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PMC:549712 / 42500-43846 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T12954 0-2 IN denotes In
T12955 22-29 VBP denotes suggest
T12956 3-11 NN denotes addition
T12957 11-13 , denotes ,
T12958 13-16 PRP$ denotes our
T12959 17-21 NNS denotes data
T12960 30-34 IN denotes that
T12961 106-108 VBZ denotes is
T12962 35-41 IN denotes during
T12963 42-55 NN denotes embryogenesis
T12964 55-57 , denotes ,
T12965 57-67 NN denotes macrophage
T12966 68-76 VBN denotes mediated
T12967 67-68 HYPH denotes -
T12968 77-86 NN denotes clearance
T12969 87-89 IN denotes of
T12970 90-99 JJ denotes apoptotic
T12971 100-105 NNS denotes cells
T12972 109-112 RB denotes not
T12973 113-116 DT denotes the
T12974 117-121 JJ denotes only
T12975 122-123 , denotes -
T12976 124-126 CC denotes or
T12977 127-131 RB denotes even
T12978 136-143 JJ denotes primary
T12979 132-135 DT denotes the
T12980 144-145 , denotes -
T12981 146-155 NN denotes mechanism
T12982 156-159 IN denotes for
T12983 160-163 DT denotes the
T12984 164-171 NN denotes removal
T12985 172-174 IN denotes of
T12986 175-184 JJ denotes apoptotic
T12987 185-190 NNS denotes cells
T12988 190-191 . denotes .
T12989 191-463 sentence denotes In many tissues where programmed cell death occurs as a prominent event during embryogenesis, such as remodeling of the genital ridge during gonad morphogenesis and differentiation of the neural tube, we found almost no co-localization of apoptotic cells and macrophages.
T12990 192-194 IN denotes In
T12991 396-401 VBD denotes found
T12992 195-199 JJ denotes many
T12993 200-207 NNS denotes tissues
T12994 208-213 WRB denotes where
T12995 236-242 VBZ denotes occurs
T12996 214-224 VBN denotes programmed
T12997 230-235 NN denotes death
T12998 225-229 NN denotes cell
T12999 243-245 IN denotes as
T13000 246-247 DT denotes a
T13001 258-263 NN denotes event
T13002 248-257 JJ denotes prominent
T13003 264-270 IN denotes during
T13004 271-284 NN denotes embryogenesis
T13005 284-286 , denotes ,
T13006 286-290 JJ denotes such
T13007 291-293 IN denotes as
T13008 294-304 VBG denotes remodeling
T13009 305-307 IN denotes of
T13010 308-311 DT denotes the
T13011 320-325 NN denotes ridge
T13012 312-319 JJ denotes genital
T13013 326-332 IN denotes during
T13014 333-338 NN denotes gonad
T13015 339-352 NN denotes morphogenesis
T13016 353-356 CC denotes and
T13017 357-372 NN denotes differentiation
T13018 373-375 IN denotes of
T13019 376-379 DT denotes the
T13020 387-391 NN denotes tube
T13021 380-386 JJ denotes neural
T13022 391-393 , denotes ,
T13023 393-395 PRP denotes we
T13024 402-408 RB denotes almost
T13025 412-427 NN denotes co-localization
T13026 409-411 DT denotes no
T13027 428-430 IN denotes of
T13028 431-440 JJ denotes apoptotic
T13029 441-446 NNS denotes cells
T13030 447-450 CC denotes and
T13031 451-462 NNS denotes macrophages
T13032 462-463 . denotes .
T13033 463-668 sentence denotes This indicates that in these cases clearance of apoptotic cells is directly mediated by neighboring 'bystander' cells rather than by macrophages that have been recruited into areas where apoptosis occurs.
T13034 464-468 DT denotes This
T13035 469-478 VBZ denotes indicates
T13036 479-483 IN denotes that
T13037 540-548 VBN denotes mediated
T13038 484-486 IN denotes in
T13039 487-492 DT denotes these
T13040 493-498 NNS denotes cases
T13041 499-508 NN denotes clearance
T13042 509-511 IN denotes of
T13043 512-521 JJ denotes apoptotic
T13044 522-527 NNS denotes cells
T13045 528-530 VBZ denotes is
T13046 531-539 RB denotes directly
T13047 549-551 IN denotes by
T13048 552-563 VBG denotes neighboring
T13049 576-581 NNS denotes cells
T13050 564-565 `` denotes '
T13051 565-574 NN denotes bystander
T13052 574-575 '' denotes '
T13053 582-588 RB denotes rather
T13054 589-593 IN denotes than
T13055 594-596 IN denotes by
T13056 597-608 NNS denotes macrophages
T13057 609-613 WDT denotes that
T13058 624-633 VBN denotes recruited
T13059 614-618 VBP denotes have
T13060 619-623 VBN denotes been
T13061 634-638 IN denotes into
T13062 639-644 NNS denotes areas
T13063 645-650 WRB denotes where
T13064 661-667 VBZ denotes occurs
T13065 651-660 NN denotes apoptosis
T13066 667-668 . denotes .
T13067 668-777 sentence denotes Obviously these in vivo clearance mechanisms are not compromised by Ptdsr-deficiency in our knockout mutant.
T13068 669-678 RB denotes Obviously
T13069 722-733 VBN denotes compromised
T13070 679-684 DT denotes these
T13071 703-713 NNS denotes mechanisms
T13072 685-687 FW denotes in
T13073 688-692 FW denotes vivo
T13074 693-702 NN denotes clearance
T13075 714-717 VBP denotes are
T13076 718-721 RB denotes not
T13077 734-736 IN denotes by
T13078 737-742 NN denotes Ptdsr
T13079 743-753 NN denotes deficiency
T13080 742-743 HYPH denotes -
T13081 754-756 IN denotes in
T13082 757-760 PRP$ denotes our
T13083 770-776 NN denotes mutant
T13084 761-769 NN denotes knockout
T13085 776-777 . denotes .
T13086 777-940 sentence denotes This finding is in line with studies in macrophageless Sfpi1-knockout embryos that are deficient for the hematopoietic-lineage-specific transcription factor PU.1.
T13087 778-782 DT denotes This
T13088 783-790 NN denotes finding
T13089 791-793 VBZ denotes is
T13090 794-796 IN denotes in
T13091 797-801 NN denotes line
T13092 802-806 IN denotes with
T13093 807-814 NNS denotes studies
T13094 815-817 IN denotes in
T13095 818-832 JJ denotes macrophageless
T13096 848-855 NNS denotes embryos
T13097 833-838 NN denotes Sfpi1
T13098 839-847 NN denotes knockout
T13099 838-839 HYPH denotes -
T13100 856-860 WDT denotes that
T13101 861-864 VBP denotes are
T13102 865-874 JJ denotes deficient
T13103 875-878 IN denotes for
T13104 879-882 DT denotes the
T13105 928-934 NN denotes factor
T13106 883-896 JJ denotes hematopoietic
T13107 897-904 NN denotes lineage
T13108 896-897 HYPH denotes -
T13109 905-913 JJ denotes specific
T13110 904-905 HYPH denotes -
T13111 914-927 NN denotes transcription
T13112 935-939 NN denotes PU.1
T13113 939-940 . denotes .
T13114 940-1059 sentence denotes Here, the phagocytosis of apoptotic cells during embryogenesis is taken over by 'stand-in' mesenchymal neighbors [47].
T13115 941-945 RB denotes Here
T13116 1007-1012 VBN denotes taken
T13117 945-947 , denotes ,
T13118 947-950 DT denotes the
T13119 951-963 NN denotes phagocytosis
T13120 964-966 IN denotes of
T13121 967-976 JJ denotes apoptotic
T13122 977-982 NNS denotes cells
T13123 983-989 IN denotes during
T13124 990-1003 NN denotes embryogenesis
T13125 1004-1006 VBZ denotes is
T13126 1013-1017 RP denotes over
T13127 1018-1020 IN denotes by
T13128 1021-1022 `` denotes '
T13129 1044-1053 NNS denotes neighbors
T13130 1022-1027 VB denotes stand
T13131 1027-1028 HYPH denotes -
T13132 1028-1030 RP denotes in
T13133 1030-1031 '' denotes '
T13134 1032-1043 JJ denotes mesenchymal
T13135 1054-1055 -LRB- denotes [
T13136 1055-1057 CD denotes 47
T13137 1057-1058 -RRB- denotes ]
T13138 1058-1059 . denotes .
T13139 1059-1346 sentence denotes As recognition of phosphatidylserine is thought to be a universal engulfment mechanism for all cells that are able to phagocytose apoptotic cells, it is very striking that apoptotic cell clearance mediated by non-professional bystander cells is also not compromised by Ptdsr-deficiency.
T13140 1060-1062 IN denotes As
T13141 1100-1107 VBN denotes thought
T13142 1063-1074 NN denotes recognition
T13143 1075-1077 IN denotes of
T13144 1078-1096 NN denotes phosphatidylserine
T13145 1097-1099 VBZ denotes is
T13146 1210-1212 VBZ denotes is
T13147 1108-1110 TO denotes to
T13148 1111-1113 VB denotes be
T13149 1114-1115 DT denotes a
T13150 1137-1146 NN denotes mechanism
T13151 1116-1125 JJ denotes universal
T13152 1126-1136 NN denotes engulfment
T13153 1147-1150 IN denotes for
T13154 1151-1154 DT denotes all
T13155 1155-1160 NNS denotes cells
T13156 1161-1165 WDT denotes that
T13157 1166-1169 VBP denotes are
T13158 1170-1174 JJ denotes able
T13159 1175-1177 TO denotes to
T13160 1178-1189 VB denotes phagocytose
T13161 1190-1199 JJ denotes apoptotic
T13162 1200-1205 NNS denotes cells
T13163 1205-1207 , denotes ,
T13164 1207-1209 PRP denotes it
T13165 1213-1217 RB denotes very
T13166 1218-1226 JJ denotes striking
T13167 1227-1231 IN denotes that
T13168 1314-1325 VBN denotes compromised
T13169 1232-1241 JJ denotes apoptotic
T13170 1247-1256 NN denotes clearance
T13171 1242-1246 NN denotes cell
T13172 1257-1265 VBN denotes mediated
T13173 1266-1268 IN denotes by
T13174 1269-1285 JJ denotes non-professional
T13175 1296-1301 NNS denotes cells
T13176 1286-1295 NN denotes bystander
T13177 1302-1304 VBZ denotes is
T13178 1305-1309 RB denotes also
T13179 1310-1313 RB denotes not
T13180 1326-1328 IN denotes by
T13181 1329-1334 NN denotes Ptdsr
T13182 1335-1345 NN denotes deficiency
T13183 1334-1335 HYPH denotes -
T13184 1345-1346 . denotes .
R7493 T12954 T12955 prep In,suggest
R7494 T12956 T12954 pobj addition,In
R7495 T12957 T12955 punct ", ",suggest
R7496 T12958 T12959 poss our,data
R7497 T12959 T12955 nsubj data,suggest
R7498 T12960 T12961 mark that,is
R7499 T12961 T12955 ccomp is,suggest
R7500 T12962 T12961 prep during,is
R7501 T12963 T12962 pobj embryogenesis,during
R7502 T12964 T12961 punct ", ",is
R7503 T12965 T12966 npadvmod macrophage,mediated
R7504 T12966 T12968 amod mediated,clearance
R7505 T12967 T12966 punct -,mediated
R7506 T12968 T12961 nsubj clearance,is
R7507 T12969 T12968 prep of,clearance
R7508 T12970 T12971 amod apoptotic,cells
R7509 T12971 T12969 pobj cells,of
R7510 T12972 T12961 neg not,is
R7511 T12973 T12974 det the,only
R7512 T12974 T12961 attr only,is
R7513 T12975 T12974 punct -,only
R7514 T12976 T12974 cc or,only
R7515 T12977 T12978 advmod even,primary
R7516 T12978 T12974 conj primary,only
R7517 T12979 T12978 det the,primary
R7518 T12980 T12978 punct -,primary
R7519 T12981 T12978 conj mechanism,primary
R7520 T12982 T12974 prep for,only
R7521 T12983 T12984 det the,removal
R7522 T12984 T12982 pobj removal,for
R7523 T12985 T12984 prep of,removal
R7524 T12986 T12987 amod apoptotic,cells
R7525 T12987 T12985 pobj cells,of
R7526 T12988 T12955 punct .,suggest
R7527 T12990 T12991 prep In,found
R7528 T12992 T12993 amod many,tissues
R7529 T12993 T12990 pobj tissues,In
R7530 T12994 T12995 advmod where,occurs
R7531 T12995 T12993 relcl occurs,tissues
R7532 T12996 T12997 amod programmed,death
R7533 T12997 T12995 nsubj death,occurs
R7534 T12998 T12997 compound cell,death
R7535 T12999 T12995 prep as,occurs
R7536 T13000 T13001 det a,event
R7537 T13001 T12999 pobj event,as
R7538 T13002 T13001 amod prominent,event
R7539 T13003 T13001 prep during,event
R7540 T13004 T13003 pobj embryogenesis,during
R7541 T13005 T13001 punct ", ",event
R7542 T13006 T13007 amod such,as
R7543 T13007 T13001 prep as,event
R7544 T13008 T13007 pobj remodeling,as
R7545 T13009 T13008 prep of,remodeling
R7546 T13010 T13011 det the,ridge
R7547 T13011 T13009 pobj ridge,of
R7548 T13012 T13011 amod genital,ridge
R7549 T13013 T13008 prep during,remodeling
R7550 T13014 T13015 compound gonad,morphogenesis
R7551 T13015 T13013 pobj morphogenesis,during
R7552 T13016 T13015 cc and,morphogenesis
R7553 T13017 T13015 conj differentiation,morphogenesis
R7554 T13018 T13015 prep of,morphogenesis
R7555 T13019 T13020 det the,tube
R7556 T13020 T13018 pobj tube,of
R7557 T13021 T13020 amod neural,tube
R7558 T13022 T12991 punct ", ",found
R7559 T13023 T12991 nsubj we,found
R7560 T13024 T13025 advmod almost,co-localization
R7561 T13025 T12991 dobj co-localization,found
R7562 T13026 T13025 det no,co-localization
R7563 T13027 T13025 prep of,co-localization
R7564 T13028 T13029 amod apoptotic,cells
R7565 T13029 T13027 pobj cells,of
R7566 T13030 T13029 cc and,cells
R7567 T13031 T13029 conj macrophages,cells
R7568 T13032 T12991 punct .,found
R7569 T13034 T13035 nsubj This,indicates
R7570 T13036 T13037 mark that,mediated
R7571 T13037 T13035 ccomp mediated,indicates
R7572 T13038 T13037 prep in,mediated
R7573 T13039 T13040 det these,cases
R7574 T13040 T13038 pobj cases,in
R7575 T13041 T13037 nsubjpass clearance,mediated
R7576 T13042 T13041 prep of,clearance
R7577 T13043 T13044 amod apoptotic,cells
R7578 T13044 T13042 pobj cells,of
R7579 T13045 T13037 auxpass is,mediated
R7580 T13046 T13037 advmod directly,mediated
R7581 T13047 T13037 prep by,mediated
R7582 T13048 T13049 amod neighboring,cells
R7583 T13049 T13047 pobj cells,by
R7584 T13050 T13049 punct ',cells
R7585 T13051 T13049 nmod bystander,cells
R7586 T13052 T13049 punct ',cells
R7587 T13053 T13054 advmod rather,than
R7588 T13054 T13047 cc than,by
R7589 T13055 T13047 conj by,by
R7590 T13056 T13055 pobj macrophages,by
R7591 T13057 T13058 dep that,recruited
R7592 T13058 T13056 relcl recruited,macrophages
R7593 T13059 T13058 aux have,recruited
R7594 T13060 T13058 auxpass been,recruited
R7595 T13061 T13058 prep into,recruited
R7596 T13062 T13061 pobj areas,into
R7597 T13063 T13064 advmod where,occurs
R7598 T13064 T13062 relcl occurs,areas
R7599 T13065 T13064 nsubj apoptosis,occurs
R7600 T13066 T13035 punct .,indicates
R7601 T13068 T13069 advmod Obviously,compromised
R7602 T13070 T13071 det these,mechanisms
R7603 T13071 T13069 nsubjpass mechanisms,compromised
R7604 T13072 T13073 advmod in,vivo
R7605 T13073 T13071 amod vivo,mechanisms
R7606 T13074 T13071 compound clearance,mechanisms
R7607 T13075 T13069 auxpass are,compromised
R7608 T13076 T13069 neg not,compromised
R7609 T13077 T13069 agent by,compromised
R7610 T13078 T13079 compound Ptdsr,deficiency
R7611 T13079 T13077 pobj deficiency,by
R7612 T13080 T13079 punct -,deficiency
R7613 T13081 T13069 prep in,compromised
R7614 T13082 T13083 poss our,mutant
R7615 T13083 T13081 pobj mutant,in
R7616 T13084 T13083 compound knockout,mutant
R7617 T13085 T13069 punct .,compromised
R7618 T13087 T13088 det This,finding
R7619 T13088 T13089 nsubj finding,is
R7620 T13090 T13089 prep in,is
R7621 T13091 T13090 pobj line,in
R7622 T13092 T13091 prep with,line
R7623 T13093 T13092 pobj studies,with
R7624 T13094 T13093 prep in,studies
R7625 T13095 T13096 amod macrophageless,embryos
R7626 T13096 T13094 pobj embryos,in
R7627 T13097 T13098 compound Sfpi1,knockout
R7628 T13098 T13096 compound knockout,embryos
R7629 T13099 T13098 punct -,knockout
R7630 T13100 T13101 dep that,are
R7631 T13101 T13096 relcl are,embryos
R7632 T13102 T13101 acomp deficient,are
R7633 T13103 T13102 prep for,deficient
R7634 T13104 T13105 det the,factor
R7635 T13105 T13103 pobj factor,for
R7636 T13106 T13107 amod hematopoietic,lineage
R7637 T13107 T13109 npadvmod lineage,specific
R7638 T13108 T13107 punct -,lineage
R7639 T13109 T13105 amod specific,factor
R7640 T13110 T13109 punct -,specific
R7641 T13111 T13105 compound transcription,factor
R7642 T13112 T13105 appos PU.1,factor
R7643 T13113 T13089 punct .,is
R7644 T13115 T13116 advmod Here,taken
R7645 T13117 T13116 punct ", ",taken
R7646 T13118 T13119 det the,phagocytosis
R7647 T13119 T13116 nsubjpass phagocytosis,taken
R7648 T13120 T13119 prep of,phagocytosis
R7649 T13121 T13122 amod apoptotic,cells
R7650 T13122 T13120 pobj cells,of
R7651 T13123 T13119 prep during,phagocytosis
R7652 T13124 T13123 pobj embryogenesis,during
R7653 T13125 T13116 auxpass is,taken
R7654 T13126 T13116 prt over,taken
R7655 T13127 T13116 prep by,taken
R7656 T13128 T13129 punct ',neighbors
R7657 T13129 T13127 pobj neighbors,by
R7658 T13130 T13129 amod stand,neighbors
R7659 T13131 T13130 punct -,stand
R7660 T13132 T13130 prt in,stand
R7661 T13133 T13129 punct ',neighbors
R7662 T13134 T13129 amod mesenchymal,neighbors
R7663 T13135 T13136 punct [,47
R7664 T13136 T13116 parataxis 47,taken
R7665 T13137 T13136 punct ],47
R7666 T13138 T13116 punct .,taken
R7667 T13140 T13141 mark As,thought
R7668 T13141 T13146 advcl thought,is
R7669 T13142 T13141 nsubjpass recognition,thought
R7670 T13143 T13142 prep of,recognition
R7671 T13144 T13143 pobj phosphatidylserine,of
R7672 T13145 T13141 auxpass is,thought
R7673 T13147 T13148 aux to,be
R7674 T13148 T13141 xcomp be,thought
R7675 T13149 T13150 det a,mechanism
R7676 T13150 T13148 attr mechanism,be
R7677 T13151 T13150 amod universal,mechanism
R7678 T13152 T13150 compound engulfment,mechanism
R7679 T13153 T13150 prep for,mechanism
R7680 T13154 T13155 det all,cells
R7681 T13155 T13153 pobj cells,for
R7682 T13156 T13157 dep that,are
R7683 T13157 T13155 relcl are,cells
R7684 T13158 T13157 acomp able,are
R7685 T13159 T13160 aux to,phagocytose
R7686 T13160 T13158 xcomp phagocytose,able
R7687 T13161 T13162 amod apoptotic,cells
R7688 T13162 T13160 dobj cells,phagocytose
R7689 T13163 T13146 punct ", ",is
R7690 T13164 T13146 nsubj it,is
R7691 T13165 T13166 advmod very,striking
R7692 T13166 T13146 acomp striking,is
R7693 T13167 T13168 mark that,compromised
R7694 T13168 T13146 ccomp compromised,is
R7695 T13169 T13170 amod apoptotic,clearance
R7696 T13170 T13168 nsubjpass clearance,compromised
R7697 T13171 T13170 compound cell,clearance
R7698 T13172 T13170 acl mediated,clearance
R7699 T13173 T13172 agent by,mediated
R7700 T13174 T13175 amod non-professional,cells
R7701 T13175 T13173 pobj cells,by
R7702 T13176 T13175 compound bystander,cells
R7703 T13177 T13168 auxpass is,compromised
R7704 T13178 T13168 advmod also,compromised
R7705 T13179 T13168 neg not,compromised
R7706 T13180 T13168 agent by,compromised
R7707 T13181 T13182 compound Ptdsr,deficiency
R7708 T13182 T13180 pobj deficiency,by
R7709 T13183 T13182 punct -,deficiency
R7710 T13184 T13146 punct .,is

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12253 42-55 GO:0009790 denotes embryogenesis
T12254 57-67 CL:0000235 denotes macrophage
T12255 77-105 GO:0043277 denotes clearance of apoptotic cells
T12256 90-105 CL:0000445 denotes apoptotic cells
T12257 100-105 CL_GO_EXT:cell denotes cells
T12258 164-190 GO:0043277 denotes removal of apoptotic cells
T12259 175-190 CL:0000445 denotes apoptotic cells
T12260 185-190 CL_GO_EXT:cell denotes cells
T12261 200-207 UBERON:0000479 denotes tissues
T12262 214-235 GO:0012501 denotes programmed cell death
T12263 225-229 CL_GO_EXT:cell denotes cell
T12264 271-284 GO:0009790 denotes embryogenesis
T12265 312-325 UBERON:0005294 denotes genital ridge
T12266 333-338 UBERON:0000991 denotes gonad
T12267 333-352 GO:0035262 denotes gonad morphogenesis
T12268 357-372 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T12269 380-391 UBERON:0001049 denotes neural tube
T12270 415-427 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T12271 431-440 GO_PATO_EXT:apoptotic_process_or_quality denotes apoptotic
T12272 431-446 CL:0000445 denotes apoptotic cells
T12273 441-446 CL_GO_EXT:cell denotes cells
T12274 451-462 CL:0000235 denotes macrophages
T12275 499-527 GO:0043277 denotes clearance of apoptotic cells
T12276 512-527 CL:0000445 denotes apoptotic cells
T12277 522-527 CL_GO_EXT:cell denotes cells
T12278 576-581 CL_GO_EXT:cell denotes cells
T12279 597-608 CL:0000235 denotes macrophages
T12280 624-633 GO_EXT:biological_recruitment denotes recruited
T12281 651-660 GO:0006915 denotes apoptosis
T12282 737-742 PR_EXT:000009218 denotes Ptdsr
T12283 770-776 SO_EXT:sequence_altered_entity denotes mutant
T12284 818-828 CL:0000235 denotes macrophage
T12285 833-838 PR_EXT:000001944 denotes Sfpi1
T12286 848-855 UBERON:0000922 denotes embryos
T12287 883-896 GO:0030097 denotes hematopoietic
T12288 914-927 GO_EXT:transcription denotes transcription
T12289 914-934 GO_EXT:transcription_factor denotes transcription factor
T12290 935-939 PR_EXT:000001944 denotes PU.1
T12291 951-982 GO:0043277 denotes phagocytosis of apoptotic cells
T12292 967-982 CL:0000445 denotes apoptotic cells
T12293 977-982 CL_GO_EXT:cell denotes cells
T12294 990-1003 GO:0009790 denotes embryogenesis
T12295 1032-1043 UBERON:0003104 denotes mesenchymal
T12296 1078-1096 CHEBI:18303 denotes phosphatidylserine
T12297 1155-1160 CL_GO_EXT:cell denotes cells
T12298 1178-1189 GO:0006909 denotes phagocytose
T12299 1190-1199 GO_PATO_EXT:apoptotic_process_or_quality denotes apoptotic
T12300 1190-1205 CL:0000445 denotes apoptotic cells
T12301 1200-1205 CL_GO_EXT:cell denotes cells
T12302 1232-1246 CL:0000445 denotes apoptotic cell
T12303 1232-1256 GO:0043277 denotes apoptotic cell clearance
T12304 1242-1246 CL_GO_EXT:cell denotes cell
T12305 1296-1301 CL_GO_EXT:cell denotes cells
T12306 1329-1334 PR_EXT:000009218 denotes Ptdsr

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12000 42-55 GO:0009790 denotes embryogenesis
T12001 57-67 CL:0000235 denotes macrophage
T12002 77-105 GO:0043277 denotes clearance of apoptotic cells
T12003 90-105 CL:0000445 denotes apoptotic cells
T12004 164-190 GO:0043277 denotes removal of apoptotic cells
T12005 175-190 CL:0000445 denotes apoptotic cells
T12006 200-207 UBERON:0000479 denotes tissues
T12007 214-235 GO:0012501 denotes programmed cell death
T12008 271-284 GO:0009790 denotes embryogenesis
T12009 312-325 UBERON:0005294 denotes genital ridge
T12010 333-338 UBERON:0000991 denotes gonad
T12011 333-352 GO:0035262 denotes gonad morphogenesis
T12012 380-391 UBERON:0001049 denotes neural tube
T12013 431-446 CL:0000445 denotes apoptotic cells
T12014 451-462 CL:0000235 denotes macrophages
T12015 499-527 GO:0043277 denotes clearance of apoptotic cells
T12016 512-527 CL:0000445 denotes apoptotic cells
T12017 597-608 CL:0000235 denotes macrophages
T12018 651-660 GO:0006915 denotes apoptosis
T12019 737-742 PR:000009218 denotes Ptdsr
T12020 818-828 CL:0000235 denotes macrophage
T12021 833-838 PR:000001944 denotes Sfpi1
T12022 848-855 UBERON:0000922 denotes embryos
T12023 883-896 GO:0030097 denotes hematopoietic
T12024 935-939 PR:000001944 denotes PU.1
T12025 951-982 GO:0043277 denotes phagocytosis of apoptotic cells
T12026 967-982 CL:0000445 denotes apoptotic cells
T12027 990-1003 GO:0009790 denotes embryogenesis
T12028 1032-1043 UBERON:0003104 denotes mesenchymal
T12029 1078-1096 CHEBI:18303 denotes phosphatidylserine
T12030 1178-1189 GO:0006909 denotes phagocytose
T12031 1190-1205 CL:0000445 denotes apoptotic cells
T12032 1232-1246 CL:0000445 denotes apoptotic cell
T12033 1232-1256 GO:0043277 denotes apoptotic cell clearance
T12034 1329-1334 PR:000009218 denotes Ptdsr

2_test

Id Subject Object Predicate Lexical cue
15345036-11076747-55938547 1055-1057 11076747 denotes 47