandem Mass Spectrometry\nLuxS S-ribosylhomocysteinase\nPBS Phosphate buffered saline\nPLGS ProteinLynx Global SERVER™\nPublisher’s Note\nSpringer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.\n\nThe authors would like to thank Prof. M. Radhakrishna Pillai, Director, Rajiv Gandhi Centre for Biotechnology, for providing the necessary facilities. We also acknowledge Arun Surendran and Mahesh Chandran at the Mass Spectrometry and Proteomics Core Facility for technical assistance in LC-MS/MS analysis and also members of Confocal Imaging Core Facility for assistance in imaging. KS acknowledges Kerala State Council for Science, Technology \u0026 Environment, Government of Kerala for the fellowship provided.\n\nAuthors’ contributions\nKS and ST conceived and designed the experiments. KS and LN performed the experiments, KS, JJ, SG and ST analyzed the results. KS and MPR drafted the manuscript. ST critically reviewed the manuscript. All authors read and approved the final manuscript.\n\nFunding\nThis work is funded by Department of Biotechnology, Ministry of Science and Technology, Govt. of India (Grant no. BT/PR15261/MED/29/994/2015). The funding body had no role in the design of the study, analysis and interpretation of data and in writing the manuscript.\n\nAvailability of data and materials\nThe mass spectrometry proteomics data have been deposited to the ProteomeXchange Consortium via the PRIDE partner repository with the dataset identifier PXD010770.\n\nEthics approval and consent to participate\nThe study was approved by the Institutional Human Ethics Committee (Reference number RGCB-IEC No. IHEC/01/2013/11) of Rajiv Gandhi Centre for Biotechnology. The participants were enrolled in this study after signing the informed consent protocol form. Animal Ethics clearance is not applicable, as this study does not involve any animals.\n\nConsent for publication\nNot applicable.\n\nCompeting interests\nThe authors declare that they have no competing interests.","divisions":[{"label":"title","span":{"begin":0,"end":13}},{"label":"p","span":{"begin":20,"end":83}},{"label":"p","span":{"begin":89,"end":128}},{"label":"p","span":{"begin":133,"end":158}},{"label":"p","span":{"begin":163,"end":182}},{"label":"p","span":{"begin":187,"end":215}},{"label":"p","span":{"begin":219,"end":232}},{"label":"p","span":{"begin":238,"end":276}},{"label":"p","span":{"begin":286,"end":334}},{"label":"p","span":{"begin":340,"end":363}},{"label":"p","span":{"begin":368,"end":393}},{"label":"p","span":{"begin":399,"end":425}},{"label":"footnote","span":{"begin":426,"end":561}},{"label":"p","span":{"begin":426,"end":443}},{"label":"p","span":{"begin":443,"end":561}},{"label":"ack","span":{"begin":563,"end":1072}},{"label":"p","span":{"begin":563,"end":1072}},{"label":"notes","span":{"begin":1074,"end":1349}},{"label":"title","span":{"begin":1074,"end":1096}},{"label":"p","span":{"begin":1097,"end":1349}},{"label":"notes","span":{"begin":1351,"end":1625}},{"label":"title","span":{"begin":1351,"end":1358}},{"label":"p","span":{"begin":1359,"end":1625}},{"label":"notes","span":{"begin":1627,"end":1825}},{"label":"title","span":{"begin":1627,"end":1661}},{"label":"p","span":{"begin":1662,"end":1825}},{"label":"notes","span":{"begin":1827,"end":2208}},{"label":"title","span":{"begin":1827,"end":1869}},{"label":"p","span":{"begin":1870,"end":2208}},{"label":"notes","span":{"begin":2210,"end":2249}},{"label":"title","span":{"begin":2210,"end":2233}},{"label":"p","span":{"begin":2234,"end":2249}},{"label":"title","span":{"begin":2251,"end":2270}}],"tracks":[]}