![Logo](/assets/logo-d3f1fdf60522f0983e71f9fcc720cb7da5b55c0b748ed5bded3d2fbf81387bf0.png)
PMC:539297 / 23305-24394
Annnotations
craft-ca-core-dev
{"project":"craft-ca-core-dev","denotations":[{"id":"T4217","span":{"begin":659,"end":668},"obj":"PR:000022190"},{"id":"T4218","span":{"begin":683,"end":696},"obj":"GO:0005739"},{"id":"T4219","span":{"begin":769,"end":775},"obj":"NCBITaxon:33208"},{"id":"T4220","span":{"begin":832,"end":841},"obj":"GO:0006914"},{"id":"T4221","span":{"begin":845,"end":854},"obj":"GO:0005764"},{"id":"T4222","span":{"begin":912,"end":920},"obj":"PR:000005591"},{"id":"T4223","span":{"begin":943,"end":956},"obj":"GO:0005739"},{"id":"T4224","span":{"begin":998,"end":1011},"obj":"GO:0005739"},{"id":"T4225","span":{"begin":1038,"end":1047},"obj":"_FRAGMENT"},{"id":"T4226","span":{"begin":1063,"end":1065},"obj":"_FRAGMENT"},{"id":"T4227","span":{"begin":1080,"end":1088},"obj":"GO:0015031"},{"id":"T4228","span":{"begin":1052,"end":1088},"obj":"GO:0034982"},{"id":"T4229","span":{"begin":1066,"end":1079},"obj":"GO:0005739"},{"id":"T4198","span":{"begin":0,"end":8},"obj":"_FRAGMENT"},{"id":"T4199","span":{"begin":33,"end":38},"obj":"GO:0007569"},{"id":"T4200","span":{"begin":20,"end":22},"obj":"UBERON:0002037"},{"id":"T4201","span":{"begin":22,"end":26},"obj":"PR:000005591"},{"id":"T4202","span":{"begin":102,"end":111},"obj":"PR:000022190"},{"id":"T4203","span":{"begin":130,"end":148},"obj":"GO:0043227"},{"id":"T4204","span":{"begin":169,"end":178},"obj":"PR:000022190"},{"id":"T4205","span":{"begin":206,"end":208},"obj":"UBERON:0002037"},{"id":"T4206","span":{"begin":208,"end":212},"obj":"PR:000005591"},{"id":"T4207","span":{"begin":258,"end":263},"obj":"GO:0007568"},{"id":"T4208","span":{"begin":279,"end":288},"obj":"GO:0005764"},{"id":"T4209","span":{"begin":293,"end":302},"obj":"GO:0005768"},{"id":"T4210","span":{"begin":342,"end":354},"obj":"GO:0005739"},{"id":"T4211","span":{"begin":437,"end":439},"obj":"UBERON:0002037"},{"id":"T4212","span":{"begin":439,"end":443},"obj":"PR:000005591"},{"id":"T4213","span":{"begin":490,"end":498},"obj":"GO:0016020"},{"id":"T4214","span":{"begin":490,"end":510},"obj":"GO:0055085"},{"id":"T4215","span":{"begin":548,"end":557},"obj":"PR:000022190"},{"id":"T4216","span":{"begin":588,"end":596},"obj":"GO:0005764"}],"relations":[{"id":"R2369","pred":"_lexicallyChainedTo","subj":"T4199","obj":"T4198"},{"id":"R2370","pred":"_lexicallyChainedTo","subj":"T4226","obj":"T4225"},{"id":"R2371","pred":"_lexicallyChainedTo","subj":"T4227","obj":"T4226"}],"text":"Aging of homozygous CbCln3Δex7/8 cells at confluency is necessary to induce significantly accumulated subunit c protein. However, membrane organelle disruptions precede subunit c accumulation in homozygous CbCln3Δex7/8 cells, since they are observed without aging at confluency. Lysosomal and endosomal size and distribution are altered, and mitochondria are abnormally elongated and functionally compromised in sub-confluent homozygous CbCln3Δex7/8 cultures. These observations argue that membrane trafficking defects do not result from excessive subunit c accumulation compromising the lysosome, but rather are early events in the disease process preceding subunit c accumulation. Mitochondrial abnormalities, which have also been reported in JNCL patients and other animal models [21-23], may result from ineffective turnover by autophagy, a lysosomal-targeted pathway [24]. Alternatively, or simultaneously, battenin deficiency may impact mitochondrial function upstream of turnover, affecting mitochondrial biogenesis and/or altered transport and processing of mitochondrial proteins."}
craft-sa-dev
{"project":"craft-sa-dev","denotations":[{"id":"T4668","span":{"begin":0,"end":5},"obj":"NN"},{"id":"T4669","span":{"begin":53,"end":55},"obj":"VBZ"},{"id":"T4670","span":{"begin":6,"end":8},"obj":"IN"},{"id":"T4671","span":{"begin":9,"end":19},"obj":"JJ"},{"id":"T4672","span":{"begin":33,"end":38},"obj":"NNS"},{"id":"T4673","span":{"begin":20,"end":30},"obj":"NN"},{"id":"T4674","span":{"begin":30,"end":31},"obj":"HYPH"},{"id":"T4675","span":{"begin":31,"end":32},"obj":"CD"},{"id":"T4676","span":{"begin":39,"end":41},"obj":"IN"},{"id":"T4677","span":{"begin":42,"end":52},"obj":"NN"},{"id":"T4678","span":{"begin":56,"end":65},"obj":"JJ"},{"id":"T4679","span":{"begin":66,"end":68},"obj":"TO"},{"id":"T4680","span":{"begin":69,"end":75},"obj":"VB"},{"id":"T4681","span":{"begin":76,"end":89},"obj":"RB"},{"id":"T4682","span":{"begin":90,"end":101},"obj":"VBN"},{"id":"T4683","span":{"begin":112,"end":119},"obj":"NN"},{"id":"T4684","span":{"begin":102,"end":109},"obj":"NN"},{"id":"T4685","span":{"begin":110,"end":111},"obj":"NN"},{"id":"T4686","span":{"begin":119,"end":120},"obj":"."},{"id":"T4687","span":{"begin":120,"end":278},"obj":"sentence"},{"id":"T4688","span":{"begin":121,"end":128},"obj":"RB"},{"id":"T4689","span":{"begin":161,"end":168},"obj":"VBP"},{"id":"T4690","span":{"begin":128,"end":130},"obj":","},{"id":"T4691","span":{"begin":130,"end":138},"obj":"NN"},{"id":"T4692","span":{"begin":139,"end":148},"obj":"NN"},{"id":"T4693","span":{"begin":149,"end":160},"obj":"NNS"},{"id":"T4694","span":{"begin":169,"end":176},"obj":"NN"},{"id":"T4695","span":{"begin":177,"end":178},"obj":"NN"},{"id":"T4696","span":{"begin":179,"end":191},"obj":"NN"},{"id":"T4697","span":{"begin":192,"end":194},"obj":"IN"},{"id":"T4698","span":{"begin":195,"end":205},"obj":"JJ"},{"id":"T4699","span":{"begin":219,"end":224},"obj":"NNS"},{"id":"T4700","span":{"begin":206,"end":216},"obj":"NN"},{"id":"T4701","span":{"begin":216,"end":217},"obj":"HYPH"},{"id":"T4702","span":{"begin":217,"end":218},"obj":"CD"},{"id":"T4703","span":{"begin":224,"end":226},"obj":","},{"id":"T4704","span":{"begin":226,"end":231},"obj":"IN"},{"id":"T4705","span":{"begin":241,"end":249},"obj":"VBN"},{"id":"T4706","span":{"begin":232,"end":236},"obj":"PRP"},{"id":"T4707","span":{"begin":237,"end":240},"obj":"VBP"},{"id":"T4708","span":{"begin":250,"end":257},"obj":"IN"},{"id":"T4709","span":{"begin":258,"end":263},"obj":"VBG"},{"id":"T4710","span":{"begin":264,"end":266},"obj":"IN"},{"id":"T4711","span":{"begin":267,"end":277},"obj":"NN"},{"id":"T4712","span":{"begin":277,"end":278},"obj":"."},{"id":"T4713","span":{"begin":278,"end":459},"obj":"sentence"},{"id":"T4714","span":{"begin":279,"end":288},"obj":"JJ"},{"id":"T4715","span":{"begin":303,"end":307},"obj":"NN"},{"id":"T4716","span":{"begin":289,"end":292},"obj":"CC"},{"id":"T4717","span":{"begin":293,"end":302},"obj":"JJ"},{"id":"T4718","span":{"begin":329,"end":336},"obj":"VBN"},{"id":"T4719","span":{"begin":308,"end":311},"obj":"CC"},{"id":"T4720","span":{"begin":312,"end":324},"obj":"NN"},{"id":"T4721","span":{"begin":325,"end":328},"obj":"VBP"},{"id":"T4722","span":{"begin":336,"end":338},"obj":","},{"id":"T4723","span":{"begin":338,"end":341},"obj":"CC"},{"id":"T4724","span":{"begin":342,"end":354},"obj":"NNS"},{"id":"T4725","span":{"begin":355,"end":358},"obj":"VBP"},{"id":"T4726","span":{"begin":359,"end":369},"obj":"RB"},{"id":"T4727","span":{"begin":370,"end":379},"obj":"VBN"},{"id":"T4728","span":{"begin":380,"end":383},"obj":"CC"},{"id":"T4729","span":{"begin":384,"end":396},"obj":"RB"},{"id":"T4730","span":{"begin":397,"end":408},"obj":"VBN"},{"id":"T4731","span":{"begin":409,"end":411},"obj":"IN"},{"id":"T4732","span":{"begin":412,"end":425},"obj":"JJ"},{"id":"T4733","span":{"begin":450,"end":458},"obj":"NNS"},{"id":"T4734","span":{"begin":426,"end":436},"obj":"JJ"},{"id":"T4735","span":{"begin":437,"end":447},"obj":"NN"},{"id":"T4736","span":{"begin":447,"end":448},"obj":"HYPH"},{"id":"T4737","span":{"begin":448,"end":449},"obj":"CD"},{"id":"T4738","span":{"begin":458,"end":459},"obj":"."},{"id":"T4739","span":{"begin":459,"end":682},"obj":"sentence"},{"id":"T4740","span":{"begin":460,"end":465},"obj":"DT"},{"id":"T4741","span":{"begin":466,"end":478},"obj":"NNS"},{"id":"T4742","span":{"begin":479,"end":484},"obj":"VBP"},{"id":"T4743","span":{"begin":485,"end":489},"obj":"IN"},{"id":"T4744","span":{"begin":526,"end":532},"obj":"VB"},{"id":"T4745","span":{"begin":490,"end":498},"obj":"NN"},{"id":"T4746","span":{"begin":499,"end":510},"obj":"NN"},{"id":"T4747","span":{"begin":511,"end":518},"obj":"NNS"},{"id":"T4748","span":{"begin":519,"end":521},"obj":"VBP"},{"id":"T4749","span":{"begin":522,"end":525},"obj":"RB"},{"id":"T4750","span":{"begin":533,"end":537},"obj":"IN"},{"id":"T4751","span":{"begin":538,"end":547},"obj":"JJ"},{"id":"T4752","span":{"begin":558,"end":570},"obj":"NN"},{"id":"T4753","span":{"begin":548,"end":555},"obj":"NN"},{"id":"T4754","span":{"begin":556,"end":557},"obj":"NN"},{"id":"T4755","span":{"begin":571,"end":583},"obj":"VBG"},{"id":"T4756","span":{"begin":584,"end":587},"obj":"DT"},{"id":"T4757","span":{"begin":588,"end":596},"obj":"NN"},{"id":"T4758","span":{"begin":596,"end":598},"obj":","},{"id":"T4759","span":{"begin":598,"end":601},"obj":"CC"},{"id":"T4760","span":{"begin":602,"end":608},"obj":"RB"},{"id":"T4761","span":{"begin":609,"end":612},"obj":"VBP"},{"id":"T4762","span":{"begin":613,"end":618},"obj":"JJ"},{"id":"T4763","span":{"begin":619,"end":625},"obj":"NNS"},{"id":"T4764","span":{"begin":626,"end":628},"obj":"IN"},{"id":"T4765","span":{"begin":629,"end":632},"obj":"DT"},{"id":"T4766","span":{"begin":641,"end":648},"obj":"NN"},{"id":"T4767","span":{"begin":633,"end":640},"obj":"NN"},{"id":"T4768","span":{"begin":649,"end":658},"obj":"VBG"},{"id":"T4769","span":{"begin":659,"end":666},"obj":"NN"},{"id":"T4770","span":{"begin":667,"end":668},"obj":"NN"},{"id":"T4771","span":{"begin":669,"end":681},"obj":"NN"},{"id":"T4772","span":{"begin":681,"end":682},"obj":"."},{"id":"T4773","span":{"begin":682,"end":877},"obj":"sentence"},{"id":"T4774","span":{"begin":683,"end":696},"obj":"JJ"},{"id":"T4775","span":{"begin":697,"end":710},"obj":"NNS"},{"id":"T4776","span":{"begin":796,"end":802},"obj":"VB"},{"id":"T4777","span":{"begin":710,"end":712},"obj":","},{"id":"T4778","span":{"begin":712,"end":717},"obj":"WDT"},{"id":"T4779","span":{"begin":733,"end":741},"obj":"VBN"},{"id":"T4780","span":{"begin":718,"end":722},"obj":"VBP"},{"id":"T4781","span":{"begin":723,"end":727},"obj":"RB"},{"id":"T4782","span":{"begin":728,"end":732},"obj":"VBN"},{"id":"T4783","span":{"begin":742,"end":744},"obj":"IN"},{"id":"T4784","span":{"begin":745,"end":749},"obj":"NN"},{"id":"T4785","span":{"begin":750,"end":758},"obj":"NNS"},{"id":"T4786","span":{"begin":759,"end":762},"obj":"CC"},{"id":"T4787","span":{"begin":763,"end":768},"obj":"JJ"},{"id":"T4788","span":{"begin":776,"end":782},"obj":"NNS"},{"id":"T4789","span":{"begin":769,"end":775},"obj":"NN"},{"id":"T4790","span":{"begin":783,"end":784},"obj":"-LRB-"},{"id":"T4791","span":{"begin":784,"end":786},"obj":"CD"},{"id":"T4792","span":{"begin":786,"end":787},"obj":"SYM"},{"id":"T4793","span":{"begin":787,"end":789},"obj":"CD"},{"id":"T4794","span":{"begin":789,"end":790},"obj":"-RRB-"},{"id":"T4795","span":{"begin":790,"end":792},"obj":","},{"id":"T4796","span":{"begin":792,"end":795},"obj":"MD"},{"id":"T4797","span":{"begin":803,"end":807},"obj":"IN"},{"id":"T4798","span":{"begin":808,"end":819},"obj":"JJ"},{"id":"T4799","span":{"begin":820,"end":828},"obj":"NN"},{"id":"T4800","span":{"begin":829,"end":831},"obj":"IN"},{"id":"T4801","span":{"begin":832,"end":841},"obj":"NN"},{"id":"T4802","span":{"begin":841,"end":843},"obj":","},{"id":"T4803","span":{"begin":843,"end":844},"obj":"DT"},{"id":"T4804","span":{"begin":864,"end":871},"obj":"NN"},{"id":"T4805","span":{"begin":845,"end":854},"obj":"JJ"},{"id":"T4806","span":{"begin":855,"end":863},"obj":"VBN"},{"id":"T4807","span":{"begin":854,"end":855},"obj":"HYPH"},{"id":"T4808","span":{"begin":872,"end":873},"obj":"-LRB-"},{"id":"T4809","span":{"begin":873,"end":875},"obj":"CD"},{"id":"T4810","span":{"begin":875,"end":876},"obj":"-RRB-"},{"id":"T4811","span":{"begin":876,"end":877},"obj":"."},{"id":"T4812","span":{"begin":877,"end":1089},"obj":"sentence"},{"id":"T4813","span":{"begin":878,"end":891},"obj":"RB"},{"id":"T4814","span":{"begin":936,"end":942},"obj":"VB"},{"id":"T4815","span":{"begin":891,"end":893},"obj":","},{"id":"T4816","span":{"begin":893,"end":895},"obj":"CC"},{"id":"T4817","span":{"begin":896,"end":910},"obj":"RB"},{"id":"T4818","span":{"begin":910,"end":912},"obj":","},{"id":"T4819","span":{"begin":912,"end":920},"obj":"NN"},{"id":"T4820","span":{"begin":921,"end":931},"obj":"NN"},{"id":"T4821","span":{"begin":932,"end":935},"obj":"MD"},{"id":"T4822","span":{"begin":943,"end":956},"obj":"JJ"},{"id":"T4823","span":{"begin":957,"end":965},"obj":"NN"},{"id":"T4824","span":{"begin":966,"end":974},"obj":"RB"},{"id":"T4825","span":{"begin":975,"end":977},"obj":"IN"},{"id":"T4826","span":{"begin":978,"end":986},"obj":"NN"},{"id":"T4827","span":{"begin":986,"end":988},"obj":","},{"id":"T4828","span":{"begin":988,"end":997},"obj":"VBG"},{"id":"T4829","span":{"begin":998,"end":1011},"obj":"JJ"},{"id":"T4830","span":{"begin":1012,"end":1022},"obj":"NN"},{"id":"T4831","span":{"begin":1023,"end":1026},"obj":"CC"},{"id":"T4832","span":{"begin":1026,"end":1027},"obj":"HYPH"},{"id":"T4833","span":{"begin":1027,"end":1029},"obj":"CC"},{"id":"T4834","span":{"begin":1030,"end":1037},"obj":"VBN"},{"id":"T4835","span":{"begin":1038,"end":1047},"obj":"NN"},{"id":"T4836","span":{"begin":1048,"end":1051},"obj":"CC"},{"id":"T4837","span":{"begin":1052,"end":1062},"obj":"NN"},{"id":"T4838","span":{"begin":1063,"end":1065},"obj":"IN"},{"id":"T4839","span":{"begin":1066,"end":1079},"obj":"JJ"},{"id":"T4840","span":{"begin":1080,"end":1088},"obj":"NN"},{"id":"T4841","span":{"begin":1088,"end":1089},"obj":"."}],"relations":[{"id":"R2617","pred":"nsubj","subj":"T4668","obj":"T4669"},{"id":"R2618","pred":"prep","subj":"T4670","obj":"T4668"},{"id":"R2619","pred":"amod","subj":"T4671","obj":"T4672"},{"id":"R2620","pred":"pobj","subj":"T4672","obj":"T4670"},{"id":"R2621","pred":"nmod","subj":"T4673","obj":"T4672"},{"id":"R2622","pred":"punct","subj":"T4674","obj":"T4673"},{"id":"R2623","pred":"nummod","subj":"T4675","obj":"T4673"},{"id":"R2624","pred":"prep","subj":"T4676","obj":"T4668"},{"id":"R2625","pred":"pobj","subj":"T4677","obj":"T4676"},{"id":"R2626","pred":"acomp","subj":"T4678","obj":"T4669"},{"id":"R2627","pred":"aux","subj":"T4679","obj":"T4680"},{"id":"R2628","pred":"xcomp","subj":"T4680","obj":"T4678"},{"id":"R2629","pred":"advmod","subj":"T4681","obj":"T4682"},{"id":"R2630","pred":"amod","subj":"T4682","obj":"T4683"},{"id":"R2631","pred":"dobj","subj":"T4683","obj":"T4680"},{"id":"R2632","pred":"compound","subj":"T4684","obj":"T4685"},{"id":"R2633","pred":"compound","subj":"T4685","obj":"T4683"},{"id":"R2634","pred":"punct","subj":"T4686","obj":"T4669"},{"id":"R2635","pred":"advmod","subj":"T4688","obj":"T4689"},{"id":"R2636","pred":"punct","subj":"T4690","obj":"T4689"},{"id":"R2637","pred":"compound","subj":"T4691","obj":"T4692"},{"id":"R2638","pred":"compound","subj":"T4692","obj":"T4693"},{"id":"R2639","pred":"nsubj","subj":"T4693","obj":"T4689"},{"id":"R2640","pred":"compound","subj":"T4694","obj":"T4695"},{"id":"R2641","pred":"compound","subj":"T4695","obj":"T4696"},{"id":"R2642","pred":"dobj","subj":"T4696","obj":"T4689"},{"id":"R2643","pred":"prep","subj":"T4697","obj":"T4689"},{"id":"R2644","pred":"amod","subj":"T4698","obj":"T4699"},{"id":"R2645","pred":"pobj","subj":"T4699","obj":"T4697"},{"id":"R2646","pred":"nmod","subj":"T4700","obj":"T4699"},{"id":"R2647","pred":"punct","subj":"T4701","obj":"T4700"},{"id":"R2648","pred":"nummod","subj":"T4702","obj":"T4700"},{"id":"R2649","pred":"punct","subj":"T4703","obj":"T4689"},{"id":"R2650","pred":"mark","subj":"T4704","obj":"T4705"},{"id":"R2651","pred":"advcl","subj":"T4705","obj":"T4689"},{"id":"R2652","pred":"nsubjpass","subj":"T4706","obj":"T4705"},{"id":"R2653","pred":"auxpass","subj":"T4707","obj":"T4705"},{"id":"R2654","pred":"prep","subj":"T4708","obj":"T4705"},{"id":"R2655","pred":"pobj","subj":"T4709","obj":"T4708"},{"id":"R2656","pred":"prep","subj":"T4710","obj":"T4705"},{"id":"R2657","pred":"pobj","subj":"T4711","obj":"T4710"},{"id":"R2658","pred":"punct","subj":"T4712","obj":"T4689"},{"id":"R2659","pred":"amod","subj":"T4714","obj":"T4715"},{"id":"R2660","pred":"nsubjpass","subj":"T4715","obj":"T4718"},{"id":"R2661","pred":"cc","subj":"T4716","obj":"T4714"},{"id":"R2662","pred":"conj","subj":"T4717","obj":"T4714"},{"id":"R2663","pred":"cc","subj":"T4719","obj":"T4715"},{"id":"R2664","pred":"conj","subj":"T4720","obj":"T4715"},{"id":"R2665","pred":"auxpass","subj":"T4721","obj":"T4718"},{"id":"R2666","pred":"punct","subj":"T4722","obj":"T4718"},{"id":"R2667","pred":"cc","subj":"T4723","obj":"T4718"},{"id":"R2668","pred":"nsubj","subj":"T4724","obj":"T4725"},{"id":"R2669","pred":"conj","subj":"T4725","obj":"T4718"},{"id":"R2670","pred":"advmod","subj":"T4726","obj":"T4727"},{"id":"R2671","pred":"acomp","subj":"T4727","obj":"T4725"},{"id":"R2672","pred":"cc","subj":"T4728","obj":"T4727"},{"id":"R2673","pred":"advmod","subj":"T4729","obj":"T4730"},{"id":"R2674","pred":"conj","subj":"T4730","obj":"T4727"},{"id":"R2675","pred":"prep","subj":"T4731","obj":"T4725"},{"id":"R2676","pred":"amod","subj":"T4732","obj":"T4733"},{"id":"R2677","pred":"pobj","subj":"T4733","obj":"T4731"},{"id":"R2678","pred":"amod","subj":"T4734","obj":"T4733"},{"id":"R2679","pred":"nmod","subj":"T4735","obj":"T4733"},{"id":"R2680","pred":"punct","subj":"T4736","obj":"T4735"},{"id":"R2681","pred":"nummod","subj":"T4737","obj":"T4735"},{"id":"R2682","pred":"punct","subj":"T4738","obj":"T4725"},{"id":"R2683","pred":"det","subj":"T4740","obj":"T4741"},{"id":"R2684","pred":"nsubj","subj":"T4741","obj":"T4742"},{"id":"R2685","pred":"mark","subj":"T4743","obj":"T4744"},{"id":"R2686","pred":"ccomp","subj":"T4744","obj":"T4742"},{"id":"R2687","pred":"compound","subj":"T4745","obj":"T4746"},{"id":"R2688","pred":"compound","subj":"T4746","obj":"T4747"},{"id":"R2689","pred":"nsubj","subj":"T4747","obj":"T4744"},{"id":"R2690","pred":"aux","subj":"T4748","obj":"T4744"},{"id":"R2691","pred":"neg","subj":"T4749","obj":"T4744"},{"id":"R2692","pred":"prep","subj":"T4750","obj":"T4744"},{"id":"R2693","pred":"amod","subj":"T4751","obj":"T4752"},{"id":"R2694","pred":"nsubj","subj":"T4752","obj":"T4755"},{"id":"R2695","pred":"compound","subj":"T4753","obj":"T4754"},{"id":"R2696","pred":"compound","subj":"T4754","obj":"T4752"},{"id":"R2697","pred":"pcomp","subj":"T4755","obj":"T4750"},{"id":"R2698","pred":"det","subj":"T4756","obj":"T4757"},{"id":"R2699","pred":"dobj","subj":"T4757","obj":"T4755"},{"id":"R2700","pred":"punct","subj":"T4758","obj":"T4744"},{"id":"R2701","pred":"cc","subj":"T4759","obj":"T4744"},{"id":"R2702","pred":"advmod","subj":"T4760","obj":"T4759"},{"id":"R2703","pred":"conj","subj":"T4761","obj":"T4744"},{"id":"R2704","pred":"amod","subj":"T4762","obj":"T4763"},{"id":"R2705","pred":"attr","subj":"T4763","obj":"T4761"},{"id":"R2706","pred":"prep","subj":"T4764","obj":"T4763"},{"id":"R2707","pred":"det","subj":"T4765","obj":"T4766"},{"id":"R2708","pred":"pobj","subj":"T4766","obj":"T4764"},{"id":"R2709","pred":"compound","subj":"T4767","obj":"T4766"},{"id":"R2710","pred":"acl","subj":"T4768","obj":"T4763"},{"id":"R2711","pred":"compound","subj":"T4769","obj":"T4770"},{"id":"R2712","pred":"compound","subj":"T4770","obj":"T4771"},{"id":"R2713","pred":"dobj","subj":"T4771","obj":"T4768"},{"id":"R2714","pred":"punct","subj":"T4772","obj":"T4742"},{"id":"R2715","pred":"amod","subj":"T4774","obj":"T4775"},{"id":"R2716","pred":"nsubj","subj":"T4775","obj":"T4776"},{"id":"R2717","pred":"punct","subj":"T4777","obj":"T4775"},{"id":"R2718","pred":"dep","subj":"T4778","obj":"T4779"},{"id":"R2719","pred":"relcl","subj":"T4779","obj":"T4775"},{"id":"R2720","pred":"aux","subj":"T4780","obj":"T4779"},{"id":"R2721","pred":"advmod","subj":"T4781","obj":"T4779"},{"id":"R2722","pred":"auxpass","subj":"T4782","obj":"T4779"},{"id":"R2723","pred":"prep","subj":"T4783","obj":"T4779"},{"id":"R2724","pred":"compound","subj":"T4784","obj":"T4785"},{"id":"R2725","pred":"pobj","subj":"T4785","obj":"T4783"},{"id":"R2726","pred":"cc","subj":"T4786","obj":"T4785"},{"id":"R2727","pred":"amod","subj":"T4787","obj":"T4788"},{"id":"R2728","pred":"conj","subj":"T4788","obj":"T4785"},{"id":"R2729","pred":"compound","subj":"T4789","obj":"T4788"},{"id":"R2730","pred":"punct","subj":"T4790","obj":"T4791"},{"id":"R2731","pred":"parataxis","subj":"T4791","obj":"T4779"},{"id":"R2732","pred":"punct","subj":"T4792","obj":"T4793"},{"id":"R2733","pred":"prep","subj":"T4793","obj":"T4791"},{"id":"R2734","pred":"punct","subj":"T4794","obj":"T4791"},{"id":"R2735","pred":"punct","subj":"T4795","obj":"T4776"},{"id":"R2736","pred":"aux","subj":"T4796","obj":"T4776"},{"id":"R2737","pred":"prep","subj":"T4797","obj":"T4776"},{"id":"R2738","pred":"amod","subj":"T4798","obj":"T4799"},{"id":"R2739","pred":"pobj","subj":"T4799","obj":"T4797"},{"id":"R2740","pred":"prep","subj":"T4800","obj":"T4799"},{"id":"R2741","pred":"pobj","subj":"T4801","obj":"T4800"},{"id":"R2742","pred":"punct","subj":"T4802","obj":"T4801"},{"id":"R2743","pred":"det","subj":"T4803","obj":"T4804"},{"id":"R2744","pred":"appos","subj":"T4804","obj":"T4801"},{"id":"R2745","pred":"amod","subj":"T4805","obj":"T4806"},{"id":"R2746","pred":"amod","subj":"T4806","obj":"T4804"},{"id":"R2747","pred":"punct","subj":"T4807","obj":"T4806"},{"id":"R2748","pred":"punct","subj":"T4808","obj":"T4809"},{"id":"R2749","pred":"parataxis","subj":"T4809","obj":"T4776"},{"id":"R2750","pred":"punct","subj":"T4810","obj":"T4809"},{"id":"R2751","pred":"punct","subj":"T4811","obj":"T4776"},{"id":"R2752","pred":"advmod","subj":"T4813","obj":"T4814"},{"id":"R2753","pred":"punct","subj":"T4815","obj":"T4813"},{"id":"R2754","pred":"cc","subj":"T4816","obj":"T4813"},{"id":"R2755","pred":"conj","subj":"T4817","obj":"T4813"},{"id":"R2756","pred":"punct","subj":"T4818","obj":"T4814"},{"id":"R2757","pred":"compound","subj":"T4819","obj":"T4820"},{"id":"R2758","pred":"nsubj","subj":"T4820","obj":"T4814"},{"id":"R2759","pred":"aux","subj":"T4821","obj":"T4814"},{"id":"R2760","pred":"amod","subj":"T4822","obj":"T4823"},{"id":"R2761","pred":"dobj","subj":"T4823","obj":"T4814"},{"id":"R2762","pred":"advmod","subj":"T4824","obj":"T4823"},{"id":"R2763","pred":"prep","subj":"T4825","obj":"T4824"},{"id":"R2764","pred":"pobj","subj":"T4826","obj":"T4825"},{"id":"R2765","pred":"punct","subj":"T4827","obj":"T4814"},{"id":"R2766","pred":"advcl","subj":"T4828","obj":"T4814"},{"id":"R2767","pred":"amod","subj":"T4829","obj":"T4830"},{"id":"R2768","pred":"dobj","subj":"T4830","obj":"T4828"},{"id":"R2769","pred":"cc","subj":"T4831","obj":"T4830"},{"id":"R2770","pred":"punct","subj":"T4832","obj":"T4831"},{"id":"R2771","pred":"cc","subj":"T4833","obj":"T4831"},{"id":"R2772","pred":"amod","subj":"T4834","obj":"T4835"},{"id":"R2773","pred":"conj","subj":"T4835","obj":"T4830"},{"id":"R2774","pred":"cc","subj":"T4836","obj":"T4835"},{"id":"R2775","pred":"conj","subj":"T4837","obj":"T4835"},{"id":"R2776","pred":"prep","subj":"T4838","obj":"T4835"},{"id":"R2777","pred":"amod","subj":"T4839","obj":"T4840"},{"id":"R2778","pred":"pobj","subj":"T4840","obj":"T4838"},{"id":"R2779","pred":"punct","subj":"T4841","obj":"T4814"}],"text":"Aging of homozygous CbCln3Δex7/8 cells at confluency is necessary to induce significantly accumulated subunit c protein. However, membrane organelle disruptions precede subunit c accumulation in homozygous CbCln3Δex7/8 cells, since they are observed without aging at confluency. Lysosomal and endosomal size and distribution are altered, and mitochondria are abnormally elongated and functionally compromised in sub-confluent homozygous CbCln3Δex7/8 cultures. These observations argue that membrane trafficking defects do not result from excessive subunit c accumulation compromising the lysosome, but rather are early events in the disease process preceding subunit c accumulation. Mitochondrial abnormalities, which have also been reported in JNCL patients and other animal models [21-23], may result from ineffective turnover by autophagy, a lysosomal-targeted pathway [24]. Alternatively, or simultaneously, battenin deficiency may impact mitochondrial function upstream of turnover, affecting mitochondrial biogenesis and/or altered transport and processing of mitochondrial proteins."}
craft-ca-core-ex-dev
{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T4327","span":{"begin":0,"end":8},"obj":"_FRAGMENT"},{"id":"T4328","span":{"begin":33,"end":38},"obj":"GO:0007569"},{"id":"T4329","span":{"begin":20,"end":22},"obj":"UBERON:0002037"},{"id":"T4330","span":{"begin":22,"end":26},"obj":"PR_EXT:000005591"},{"id":"T4331","span":{"begin":33,"end":38},"obj":"CL_GO_EXT:cell"},{"id":"T4332","span":{"begin":102,"end":111},"obj":"PR_EXT:000022190"},{"id":"T4333","span":{"begin":112,"end":119},"obj":"CHEBI_PR_EXT:protein"},{"id":"T4334","span":{"begin":130,"end":148},"obj":"GO:0043227"},{"id":"T4335","span":{"begin":169,"end":178},"obj":"PR_EXT:000022190"},{"id":"T4336","span":{"begin":206,"end":208},"obj":"UBERON:0002037"},{"id":"T4337","span":{"begin":208,"end":212},"obj":"PR_EXT:000005591"},{"id":"T4338","span":{"begin":219,"end":224},"obj":"CL_GO_EXT:cell"},{"id":"T4339","span":{"begin":258,"end":263},"obj":"GO:0007568"},{"id":"T4340","span":{"begin":279,"end":288},"obj":"GO:0005764"},{"id":"T4341","span":{"begin":293,"end":302},"obj":"GO:0005768"},{"id":"T4342","span":{"begin":342,"end":354},"obj":"GO:0005739"},{"id":"T4343","span":{"begin":437,"end":439},"obj":"UBERON:0002037"},{"id":"T4344","span":{"begin":439,"end":443},"obj":"PR_EXT:000005591"},{"id":"T4345","span":{"begin":490,"end":498},"obj":"GO:0016020"},{"id":"T4346","span":{"begin":490,"end":510},"obj":"GO:0055085"},{"id":"T4347","span":{"begin":548,"end":557},"obj":"PR_EXT:000022190"},{"id":"T4348","span":{"begin":588,"end":596},"obj":"GO:0005764"},{"id":"T4349","span":{"begin":659,"end":668},"obj":"PR_EXT:000022190"},{"id":"T4350","span":{"begin":683,"end":696},"obj":"GO:0005739"},{"id":"T4351","span":{"begin":769,"end":775},"obj":"NCBITaxon:33208"},{"id":"T4352","span":{"begin":832,"end":841},"obj":"GO:0006914"},{"id":"T4353","span":{"begin":845,"end":854},"obj":"GO:0005764"},{"id":"T4354","span":{"begin":912,"end":920},"obj":"PR_EXT:000005591"},{"id":"T4355","span":{"begin":943,"end":956},"obj":"GO:0005739"},{"id":"T4356","span":{"begin":998,"end":1011},"obj":"GO:0005739"},{"id":"T4357","span":{"begin":1012,"end":1022},"obj":"GO_EXT:biogenesis_or_biosynthesis"},{"id":"T4358","span":{"begin":1038,"end":1047},"obj":"_FRAGMENT"},{"id":"T4359","span":{"begin":1063,"end":1065},"obj":"_FRAGMENT"},{"id":"T4360","span":{"begin":1080,"end":1088},"obj":"GO:0015031"},{"id":"T4361","span":{"begin":1052,"end":1062},"obj":"SO_EXT:sequence_alteration_process"},{"id":"T4362","span":{"begin":1052,"end":1088},"obj":"GO:0034982"},{"id":"T4363","span":{"begin":1066,"end":1079},"obj":"GO:0005739"},{"id":"T4364","span":{"begin":1080,"end":1088},"obj":"CHEBI_PR_EXT:protein"}],"relations":[{"id":"R2377","pred":"_lexicallyChainedTo","subj":"T4328","obj":"T4327"},{"id":"R2378","pred":"_lexicallyChainedTo","subj":"T4359","obj":"T4358"},{"id":"R2379","pred":"_lexicallyChainedTo","subj":"T4360","obj":"T4359"}],"text":"Aging of homozygous CbCln3Δex7/8 cells at confluency is necessary to induce significantly accumulated subunit c protein. However, membrane organelle disruptions precede subunit c accumulation in homozygous CbCln3Δex7/8 cells, since they are observed without aging at confluency. Lysosomal and endosomal size and distribution are altered, and mitochondria are abnormally elongated and functionally compromised in sub-confluent homozygous CbCln3Δex7/8 cultures. These observations argue that membrane trafficking defects do not result from excessive subunit c accumulation compromising the lysosome, but rather are early events in the disease process preceding subunit c accumulation. Mitochondrial abnormalities, which have also been reported in JNCL patients and other animal models [21-23], may result from ineffective turnover by autophagy, a lysosomal-targeted pathway [24]. Alternatively, or simultaneously, battenin deficiency may impact mitochondrial function upstream of turnover, affecting mitochondrial biogenesis and/or altered transport and processing of mitochondrial proteins."}
2_test
{"project":"2_test","denotations":[{"id":"15588329-7668331-12950155","span":{"begin":784,"end":786},"obj":"7668331"},{"id":"15588329-10191128-12950155","span":{"begin":784,"end":786},"obj":"10191128"},{"id":"15588329-11588986-12950155","span":{"begin":784,"end":786},"obj":"11588986"},{"id":"15588329-11099404-12950156","span":{"begin":873,"end":875},"obj":"11099404"}],"text":"Aging of homozygous CbCln3Δex7/8 cells at confluency is necessary to induce significantly accumulated subunit c protein. However, membrane organelle disruptions precede subunit c accumulation in homozygous CbCln3Δex7/8 cells, since they are observed without aging at confluency. Lysosomal and endosomal size and distribution are altered, and mitochondria are abnormally elongated and functionally compromised in sub-confluent homozygous CbCln3Δex7/8 cultures. These observations argue that membrane trafficking defects do not result from excessive subunit c accumulation compromising the lysosome, but rather are early events in the disease process preceding subunit c accumulation. Mitochondrial abnormalities, which have also been reported in JNCL patients and other animal models [21-23], may result from ineffective turnover by autophagy, a lysosomal-targeted pathway [24]. Alternatively, or simultaneously, battenin deficiency may impact mitochondrial function upstream of turnover, affecting mitochondrial biogenesis and/or altered transport and processing of mitochondrial proteins."}