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PMC:548520 / 31783-32349 JSONTXT

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craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T7746 11-14 PR_EXT:000005904 denotes Crx
T7747 14-15 SO_EXT:sequence_nullness_or_absence denotes -
T7748 16-17 SO_EXT:sequence_nullness_or_absence denotes -
T7749 22-30 SO_EXT:wild_type_entity_or_quality denotes wildtype
T7750 31-35 NCBITaxon_UBERON_EXT:pup denotes pups
T7751 56-68 CHEBI:16842 denotes formaldehyde
T7752 78-92 CHEBI:64276 denotes glutaraldehyde
T7753 108-113 GO:0007567 denotes natal
T7754 126-130 UBERON:0000970 denotes eyes
T7755 161-167 UBERON:0000964 denotes cornea
T7756 172-176 UBERON_EXT:lens denotes lens
T7757 195-198 UBERON:0000970 denotes eye
T7758 219-227 CHEBI_EXT:50913 denotes fixative
T7759 232-244 CHEBI:16842 denotes formaldehyde
T7760 254-268 CHEBI:64276 denotes glutaraldehyde
T7761 299-305 UBERON:0001773 denotes sclera
T7762 341-348 UBERON:0000966 denotes retinas
T7763 393-409 CHEBI_EXT:paraformaldehye denotes paraformaldehyde
T7764 419-433 CHEBI:64276 denotes glutaraldehyde
T7765 537-550 CL:0000210 denotes photoreceptor
T7766 537-565 GO:0001750 denotes photoreceptor outer segments

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T7723 11-14 PR:000005904 denotes Crx
T7724 56-68 CHEBI:16842 denotes formaldehyde
T7725 78-92 CHEBI:64276 denotes glutaraldehyde
T7726 108-113 GO:0007567 denotes natal
T7727 126-130 UBERON:0000970 denotes eyes
T7728 161-167 UBERON:0000964 denotes cornea
T7729 195-198 UBERON:0000970 denotes eye
T7730 219-227 CHEBI:50913 denotes fixative
T7731 232-244 CHEBI:16842 denotes formaldehyde
T7732 254-268 CHEBI:64276 denotes glutaraldehyde
T7733 299-305 UBERON:0001773 denotes sclera
T7734 341-348 UBERON:0000966 denotes retinas
T7735 419-433 CHEBI:64276 denotes glutaraldehyde
T7736 537-550 CL:0000210 denotes photoreceptor
T7737 537-565 GO:0001750 denotes photoreceptor outer segments

craft-sa-dev

Id Subject Object Predicate Lexical cue
T7783 0-10 NN denotes Littermate
T7784 31-35 NNS denotes pups
T7785 11-14 NN denotes Crx
T7786 14-15 SYM denotes -
T7787 15-16 HYPH denotes /
T7788 16-17 SYM denotes -
T7789 18-21 CC denotes and
T7790 22-30 JJ denotes wildtype
T7791 41-49 VBN denotes perfused
T7792 36-40 VBD denotes were
T7793 50-52 IN denotes in
T7794 53-54 CD denotes 1
T7795 54-55 NN denotes %
T7796 56-68 NN denotes formaldehyde
T7797 69-72 CC denotes and
T7798 73-76 CD denotes 0.5
T7799 76-77 NN denotes %
T7800 78-92 NN denotes glutaraldehyde
T7801 93-95 IN denotes at
T7802 96-103 JJ denotes various
T7803 114-120 NNS denotes stages
T7804 104-113 JJ denotes postnatal
T7805 120-121 . denotes .
T7806 121-190 sentence denotes The eyes were then enucleated, and the cornea and lens were removed.
T7807 122-125 DT denotes The
T7808 126-130 NNS denotes eyes
T7809 141-151 VBN denotes enucleated
T7810 131-135 VBD denotes were
T7811 136-140 RB denotes then
T7812 151-153 , denotes ,
T7813 153-156 CC denotes and
T7814 157-160 DT denotes the
T7815 161-167 NN denotes cornea
T7816 182-189 VBN denotes removed
T7817 168-171 CC denotes and
T7818 172-176 NN denotes lens
T7819 177-181 VBD denotes were
T7820 189-190 . denotes .
T7821 190-294 sentence denotes The eye cup was immersed in fixative (1% formaldehyde and 2.5% glutaraldehyde) for 3 to 4 hours at 4°C.
T7822 191-194 DT denotes The
T7823 199-202 NN denotes cup
T7824 195-198 NN denotes eye
T7825 207-215 VBN denotes immersed
T7826 203-206 VBD denotes was
T7827 216-218 IN denotes in
T7828 219-227 NN denotes fixative
T7829 228-229 -LRB- denotes (
T7830 229-230 CD denotes 1
T7831 230-231 NN denotes %
T7832 232-244 NN denotes formaldehyde
T7833 245-248 CC denotes and
T7834 249-252 CD denotes 2.5
T7835 252-253 NN denotes %
T7836 254-268 NN denotes glutaraldehyde
T7837 268-269 -RRB- denotes )
T7838 270-273 IN denotes for
T7839 274-275 CD denotes 3
T7840 279-280 CD denotes 4
T7841 276-278 IN denotes to
T7842 281-286 NNS denotes hours
T7843 287-289 IN denotes at
T7844 290-291 CD denotes 4
T7845 291-293 NN denotes °C
T7846 293-294 . denotes .
T7847 294-452 sentence denotes The sclera was then partially removed and the retinas were sliced into small pieces and fixed (1% paraformaldehyde and 2.5% glutaraldehyde) overnight at 4°C.
T7848 295-298 DT denotes The
T7849 299-305 NN denotes sclera
T7850 325-332 VBN denotes removed
T7851 306-309 VBD denotes was
T7852 310-314 RB denotes then
T7853 315-324 RB denotes partially
T7854 333-336 CC denotes and
T7855 337-340 DT denotes the
T7856 341-348 NNS denotes retinas
T7857 354-360 VBN denotes sliced
T7858 349-353 VBD denotes were
T7859 361-365 IN denotes into
T7860 366-371 JJ denotes small
T7861 372-378 NNS denotes pieces
T7862 379-382 CC denotes and
T7863 383-388 VBN denotes fixed
T7864 389-390 -LRB- denotes (
T7865 393-409 NN denotes paraformaldehyde
T7866 390-391 CD denotes 1
T7867 391-392 NN denotes %
T7868 410-413 CC denotes and
T7869 414-417 CD denotes 2.5
T7870 417-418 NN denotes %
T7871 419-433 NN denotes glutaraldehyde
T7872 433-434 -RRB- denotes )
T7873 435-444 RB denotes overnight
T7874 445-447 IN denotes at
T7875 448-449 CD denotes 4
T7876 449-451 NN denotes °C
T7877 451-452 . denotes .
T7878 452-566 sentence denotes These procedures were found optimal for maintaining the structural integrity of the photoreceptor outer segments.
T7879 453-458 DT denotes These
T7880 459-469 NNS denotes procedures
T7881 475-480 VBN denotes found
T7882 470-474 VBD denotes were
T7883 481-488 JJ denotes optimal
T7884 489-492 IN denotes for
T7885 493-504 VBG denotes maintaining
T7886 505-508 DT denotes the
T7887 520-529 NN denotes integrity
T7888 509-519 JJ denotes structural
T7889 530-532 IN denotes of
T7890 533-536 DT denotes the
T7891 557-565 NNS denotes segments
T7892 537-550 NN denotes photoreceptor
T7893 551-556 JJ denotes outer
T7894 565-566 . denotes .
R4726 T7783 T7784 nmod Littermate,pups
R4727 T7784 T7791 nsubjpass pups,perfused
R4728 T7785 T7784 nmod Crx,pups
R4729 T7786 T7785 punct -,Crx
R4730 T7787 T7785 punct /,Crx
R4731 T7788 T7785 punct -,Crx
R4732 T7789 T7785 cc and,Crx
R4733 T7790 T7785 conj wildtype,Crx
R4734 T7792 T7791 auxpass were,perfused
R4735 T7793 T7791 prep in,perfused
R4736 T7794 T7795 nummod 1,%
R4737 T7795 T7796 compound %,formaldehyde
R4738 T7796 T7793 pobj formaldehyde,in
R4739 T7797 T7796 cc and,formaldehyde
R4740 T7798 T7799 nummod 0.5,%
R4741 T7799 T7800 compound %,glutaraldehyde
R4742 T7800 T7796 conj glutaraldehyde,formaldehyde
R4743 T7801 T7791 prep at,perfused
R4744 T7802 T7803 amod various,stages
R4745 T7803 T7801 pobj stages,at
R4746 T7804 T7803 amod postnatal,stages
R4747 T7805 T7791 punct .,perfused
R4748 T7807 T7808 det The,eyes
R4749 T7808 T7809 nsubjpass eyes,enucleated
R4750 T7810 T7809 auxpass were,enucleated
R4751 T7811 T7809 advmod then,enucleated
R4752 T7812 T7809 punct ", ",enucleated
R4753 T7813 T7809 cc and,enucleated
R4754 T7814 T7815 det the,cornea
R4755 T7815 T7816 nsubjpass cornea,removed
R4756 T7816 T7809 conj removed,enucleated
R4757 T7817 T7815 cc and,cornea
R4758 T7818 T7815 conj lens,cornea
R4759 T7819 T7816 auxpass were,removed
R4760 T7820 T7816 punct .,removed
R4761 T7822 T7823 det The,cup
R4762 T7823 T7825 nsubjpass cup,immersed
R4763 T7824 T7823 compound eye,cup
R4764 T7826 T7825 auxpass was,immersed
R4765 T7827 T7825 prep in,immersed
R4766 T7828 T7827 pobj fixative,in
R4767 T7829 T7828 punct (,fixative
R4768 T7830 T7831 nummod 1,%
R4769 T7831 T7832 compound %,formaldehyde
R4770 T7832 T7828 appos formaldehyde,fixative
R4771 T7833 T7832 cc and,formaldehyde
R4772 T7834 T7835 nummod 2.5,%
R4773 T7835 T7836 compound %,glutaraldehyde
R4774 T7836 T7832 conj glutaraldehyde,formaldehyde
R4775 T7837 T7828 punct ),fixative
R4776 T7838 T7825 prep for,immersed
R4777 T7839 T7840 quantmod 3,4
R4778 T7840 T7842 nummod 4,hours
R4779 T7841 T7840 quantmod to,4
R4780 T7842 T7838 pobj hours,for
R4781 T7843 T7825 prep at,immersed
R4782 T7844 T7845 nummod 4,°C
R4783 T7845 T7843 pobj °C,at
R4784 T7846 T7825 punct .,immersed
R4785 T7848 T7849 det The,sclera
R4786 T7849 T7850 nsubjpass sclera,removed
R4787 T7851 T7850 auxpass was,removed
R4788 T7852 T7850 advmod then,removed
R4789 T7853 T7850 advmod partially,removed
R4790 T7854 T7850 cc and,removed
R4791 T7855 T7856 det the,retinas
R4792 T7856 T7857 nsubjpass retinas,sliced
R4793 T7857 T7850 conj sliced,removed
R4794 T7858 T7857 auxpass were,sliced
R4795 T7859 T7857 prep into,sliced
R4796 T7860 T7861 amod small,pieces
R4797 T7861 T7859 pobj pieces,into
R4798 T7862 T7857 cc and,sliced
R4799 T7863 T7857 conj fixed,sliced
R4800 T7864 T7865 punct (,paraformaldehyde
R4801 T7865 T7863 parataxis paraformaldehyde,fixed
R4802 T7866 T7867 nummod 1,%
R4803 T7867 T7865 compound %,paraformaldehyde
R4804 T7868 T7865 cc and,paraformaldehyde
R4805 T7869 T7870 nummod 2.5,%
R4806 T7870 T7871 compound %,glutaraldehyde
R4807 T7871 T7865 conj glutaraldehyde,paraformaldehyde
R4808 T7872 T7865 punct ),paraformaldehyde
R4809 T7873 T7863 advmod overnight,fixed
R4810 T7874 T7863 prep at,fixed
R4811 T7875 T7876 nummod 4,°C
R4812 T7876 T7874 pobj °C,at
R4813 T7877 T7857 punct .,sliced
R4814 T7879 T7880 det These,procedures
R4815 T7880 T7881 nsubjpass procedures,found
R4816 T7882 T7881 auxpass were,found
R4817 T7883 T7881 oprd optimal,found
R4818 T7884 T7883 prep for,optimal
R4819 T7885 T7884 pcomp maintaining,for
R4820 T7886 T7887 det the,integrity
R4821 T7887 T7885 dobj integrity,maintaining
R4822 T7888 T7887 amod structural,integrity
R4823 T7889 T7887 prep of,integrity
R4824 T7890 T7891 det the,segments
R4825 T7891 T7889 pobj segments,of
R4826 T7892 T7891 nmod photoreceptor,segments
R4827 T7893 T7891 amod outer,segments
R4828 T7894 T7881 punct .,found