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PMC:548520 / 32918-33608 JSONTXT

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craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8047 9-17 CHEBI:10545 denotes electron
T8048 76-102 UBERON:0001782 denotes retinal pigment epithelium
T8049 160-173 UBERON:0003902 denotes neural retina
T8050 175-182 UBERON:0000966 denotes Retinae
T8051 188-191 PR_EXT:000005904 denotes Crx
T8052 191-192 SO_EXT:sequence_nullness_or_absence denotes -
T8053 193-194 SO_EXT:sequence_nullness_or_absence denotes -
T8054 196-205 PR_EXT:000001245 denotes rhodopsin
T8055 205-206 SO_EXT:sequence_nullness_or_absence denotes -
T8056 207-208 SO_EXT:sequence_nullness_or_absence denotes -
T8057 210-213 PR_EXT:000013290 denotes RDS
T8058 218-226 SO_EXT:wild_type_entity_or_quality denotes wildtype
T8059 227-231 UBERON:0000970 denotes eyes
T8060 273-281 CHEBI:75958 denotes solution
T8061 301-315 CHEBI:64276 denotes glutaraldehyde
T8062 325-337 CHEBI:16842 denotes formaldehyde
T8063 356-362 UBERON:0000479 denotes Tissue
T8064 385-395 CHEBI:16223 denotes cacodylate
T8065 396-402 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T8066 441-448 CHEBI:16236 denotes ethanol
T8067 450-457 UBERON:0000479 denotes Tissues
T8068 500-514 CHEBI:16526 denotes carbon dioxide
T8069 570-574 CHEBI_EXT:gold denotes gold
T8070 575-584 CHEBI_EXT:palladium denotes palladium
T8071 670-678 CHEBI:10545 denotes electron

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8030 9-17 CHEBI:10545 denotes electron
T8031 76-102 UBERON:0001782 denotes retinal pigment epithelium
T8032 160-173 UBERON:0003902 denotes neural retina
T8033 175-182 UBERON:0000966 denotes Retinae
T8034 188-191 PR:000005904 denotes Crx
T8035 196-205 PR:000001245 denotes rhodopsin
T8036 210-213 PR:000013290 denotes RDS
T8037 227-231 UBERON:0000970 denotes eyes
T8038 273-281 CHEBI:75958 denotes solution
T8039 301-315 CHEBI:64276 denotes glutaraldehyde
T8040 325-337 CHEBI:16842 denotes formaldehyde
T8041 356-362 UBERON:0000479 denotes Tissue
T8042 385-395 CHEBI:16223 denotes cacodylate
T8043 441-448 CHEBI:16236 denotes ethanol
T8044 450-457 UBERON:0000479 denotes Tissues
T8045 500-514 CHEBI:16526 denotes carbon dioxide
T8046 670-678 CHEBI:10545 denotes electron

craft-sa-dev

Id Subject Object Predicate Lexical cue
T8072 0-8 VBG denotes Scanning
T8073 18-28 NN denotes microscopy
T8074 9-17 NN denotes electron
T8075 28-174 sentence denotes Specimens used for SEM required removal of the retinal pigment epithelium (PE), enabling visualization of the outer surface of the neural retina.
T8076 29-38 NNS denotes Specimens
T8077 52-60 VBD denotes required
T8078 39-43 VBN denotes used
T8079 44-47 IN denotes for
T8080 48-51 NN denotes SEM
T8081 61-68 NN denotes removal
T8082 69-71 IN denotes of
T8083 72-75 DT denotes the
T8084 92-102 NN denotes epithelium
T8085 76-83 JJ denotes retinal
T8086 84-91 NN denotes pigment
T8087 103-104 -LRB- denotes (
T8088 104-106 NN denotes PE
T8089 106-107 -RRB- denotes )
T8090 107-109 , denotes ,
T8091 109-117 VBG denotes enabling
T8092 118-131 NN denotes visualization
T8093 132-134 IN denotes of
T8094 135-138 DT denotes the
T8095 145-152 NN denotes surface
T8096 139-144 JJ denotes outer
T8097 153-155 IN denotes of
T8098 156-159 DT denotes the
T8099 167-173 NN denotes retina
T8100 160-166 JJ denotes neural
T8101 173-174 . denotes .
T8102 174-355 sentence denotes Retinae from Crx-/-, rhodopsin-/-, RDS, or wildtype eyes were dissected free from PE in a dispase solution and fixed in 1.25% glutaraldehyde and 1.0% formaldehyde overnight at 4°C.
T8103 175-182 NNS denotes Retinae
T8104 237-246 VBN denotes dissected
T8105 183-187 IN denotes from
T8106 188-191 NN denotes Crx
T8107 227-231 NNS denotes eyes
T8108 191-192 SYM denotes -
T8109 192-193 HYPH denotes /
T8110 193-194 SYM denotes -
T8111 194-196 , denotes ,
T8112 196-205 NN denotes rhodopsin
T8113 205-206 SYM denotes -
T8114 206-207 HYPH denotes /
T8115 207-208 SYM denotes -
T8116 208-210 , denotes ,
T8117 210-213 NN denotes RDS
T8118 213-215 , denotes ,
T8119 215-217 CC denotes or
T8120 218-226 NN denotes wildtype
T8121 232-236 VBD denotes were
T8122 247-251 JJ denotes free
T8123 252-256 IN denotes from
T8124 257-259 NN denotes PE
T8125 260-262 IN denotes in
T8126 263-264 DT denotes a
T8127 273-281 NN denotes solution
T8128 265-272 NN denotes dispase
T8129 282-285 CC denotes and
T8130 286-291 VBN denotes fixed
T8131 292-294 IN denotes in
T8132 295-299 CD denotes 1.25
T8133 299-300 NN denotes %
T8134 301-315 NN denotes glutaraldehyde
T8135 316-319 CC denotes and
T8136 320-323 CD denotes 1.0
T8137 323-324 NN denotes %
T8138 325-337 NN denotes formaldehyde
T8139 338-347 RB denotes overnight
T8140 348-350 IN denotes at
T8141 351-352 CD denotes 4
T8142 352-354 NN denotes °C
T8143 354-355 . denotes .
T8144 355-449 sentence denotes Tissue was then washed 5X in cacodylate buffer and dehydrated in ascending grades of ethanol.
T8145 356-362 NN denotes Tissue
T8146 372-378 VBN denotes washed
T8147 363-366 VBD denotes was
T8148 367-371 RB denotes then
T8149 379-380 CD denotes 5
T8150 380-381 SYM denotes X
T8151 382-384 IN denotes in
T8152 385-395 NN denotes cacodylate
T8153 396-402 NN denotes buffer
T8154 403-406 CC denotes and
T8155 407-417 VBN denotes dehydrated
T8156 418-420 IN denotes in
T8157 421-430 VBG denotes ascending
T8158 431-437 NNS denotes grades
T8159 438-440 IN denotes of
T8160 441-448 NN denotes ethanol
T8161 448-449 . denotes .
T8162 449-515 sentence denotes Tissues were subsequently critical point dried in carbon dioxide.
T8163 450-457 NNS denotes Tissues
T8164 491-496 VBN denotes dried
T8165 458-462 VBD denotes were
T8166 463-475 RB denotes subsequently
T8167 476-484 JJ denotes critical
T8168 485-490 NN denotes point
T8169 497-499 IN denotes in
T8170 500-506 NN denotes carbon
T8171 507-514 NN denotes dioxide
T8172 514-515 . denotes .
T8173 515-613 sentence denotes All specimens were mounted and coated with sublimated gold-palladium by the sputtering technique.
T8174 516-519 DT denotes All
T8175 520-529 NNS denotes specimens
T8176 535-542 VBN denotes mounted
T8177 530-534 VBD denotes were
T8178 543-546 CC denotes and
T8179 547-553 VBN denotes coated
T8180 554-558 IN denotes with
T8181 559-569 VBN denotes sublimated
T8182 575-584 NN denotes palladium
T8183 570-574 NN denotes gold
T8184 574-575 HYPH denotes -
T8185 585-587 IN denotes by
T8186 588-591 DT denotes the
T8187 603-612 NN denotes technique
T8188 592-602 NN denotes sputtering
T8189 612-613 . denotes .
T8190 613-690 sentence denotes Micrographs were obtained with a Jeol JSM-35CF scanning electron microscope.
T8191 614-625 NNS denotes Micrographs
T8192 631-639 VBN denotes obtained
T8193 626-630 VBD denotes were
T8194 640-644 IN denotes with
T8195 645-646 DT denotes a
T8196 679-689 NN denotes microscope
T8197 647-651 NNP denotes Jeol
T8198 656-660 NNP denotes 35CF
T8199 652-655 NNP denotes JSM
T8200 655-656 HYPH denotes -
T8201 661-669 VBG denotes scanning
T8202 670-678 NN denotes electron
T8203 689-690 . denotes .
R4942 T8072 T8073 amod Scanning,microscopy
R4943 T8074 T8073 compound electron,microscopy
R4944 T8076 T8077 nsubj Specimens,required
R4945 T8078 T8076 acl used,Specimens
R4946 T8079 T8078 prep for,used
R4947 T8080 T8079 pobj SEM,for
R4948 T8081 T8077 dobj removal,required
R4949 T8082 T8081 prep of,removal
R4950 T8083 T8084 det the,epithelium
R4951 T8084 T8082 pobj epithelium,of
R4952 T8085 T8084 amod retinal,epithelium
R4953 T8086 T8084 compound pigment,epithelium
R4954 T8087 T8084 punct (,epithelium
R4955 T8088 T8084 appos PE,epithelium
R4956 T8089 T8077 punct ),required
R4957 T8090 T8077 punct ", ",required
R4958 T8091 T8077 advcl enabling,required
R4959 T8092 T8091 dobj visualization,enabling
R4960 T8093 T8092 prep of,visualization
R4961 T8094 T8095 det the,surface
R4962 T8095 T8093 pobj surface,of
R4963 T8096 T8095 amod outer,surface
R4964 T8097 T8095 prep of,surface
R4965 T8098 T8099 det the,retina
R4966 T8099 T8097 pobj retina,of
R4967 T8100 T8099 amod neural,retina
R4968 T8101 T8077 punct .,required
R4969 T8103 T8104 nsubjpass Retinae,dissected
R4970 T8105 T8103 prep from,Retinae
R4971 T8106 T8107 nmod Crx,eyes
R4972 T8107 T8105 pobj eyes,from
R4973 T8108 T8106 punct -,Crx
R4974 T8109 T8106 punct /,Crx
R4975 T8110 T8106 punct -,Crx
R4976 T8111 T8106 punct ", ",Crx
R4977 T8112 T8106 conj rhodopsin,Crx
R4978 T8113 T8112 punct -,rhodopsin
R4979 T8114 T8112 punct /,rhodopsin
R4980 T8115 T8112 punct -,rhodopsin
R4981 T8116 T8112 punct ", ",rhodopsin
R4982 T8117 T8112 conj RDS,rhodopsin
R4983 T8118 T8117 punct ", ",RDS
R4984 T8119 T8117 cc or,RDS
R4985 T8120 T8117 conj wildtype,RDS
R4986 T8121 T8104 auxpass were,dissected
R4987 T8122 T8104 oprd free,dissected
R4988 T8123 T8122 prep from,free
R4989 T8124 T8123 pobj PE,from
R4990 T8125 T8104 prep in,dissected
R4991 T8126 T8127 det a,solution
R4992 T8127 T8125 pobj solution,in
R4993 T8128 T8127 compound dispase,solution
R4994 T8129 T8104 cc and,dissected
R4995 T8130 T8104 conj fixed,dissected
R4996 T8131 T8130 prep in,fixed
R4997 T8132 T8133 nummod 1.25,%
R4998 T8133 T8134 compound %,glutaraldehyde
R4999 T8134 T8131 pobj glutaraldehyde,in
R5000 T8135 T8134 cc and,glutaraldehyde
R5001 T8136 T8137 nummod 1.0,%
R5002 T8137 T8138 compound %,formaldehyde
R5003 T8138 T8134 conj formaldehyde,glutaraldehyde
R5004 T8139 T8130 advmod overnight,fixed
R5005 T8140 T8130 prep at,fixed
R5006 T8141 T8142 nummod 4,°C
R5007 T8142 T8140 pobj °C,at
R5008 T8143 T8104 punct .,dissected
R5009 T8145 T8146 nsubjpass Tissue,washed
R5010 T8147 T8146 auxpass was,washed
R5011 T8148 T8146 advmod then,washed
R5012 T8149 T8146 npadvmod 5,washed
R5013 T8150 T8149 punct X,5
R5014 T8151 T8146 prep in,washed
R5015 T8152 T8153 compound cacodylate,buffer
R5016 T8153 T8151 pobj buffer,in
R5017 T8154 T8146 cc and,washed
R5018 T8155 T8146 conj dehydrated,washed
R5019 T8156 T8155 prep in,dehydrated
R5020 T8157 T8158 amod ascending,grades
R5021 T8158 T8156 pobj grades,in
R5022 T8159 T8158 prep of,grades
R5023 T8160 T8159 pobj ethanol,of
R5024 T8161 T8146 punct .,washed
R5025 T8163 T8164 nsubjpass Tissues,dried
R5026 T8165 T8164 auxpass were,dried
R5027 T8166 T8164 advmod subsequently,dried
R5028 T8167 T8168 amod critical,point
R5029 T8168 T8164 npadvmod point,dried
R5030 T8169 T8164 prep in,dried
R5031 T8170 T8171 compound carbon,dioxide
R5032 T8171 T8169 pobj dioxide,in
R5033 T8172 T8164 punct .,dried
R5034 T8174 T8175 det All,specimens
R5035 T8175 T8176 nsubjpass specimens,mounted
R5036 T8177 T8176 auxpass were,mounted
R5037 T8178 T8176 cc and,mounted
R5038 T8179 T8176 conj coated,mounted
R5039 T8180 T8179 prep with,coated
R5040 T8181 T8182 amod sublimated,palladium
R5041 T8182 T8180 pobj palladium,with
R5042 T8183 T8182 compound gold,palladium
R5043 T8184 T8182 punct -,palladium
R5044 T8185 T8179 prep by,coated
R5045 T8186 T8187 det the,technique
R5046 T8187 T8185 pobj technique,by
R5047 T8188 T8187 compound sputtering,technique
R5048 T8189 T8176 punct .,mounted
R5049 T8191 T8192 nsubjpass Micrographs,obtained
R5050 T8193 T8192 auxpass were,obtained
R5051 T8194 T8192 prep with,obtained
R5052 T8195 T8196 det a,microscope
R5053 T8196 T8194 pobj microscope,with
R5054 T8197 T8198 nmod Jeol,35CF
R5055 T8198 T8196 nmod 35CF,microscope
R5056 T8199 T8198 nmod JSM,35CF
R5057 T8200 T8198 punct -,35CF
R5058 T8201 T8196 amod scanning,microscope
R5059 T8202 T8196 compound electron,microscope
R5060 T8203 T8192 punct .,obtained