Id |
Subject |
Object |
Predicate |
Lexical cue |
T4911 |
0-2 |
IN |
denotes |
In |
T4912 |
62-68 |
VBZ |
denotes |
occurs |
T4913 |
3-13 |
VBG |
denotes |
developing |
T4914 |
14-28 |
NNS |
denotes |
photoreceptors |
T4915 |
28-30 |
, |
denotes |
, |
T4916 |
30-32 |
DT |
denotes |
an |
T4917 |
54-61 |
NN |
denotes |
process |
T4918 |
33-46 |
JJ |
denotes |
extraordinary |
T4919 |
47-53 |
NN |
denotes |
growth |
T4920 |
69-76 |
WRB |
denotes |
whereby |
T4921 |
98-107 |
VBN |
denotes |
generated |
T4922 |
77-80 |
DT |
denotes |
the |
T4923 |
87-94 |
NN |
denotes |
segment |
T4924 |
81-86 |
JJ |
denotes |
outer |
T4925 |
95-97 |
VBZ |
denotes |
is |
T4926 |
108-112 |
IN |
denotes |
from |
T4927 |
113-116 |
DT |
denotes |
the |
T4928 |
136-142 |
NN |
denotes |
cilium |
T4929 |
117-124 |
JJ |
denotes |
nascent |
T4930 |
125-135 |
VBG |
denotes |
connecting |
T4931 |
143-144 |
-LRB- |
denotes |
( |
T4932 |
144-147 |
VB |
denotes |
see |
T4933 |
148-149 |
-LRB- |
denotes |
[ |
T4934 |
149-151 |
CD |
denotes |
38 |
T4935 |
151-152 |
-RRB- |
denotes |
] |
T4936 |
153-156 |
CC |
denotes |
and |
T4937 |
157-167 |
NNS |
denotes |
references |
T4938 |
168-175 |
RB |
denotes |
therein |
T4939 |
175-176 |
-RRB- |
denotes |
) |
T4940 |
176-177 |
. |
denotes |
. |
T4941 |
177-381 |
sentence |
denotes |
Peripherin/RDS and ROM-1 proteins (localized in disc rims) and the opsin proteins (localized throughout the discs) have important roles in the structural integrity of mature outer segments (see [39,29]). |
T4942 |
178-188 |
NN |
denotes |
Peripherin |
T4943 |
189-192 |
NN |
denotes |
RDS |
T4944 |
188-189 |
HYPH |
denotes |
/ |
T4945 |
203-211 |
NN |
denotes |
proteins |
T4946 |
193-196 |
CC |
denotes |
and |
T4947 |
197-200 |
NN |
denotes |
ROM |
T4948 |
200-201 |
HYPH |
denotes |
- |
T4949 |
201-202 |
CD |
denotes |
1 |
T4950 |
293-297 |
VBP |
denotes |
have |
T4951 |
212-213 |
-LRB- |
denotes |
( |
T4952 |
213-222 |
VBN |
denotes |
localized |
T4953 |
223-225 |
IN |
denotes |
in |
T4954 |
226-230 |
NN |
denotes |
disc |
T4955 |
231-235 |
NNS |
denotes |
rims |
T4956 |
235-236 |
-RRB- |
denotes |
) |
T4957 |
237-240 |
CC |
denotes |
and |
T4958 |
241-244 |
DT |
denotes |
the |
T4959 |
251-259 |
NN |
denotes |
proteins |
T4960 |
245-250 |
NN |
denotes |
opsin |
T4961 |
260-261 |
-LRB- |
denotes |
( |
T4962 |
261-270 |
VBN |
denotes |
localized |
T4963 |
271-281 |
IN |
denotes |
throughout |
T4964 |
282-285 |
DT |
denotes |
the |
T4965 |
286-291 |
NNS |
denotes |
discs |
T4966 |
291-292 |
-RRB- |
denotes |
) |
T4967 |
298-307 |
JJ |
denotes |
important |
T4968 |
308-313 |
NNS |
denotes |
roles |
T4969 |
314-316 |
IN |
denotes |
in |
T4970 |
317-320 |
DT |
denotes |
the |
T4971 |
332-341 |
NN |
denotes |
integrity |
T4972 |
321-331 |
JJ |
denotes |
structural |
T4973 |
342-344 |
IN |
denotes |
of |
T4974 |
345-351 |
JJ |
denotes |
mature |
T4975 |
358-366 |
NNS |
denotes |
segments |
T4976 |
352-357 |
JJ |
denotes |
outer |
T4977 |
367-368 |
-LRB- |
denotes |
( |
T4978 |
368-371 |
VB |
denotes |
see |
T4979 |
372-373 |
-LRB- |
denotes |
[ |
T4980 |
373-375 |
CD |
denotes |
39 |
T4981 |
376-378 |
CD |
denotes |
29 |
T4982 |
375-376 |
, |
denotes |
, |
T4983 |
378-379 |
-RRB- |
denotes |
] |
T4984 |
379-380 |
-RRB- |
denotes |
) |
T4985 |
380-381 |
. |
denotes |
. |
T4986 |
381-454 |
sentence |
denotes |
ROM-1-/- mice produce disorganized outer segments with large disks [40]. |
T4987 |
382-385 |
NN |
denotes |
ROM |
T4988 |
391-395 |
NNS |
denotes |
mice |
T4989 |
385-386 |
HYPH |
denotes |
- |
T4990 |
386-387 |
CD |
denotes |
1 |
T4991 |
387-388 |
SYM |
denotes |
- |
T4992 |
388-389 |
HYPH |
denotes |
/ |
T4993 |
389-390 |
SYM |
denotes |
- |
T4994 |
396-403 |
VBP |
denotes |
produce |
T4995 |
404-416 |
VBN |
denotes |
disorganized |
T4996 |
423-431 |
NNS |
denotes |
segments |
T4997 |
417-422 |
JJ |
denotes |
outer |
T4998 |
432-436 |
IN |
denotes |
with |
T4999 |
437-442 |
JJ |
denotes |
large |
T5000 |
443-448 |
NNS |
denotes |
disks |
T5001 |
449-450 |
-LRB- |
denotes |
[ |
T5002 |
450-452 |
CD |
denotes |
40 |
T5003 |
452-453 |
-RRB- |
denotes |
] |
T5004 |
453-454 |
. |
denotes |
. |
T5005 |
454-658 |
sentence |
denotes |
Crx, by virtue of being a transcription factor, presumably controls genes that are responsible for the building and perhaps maintenance of the outer segment structure, including rhodopsin and peripherin. |
T5006 |
455-458 |
NN |
denotes |
Crx |
T5007 |
514-522 |
VBZ |
denotes |
controls |
T5008 |
458-460 |
, |
denotes |
, |
T5009 |
460-462 |
IN |
denotes |
by |
T5010 |
463-469 |
NN |
denotes |
virtue |
T5011 |
470-472 |
IN |
denotes |
of |
T5012 |
473-478 |
VBG |
denotes |
being |
T5013 |
479-480 |
DT |
denotes |
a |
T5014 |
495-501 |
NN |
denotes |
factor |
T5015 |
481-494 |
NN |
denotes |
transcription |
T5016 |
501-503 |
, |
denotes |
, |
T5017 |
503-513 |
RB |
denotes |
presumably |
T5018 |
523-528 |
NNS |
denotes |
genes |
T5019 |
529-533 |
WDT |
denotes |
that |
T5020 |
534-537 |
VBP |
denotes |
are |
T5021 |
538-549 |
JJ |
denotes |
responsible |
T5022 |
550-553 |
IN |
denotes |
for |
T5023 |
554-557 |
DT |
denotes |
the |
T5024 |
558-566 |
NN |
denotes |
building |
T5025 |
567-570 |
CC |
denotes |
and |
T5026 |
571-578 |
RB |
denotes |
perhaps |
T5027 |
579-590 |
NN |
denotes |
maintenance |
T5028 |
591-593 |
IN |
denotes |
of |
T5029 |
594-597 |
DT |
denotes |
the |
T5030 |
612-621 |
NN |
denotes |
structure |
T5031 |
598-603 |
JJ |
denotes |
outer |
T5032 |
604-611 |
NN |
denotes |
segment |
T5033 |
621-623 |
, |
denotes |
, |
T5034 |
623-632 |
VBG |
denotes |
including |
T5035 |
633-642 |
NN |
denotes |
rhodopsin |
T5036 |
643-646 |
CC |
denotes |
and |
T5037 |
647-657 |
NN |
denotes |
peripherin |
T5038 |
657-658 |
. |
denotes |
. |
T5039 |
658-854 |
sentence |
denotes |
Using northern blots [34], microarrays [10], and serial analysis of gene expression (SAGE) [35], we have defined a large number of genes that are altered in their expression level in Crx-/- mice. |
T5040 |
659-664 |
VBG |
denotes |
Using |
T5041 |
764-771 |
VBN |
denotes |
defined |
T5042 |
665-673 |
NNP |
denotes |
northern |
T5043 |
674-679 |
NNS |
denotes |
blots |
T5044 |
680-681 |
-LRB- |
denotes |
[ |
T5045 |
681-683 |
CD |
denotes |
34 |
T5046 |
683-684 |
-RRB- |
denotes |
] |
T5047 |
684-686 |
, |
denotes |
, |
T5048 |
686-697 |
NNS |
denotes |
microarrays |
T5049 |
698-699 |
-LRB- |
denotes |
[ |
T5050 |
699-701 |
CD |
denotes |
10 |
T5051 |
701-702 |
-RRB- |
denotes |
] |
T5052 |
702-704 |
, |
denotes |
, |
T5053 |
704-707 |
CC |
denotes |
and |
T5054 |
708-714 |
JJ |
denotes |
serial |
T5055 |
715-723 |
NN |
denotes |
analysis |
T5056 |
724-726 |
IN |
denotes |
of |
T5057 |
727-731 |
NN |
denotes |
gene |
T5058 |
732-742 |
NN |
denotes |
expression |
T5059 |
743-744 |
-LRB- |
denotes |
( |
T5060 |
744-748 |
NN |
denotes |
SAGE |
T5061 |
748-749 |
-RRB- |
denotes |
) |
T5062 |
750-751 |
-LRB- |
denotes |
[ |
T5063 |
751-753 |
CD |
denotes |
35 |
T5064 |
753-754 |
-RRB- |
denotes |
] |
T5065 |
754-756 |
, |
denotes |
, |
T5066 |
756-758 |
PRP |
denotes |
we |
T5067 |
759-763 |
VBP |
denotes |
have |
T5068 |
772-773 |
DT |
denotes |
a |
T5069 |
780-786 |
NN |
denotes |
number |
T5070 |
774-779 |
JJ |
denotes |
large |
T5071 |
787-789 |
IN |
denotes |
of |
T5072 |
790-795 |
NNS |
denotes |
genes |
T5073 |
796-800 |
WDT |
denotes |
that |
T5074 |
805-812 |
VBN |
denotes |
altered |
T5075 |
801-804 |
VBP |
denotes |
are |
T5076 |
813-815 |
IN |
denotes |
in |
T5077 |
816-821 |
PRP$ |
denotes |
their |
T5078 |
833-838 |
NN |
denotes |
level |
T5079 |
822-832 |
NN |
denotes |
expression |
T5080 |
839-841 |
IN |
denotes |
in |
T5081 |
842-845 |
NN |
denotes |
Crx |
T5082 |
849-853 |
NNS |
denotes |
mice |
T5083 |
845-846 |
SYM |
denotes |
- |
T5084 |
846-847 |
HYPH |
denotes |
/ |
T5085 |
847-848 |
SYM |
denotes |
- |
T5086 |
853-854 |
. |
denotes |
. |
T5087 |
854-986 |
sentence |
denotes |
We found that rhodopsin expression was severely diminished in Crx-/- animals, and peripherin mRNA was reduced by approximately 30%. |
T5088 |
855-857 |
PRP |
denotes |
We |
T5089 |
858-863 |
VBD |
denotes |
found |
T5090 |
864-868 |
IN |
denotes |
that |
T5091 |
903-913 |
VBN |
denotes |
diminished |
T5092 |
869-878 |
NN |
denotes |
rhodopsin |
T5093 |
879-889 |
NN |
denotes |
expression |
T5094 |
890-893 |
VBD |
denotes |
was |
T5095 |
894-902 |
RB |
denotes |
severely |
T5096 |
914-916 |
IN |
denotes |
in |
T5097 |
917-920 |
NN |
denotes |
Crx |
T5098 |
924-931 |
NNS |
denotes |
animals |
T5099 |
920-921 |
SYM |
denotes |
- |
T5100 |
921-922 |
HYPH |
denotes |
/ |
T5101 |
922-923 |
SYM |
denotes |
- |
T5102 |
931-933 |
, |
denotes |
, |
T5103 |
933-936 |
CC |
denotes |
and |
T5104 |
937-947 |
NN |
denotes |
peripherin |
T5105 |
948-952 |
NN |
denotes |
mRNA |
T5106 |
957-964 |
VBN |
denotes |
reduced |
T5107 |
953-956 |
VBD |
denotes |
was |
T5108 |
965-967 |
IN |
denotes |
by |
T5109 |
968-981 |
RB |
denotes |
approximately |
T5110 |
982-984 |
CD |
denotes |
30 |
T5111 |
984-985 |
NN |
denotes |
% |
T5112 |
985-986 |
. |
denotes |
. |
T5113 |
986-1155 |
sentence |
denotes |
Transgenic mice with variable levels of expression of wild type rhodopsin exhibit rod degeneration [41], indicating the importance of the level of rhodopsin expression. |
T5114 |
987-997 |
JJ |
denotes |
Transgenic |
T5115 |
998-1002 |
NNS |
denotes |
mice |
T5116 |
1061-1068 |
VBP |
denotes |
exhibit |
T5117 |
1003-1007 |
IN |
denotes |
with |
T5118 |
1008-1016 |
JJ |
denotes |
variable |
T5119 |
1017-1023 |
NNS |
denotes |
levels |
T5120 |
1024-1026 |
IN |
denotes |
of |
T5121 |
1027-1037 |
NN |
denotes |
expression |
T5122 |
1038-1040 |
IN |
denotes |
of |
T5123 |
1041-1045 |
JJ |
denotes |
wild |
T5124 |
1046-1050 |
NN |
denotes |
type |
T5125 |
1051-1060 |
NN |
denotes |
rhodopsin |
T5126 |
1069-1072 |
NN |
denotes |
rod |
T5127 |
1073-1085 |
NN |
denotes |
degeneration |
T5128 |
1086-1087 |
-LRB- |
denotes |
[ |
T5129 |
1087-1089 |
CD |
denotes |
41 |
T5130 |
1089-1090 |
-RRB- |
denotes |
] |
T5131 |
1090-1092 |
, |
denotes |
, |
T5132 |
1092-1102 |
VBG |
denotes |
indicating |
T5133 |
1103-1106 |
DT |
denotes |
the |
T5134 |
1107-1117 |
NN |
denotes |
importance |
T5135 |
1118-1120 |
IN |
denotes |
of |
T5136 |
1121-1124 |
DT |
denotes |
the |
T5137 |
1125-1130 |
NN |
denotes |
level |
T5138 |
1131-1133 |
IN |
denotes |
of |
T5139 |
1134-1143 |
NN |
denotes |
rhodopsin |
T5140 |
1144-1154 |
NN |
denotes |
expression |
T5141 |
1154-1155 |
. |
denotes |
. |
T5142 |
1155-1265 |
sentence |
denotes |
In addition, the timing of rhodopsin expression may be very important, as indicated by studies in Drosophila. |
T5143 |
1156-1158 |
IN |
denotes |
In |
T5144 |
1208-1210 |
VB |
denotes |
be |
T5145 |
1159-1167 |
NN |
denotes |
addition |
T5146 |
1167-1169 |
, |
denotes |
, |
T5147 |
1169-1172 |
DT |
denotes |
the |
T5148 |
1173-1179 |
NN |
denotes |
timing |
T5149 |
1180-1182 |
IN |
denotes |
of |
T5150 |
1183-1192 |
NN |
denotes |
rhodopsin |
T5151 |
1193-1203 |
NN |
denotes |
expression |
T5152 |
1204-1207 |
MD |
denotes |
may |
T5153 |
1211-1215 |
RB |
denotes |
very |
T5154 |
1216-1225 |
JJ |
denotes |
important |
T5155 |
1225-1227 |
, |
denotes |
, |
T5156 |
1227-1229 |
IN |
denotes |
as |
T5157 |
1230-1239 |
VBN |
denotes |
indicated |
T5158 |
1240-1242 |
IN |
denotes |
by |
T5159 |
1243-1250 |
NNS |
denotes |
studies |
T5160 |
1251-1253 |
IN |
denotes |
in |
T5161 |
1254-1264 |
NNP |
denotes |
Drosophila |
T5162 |
1264-1265 |
. |
denotes |
. |
R2723 |
T4911 |
T4912 |
prep |
In,occurs |
R2724 |
T4913 |
T4914 |
amod |
developing,photoreceptors |
R2725 |
T4914 |
T4911 |
pobj |
photoreceptors,In |
R2726 |
T4915 |
T4912 |
punct |
", ",occurs |
R2727 |
T4916 |
T4917 |
det |
an,process |
R2728 |
T4917 |
T4912 |
nsubj |
process,occurs |
R2729 |
T4918 |
T4917 |
amod |
extraordinary,process |
R2730 |
T4919 |
T4917 |
compound |
growth,process |
R2731 |
T4920 |
T4921 |
advmod |
whereby,generated |
R2732 |
T4921 |
T4912 |
ccomp |
generated,occurs |
R2733 |
T4922 |
T4923 |
det |
the,segment |
R2734 |
T4923 |
T4921 |
nsubjpass |
segment,generated |
R2735 |
T4924 |
T4923 |
amod |
outer,segment |
R2736 |
T4925 |
T4921 |
auxpass |
is,generated |
R2737 |
T4926 |
T4921 |
prep |
from,generated |
R2738 |
T4927 |
T4928 |
det |
the,cilium |
R2739 |
T4928 |
T4926 |
pobj |
cilium,from |
R2740 |
T4929 |
T4928 |
amod |
nascent,cilium |
R2741 |
T4930 |
T4928 |
amod |
connecting,cilium |
R2742 |
T4931 |
T4932 |
punct |
(,see |
R2743 |
T4932 |
T4912 |
parataxis |
see,occurs |
R2744 |
T4933 |
T4934 |
punct |
[,38 |
R2745 |
T4934 |
T4932 |
dobj |
38,see |
R2746 |
T4935 |
T4934 |
punct |
],38 |
R2747 |
T4936 |
T4934 |
cc |
and,38 |
R2748 |
T4937 |
T4934 |
conj |
references,38 |
R2749 |
T4938 |
T4937 |
advmod |
therein,references |
R2750 |
T4939 |
T4932 |
punct |
),see |
R2751 |
T4940 |
T4912 |
punct |
.,occurs |
R2752 |
T4942 |
T4943 |
nmod |
Peripherin,RDS |
R2753 |
T4943 |
T4945 |
nmod |
RDS,proteins |
R2754 |
T4944 |
T4943 |
punct |
/,RDS |
R2755 |
T4945 |
T4950 |
nsubj |
proteins,have |
R2756 |
T4946 |
T4943 |
cc |
and,RDS |
R2757 |
T4947 |
T4943 |
conj |
ROM,RDS |
R2758 |
T4948 |
T4947 |
punct |
-,ROM |
R2759 |
T4949 |
T4947 |
nummod |
1,ROM |
R2760 |
T4951 |
T4945 |
punct |
(,proteins |
R2761 |
T4952 |
T4945 |
acl |
localized,proteins |
R2762 |
T4953 |
T4952 |
prep |
in,localized |
R2763 |
T4954 |
T4955 |
compound |
disc,rims |
R2764 |
T4955 |
T4953 |
pobj |
rims,in |
R2765 |
T4956 |
T4945 |
punct |
),proteins |
R2766 |
T4957 |
T4945 |
cc |
and,proteins |
R2767 |
T4958 |
T4959 |
det |
the,proteins |
R2768 |
T4959 |
T4945 |
conj |
proteins,proteins |
R2769 |
T4960 |
T4959 |
compound |
opsin,proteins |
R2770 |
T4961 |
T4959 |
punct |
(,proteins |
R2771 |
T4962 |
T4959 |
acl |
localized,proteins |
R2772 |
T4963 |
T4962 |
prep |
throughout,localized |
R2773 |
T4964 |
T4965 |
det |
the,discs |
R2774 |
T4965 |
T4963 |
pobj |
discs,throughout |
R2775 |
T4966 |
T4950 |
punct |
),have |
R2776 |
T4967 |
T4968 |
amod |
important,roles |
R2777 |
T4968 |
T4950 |
dobj |
roles,have |
R2778 |
T4969 |
T4968 |
prep |
in,roles |
R2779 |
T4970 |
T4971 |
det |
the,integrity |
R2780 |
T4971 |
T4969 |
pobj |
integrity,in |
R2781 |
T4972 |
T4971 |
amod |
structural,integrity |
R2782 |
T4973 |
T4971 |
prep |
of,integrity |
R2783 |
T4974 |
T4975 |
amod |
mature,segments |
R2784 |
T4975 |
T4973 |
pobj |
segments,of |
R2785 |
T4976 |
T4975 |
amod |
outer,segments |
R2786 |
T4977 |
T4978 |
punct |
(,see |
R2787 |
T4978 |
T4950 |
parataxis |
see,have |
R2788 |
T4979 |
T4978 |
punct |
[,see |
R2789 |
T4980 |
T4981 |
nummod |
39,29 |
R2790 |
T4981 |
T4978 |
dobj |
29,see |
R2791 |
T4982 |
T4981 |
punct |
",",29 |
R2792 |
T4983 |
T4978 |
punct |
],see |
R2793 |
T4984 |
T4978 |
punct |
),see |
R2794 |
T4985 |
T4950 |
punct |
.,have |
R2795 |
T4987 |
T4988 |
nmod |
ROM,mice |
R2796 |
T4988 |
T4994 |
nsubj |
mice,produce |
R2797 |
T4989 |
T4987 |
punct |
-,ROM |
R2798 |
T4990 |
T4987 |
nummod |
1,ROM |
R2799 |
T4991 |
T4987 |
punct |
-,ROM |
R2800 |
T4992 |
T4987 |
punct |
/,ROM |
R2801 |
T4993 |
T4987 |
punct |
-,ROM |
R2802 |
T4995 |
T4996 |
amod |
disorganized,segments |
R2803 |
T4996 |
T4994 |
dobj |
segments,produce |
R2804 |
T4997 |
T4996 |
amod |
outer,segments |
R2805 |
T4998 |
T4996 |
prep |
with,segments |
R2806 |
T4999 |
T5000 |
amod |
large,disks |
R2807 |
T5000 |
T4998 |
pobj |
disks,with |
R2808 |
T5001 |
T5002 |
punct |
[,40 |
R2809 |
T5002 |
T4994 |
parataxis |
40,produce |
R2810 |
T5003 |
T5002 |
punct |
],40 |
R2811 |
T5004 |
T4994 |
punct |
.,produce |
R2812 |
T5006 |
T5007 |
nsubj |
Crx,controls |
R2813 |
T5008 |
T5007 |
punct |
", ",controls |
R2814 |
T5009 |
T5007 |
prep |
by,controls |
R2815 |
T5010 |
T5009 |
pobj |
virtue,by |
R2816 |
T5011 |
T5010 |
prep |
of,virtue |
R2817 |
T5012 |
T5011 |
pcomp |
being,of |
R2818 |
T5013 |
T5014 |
det |
a,factor |
R2819 |
T5014 |
T5012 |
attr |
factor,being |
R2820 |
T5015 |
T5014 |
compound |
transcription,factor |
R2821 |
T5016 |
T5007 |
punct |
", ",controls |
R2822 |
T5017 |
T5007 |
advmod |
presumably,controls |
R2823 |
T5018 |
T5007 |
dobj |
genes,controls |
R2824 |
T5019 |
T5020 |
dep |
that,are |
R2825 |
T5020 |
T5018 |
relcl |
are,genes |
R2826 |
T5021 |
T5020 |
acomp |
responsible,are |
R2827 |
T5022 |
T5021 |
prep |
for,responsible |
R2828 |
T5023 |
T5024 |
det |
the,building |
R2829 |
T5024 |
T5022 |
pobj |
building,for |
R2830 |
T5025 |
T5024 |
cc |
and,building |
R2831 |
T5026 |
T5027 |
advmod |
perhaps,maintenance |
R2832 |
T5027 |
T5024 |
conj |
maintenance,building |
R2833 |
T5028 |
T5024 |
prep |
of,building |
R2834 |
T5029 |
T5030 |
det |
the,structure |
R2835 |
T5030 |
T5028 |
pobj |
structure,of |
R2836 |
T5031 |
T5032 |
amod |
outer,segment |
R2837 |
T5032 |
T5030 |
compound |
segment,structure |
R2838 |
T5033 |
T5018 |
punct |
", ",genes |
R2839 |
T5034 |
T5018 |
prep |
including,genes |
R2840 |
T5035 |
T5034 |
pobj |
rhodopsin,including |
R2841 |
T5036 |
T5035 |
cc |
and,rhodopsin |
R2842 |
T5037 |
T5035 |
conj |
peripherin,rhodopsin |
R2843 |
T5038 |
T5007 |
punct |
.,controls |
R2844 |
T5040 |
T5041 |
advcl |
Using,defined |
R2845 |
T5042 |
T5043 |
compound |
northern,blots |
R2846 |
T5043 |
T5040 |
dobj |
blots,Using |
R2847 |
T5044 |
T5045 |
punct |
[,34 |
R2848 |
T5045 |
T5043 |
parataxis |
34,blots |
R2849 |
T5046 |
T5045 |
punct |
],34 |
R2850 |
T5047 |
T5043 |
punct |
", ",blots |
R2851 |
T5048 |
T5043 |
conj |
microarrays,blots |
R2852 |
T5049 |
T5050 |
punct |
[,10 |
R2853 |
T5050 |
T5048 |
parataxis |
10,microarrays |
R2854 |
T5051 |
T5050 |
punct |
],10 |
R2855 |
T5052 |
T5048 |
punct |
", ",microarrays |
R2856 |
T5053 |
T5048 |
cc |
and,microarrays |
R2857 |
T5054 |
T5055 |
amod |
serial,analysis |
R2858 |
T5055 |
T5048 |
conj |
analysis,microarrays |
R2859 |
T5056 |
T5055 |
prep |
of,analysis |
R2860 |
T5057 |
T5058 |
compound |
gene,expression |
R2861 |
T5058 |
T5056 |
pobj |
expression,of |
R2862 |
T5059 |
T5055 |
punct |
(,analysis |
R2863 |
T5060 |
T5055 |
appos |
SAGE,analysis |
R2864 |
T5061 |
T5055 |
punct |
),analysis |
R2865 |
T5062 |
T5063 |
punct |
[,35 |
R2866 |
T5063 |
T5055 |
parataxis |
35,analysis |
R2867 |
T5064 |
T5063 |
punct |
],35 |
R2868 |
T5065 |
T5041 |
punct |
", ",defined |
R2869 |
T5066 |
T5041 |
nsubj |
we,defined |
R2870 |
T5067 |
T5041 |
aux |
have,defined |
R2871 |
T5068 |
T5069 |
det |
a,number |
R2872 |
T5069 |
T5041 |
dobj |
number,defined |
R2873 |
T5070 |
T5069 |
amod |
large,number |
R2874 |
T5071 |
T5069 |
prep |
of,number |
R2875 |
T5072 |
T5071 |
pobj |
genes,of |
R2876 |
T5073 |
T5074 |
dep |
that,altered |
R2877 |
T5074 |
T5072 |
relcl |
altered,genes |
R2878 |
T5075 |
T5074 |
auxpass |
are,altered |
R2879 |
T5076 |
T5074 |
prep |
in,altered |
R2880 |
T5077 |
T5078 |
poss |
their,level |
R2881 |
T5078 |
T5076 |
pobj |
level,in |
R2882 |
T5079 |
T5078 |
compound |
expression,level |
R2883 |
T5080 |
T5074 |
prep |
in,altered |
R2884 |
T5081 |
T5082 |
nmod |
Crx,mice |
R2885 |
T5082 |
T5080 |
pobj |
mice,in |
R2886 |
T5083 |
T5081 |
punct |
-,Crx |
R2887 |
T5084 |
T5081 |
punct |
/,Crx |
R2888 |
T5085 |
T5081 |
punct |
-,Crx |
R2889 |
T5086 |
T5041 |
punct |
.,defined |
R2890 |
T5088 |
T5089 |
nsubj |
We,found |
R2891 |
T5090 |
T5091 |
mark |
that,diminished |
R2892 |
T5091 |
T5089 |
ccomp |
diminished,found |
R2893 |
T5092 |
T5093 |
compound |
rhodopsin,expression |
R2894 |
T5093 |
T5091 |
nsubjpass |
expression,diminished |
R2895 |
T5094 |
T5091 |
auxpass |
was,diminished |
R2896 |
T5095 |
T5091 |
advmod |
severely,diminished |
R2897 |
T5096 |
T5091 |
prep |
in,diminished |
R2898 |
T5097 |
T5098 |
nmod |
Crx,animals |
R2899 |
T5098 |
T5096 |
pobj |
animals,in |
R2900 |
T5099 |
T5097 |
punct |
-,Crx |
R2901 |
T5100 |
T5097 |
punct |
/,Crx |
R2902 |
T5101 |
T5097 |
punct |
-,Crx |
R2903 |
T5102 |
T5091 |
punct |
", ",diminished |
R2904 |
T5103 |
T5091 |
cc |
and,diminished |
R2905 |
T5104 |
T5105 |
compound |
peripherin,mRNA |
R2906 |
T5105 |
T5106 |
nsubjpass |
mRNA,reduced |
R2907 |
T5106 |
T5091 |
conj |
reduced,diminished |
R2908 |
T5107 |
T5106 |
auxpass |
was,reduced |
R2909 |
T5108 |
T5106 |
prep |
by,reduced |
R2910 |
T5109 |
T5110 |
advmod |
approximately,30 |
R2911 |
T5110 |
T5111 |
nummod |
30,% |
R2912 |
T5111 |
T5108 |
pobj |
%,by |
R2913 |
T5112 |
T5089 |
punct |
.,found |
R2914 |
T5114 |
T5115 |
amod |
Transgenic,mice |
R2915 |
T5115 |
T5116 |
nsubj |
mice,exhibit |
R2916 |
T5117 |
T5115 |
prep |
with,mice |
R2917 |
T5118 |
T5119 |
amod |
variable,levels |
R2918 |
T5119 |
T5117 |
pobj |
levels,with |
R2919 |
T5120 |
T5119 |
prep |
of,levels |
R2920 |
T5121 |
T5120 |
pobj |
expression,of |
R2921 |
T5122 |
T5121 |
prep |
of,expression |
R2922 |
T5123 |
T5124 |
amod |
wild,type |
R2923 |
T5124 |
T5125 |
compound |
type,rhodopsin |
R2924 |
T5125 |
T5122 |
pobj |
rhodopsin,of |
R2925 |
T5126 |
T5127 |
compound |
rod,degeneration |
R2926 |
T5127 |
T5116 |
dobj |
degeneration,exhibit |
R2927 |
T5128 |
T5129 |
punct |
[,41 |
R2928 |
T5129 |
T5116 |
parataxis |
41,exhibit |
R2929 |
T5130 |
T5129 |
punct |
],41 |
R2930 |
T5131 |
T5116 |
punct |
", ",exhibit |
R2931 |
T5132 |
T5116 |
advcl |
indicating,exhibit |
R2932 |
T5133 |
T5134 |
det |
the,importance |
R2933 |
T5134 |
T5132 |
dobj |
importance,indicating |
R2934 |
T5135 |
T5134 |
prep |
of,importance |
R2935 |
T5136 |
T5137 |
det |
the,level |
R2936 |
T5137 |
T5135 |
pobj |
level,of |
R2937 |
T5138 |
T5137 |
prep |
of,level |
R2938 |
T5139 |
T5140 |
compound |
rhodopsin,expression |
R2939 |
T5140 |
T5138 |
pobj |
expression,of |
R2940 |
T5141 |
T5116 |
punct |
.,exhibit |
R2941 |
T5143 |
T5144 |
prep |
In,be |
R2942 |
T5145 |
T5143 |
pobj |
addition,In |
R2943 |
T5146 |
T5144 |
punct |
", ",be |
R2944 |
T5147 |
T5148 |
det |
the,timing |
R2945 |
T5148 |
T5144 |
nsubj |
timing,be |
R2946 |
T5149 |
T5148 |
prep |
of,timing |
R2947 |
T5150 |
T5151 |
compound |
rhodopsin,expression |
R2948 |
T5151 |
T5149 |
pobj |
expression,of |
R2949 |
T5152 |
T5144 |
aux |
may,be |
R2950 |
T5153 |
T5154 |
advmod |
very,important |
R2951 |
T5154 |
T5144 |
acomp |
important,be |
R2952 |
T5155 |
T5144 |
punct |
", ",be |
R2953 |
T5156 |
T5157 |
mark |
as,indicated |
R2954 |
T5157 |
T5144 |
advcl |
indicated,be |
R2955 |
T5158 |
T5157 |
agent |
by,indicated |
R2956 |
T5159 |
T5158 |
pobj |
studies,by |
R2957 |
T5160 |
T5159 |
prep |
in,studies |
R2958 |
T5161 |
T5160 |
pobj |
Drosophila,in |
R2959 |
T5162 |
T5144 |
punct |
.,be |