PMC:539061 / 7829-8088
Annnotations
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T728 | 56-60 | SO:0000704 | denotes | gene |
| T729 | 93-99 | PR:000000183 | denotes | TGF-β2 |
| T730 | 104-174 | PR:000000364 | denotes | small phenotype– and mothers against decapentaplegic–related protein 2 |
| T731 | 176-181 | PR:000000364 | denotes | SMAD2 |
| T732 | 218-223 | PR:000015308 | denotes | Snail |
| T733 | 224-228 | SO:0000704 | denotes | gene |
| T734 | 224-239 | GO:0010467 | denotes | gene expression |
| T735 | 243-258 | UBERON:0019204 | denotes | skin epithelium |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T994 | 35-45 | SO_EXT:transgenic_entity | denotes | transgenic |
| T995 | 47-49 | SO_EXT:transgenic_entity | denotes | Tg |
| T996 | 56-60 | SO_EXT:0000704 | denotes | gene |
| T997 | 93-99 | PR_EXT:000000183 | denotes | TGF-β2 |
| T998 | 104-174 | PR_EXT:000000364 | denotes | small phenotype– and mothers against decapentaplegic–related protein 2 |
| T999 | 165-172 | CHEBI_PR_EXT:protein | denotes | protein |
| T1000 | 176-181 | PR_EXT:000000364 | denotes | SMAD2 |
| T1001 | 183-192 | GO_EXT:cell_communication_or_signaling_or_signal_transduction | denotes | signaling |
| T1002 | 218-223 | PR_EXT:000015308 | denotes | Snail |
| T1003 | 224-228 | SO_EXT:0000704 | denotes | gene |
| T1004 | 224-239 | GO:0010467 | denotes | gene expression |
| T1005 | 243-258 | UBERON:0019204 | denotes | skin epithelium |
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2168 | 0-259 | sentence | denotes | In contrast, we provide in vitro, transgenic (Tg), and gene targeting evidence to show that TGF-β2 and small phenotype– and mothers against decapentaplegic–related protein 2 (SMAD2) signaling are upstream inducers of Snail gene expression in skin epithelium. |
| T2169 | 1-3 | IN | denotes | In |
| T2170 | 17-24 | VBP | denotes | provide |
| T2171 | 4-12 | NN | denotes | contrast |
| T2172 | 12-14 | , | denotes | , |
| T2173 | 14-16 | PRP | denotes | we |
| T2174 | 25-27 | FW | denotes | in |
| T2175 | 28-33 | FW | denotes | vitro |
| T2176 | 71-79 | NN | denotes | evidence |
| T2177 | 33-35 | , | denotes | , |
| T2178 | 35-45 | JJ | denotes | transgenic |
| T2179 | 46-47 | -LRB- | denotes | ( |
| T2180 | 47-49 | JJ | denotes | Tg |
| T2181 | 49-50 | -RRB- | denotes | ) |
| T2182 | 50-52 | , | denotes | , |
| T2183 | 52-55 | CC | denotes | and |
| T2184 | 56-60 | NN | denotes | gene |
| T2185 | 61-70 | VBG | denotes | targeting |
| T2186 | 80-82 | TO | denotes | to |
| T2187 | 83-87 | VB | denotes | show |
| T2188 | 88-92 | IN | denotes | that |
| T2189 | 193-196 | VBP | denotes | are |
| T2190 | 93-96 | NN | denotes | TGF |
| T2191 | 97-99 | NN | denotes | β2 |
| T2192 | 96-97 | HYPH | denotes | - |
| T2193 | 183-192 | NN | denotes | signaling |
| T2194 | 100-103 | CC | denotes | and |
| T2195 | 104-109 | JJ | denotes | small |
| T2196 | 110-119 | NN | denotes | phenotype |
| T2197 | 157-164 | VBN | denotes | related |
| T2198 | 119-120 | -LRB- | denotes | – |
| T2199 | 121-124 | CC | denotes | and |
| T2200 | 125-132 | NNS | denotes | mothers |
| T2201 | 133-140 | IN | denotes | against |
| T2202 | 141-156 | NN | denotes | decapentaplegic |
| T2203 | 156-157 | -RRB- | denotes | – |
| T2204 | 165-172 | NN | denotes | protein |
| T2205 | 173-174 | CD | denotes | 2 |
| T2206 | 175-176 | -LRB- | denotes | ( |
| T2207 | 176-181 | NN | denotes | SMAD2 |
| T2208 | 181-182 | -RRB- | denotes | ) |
| T2209 | 197-205 | JJ | denotes | upstream |
| T2210 | 206-214 | NNS | denotes | inducers |
| T2211 | 215-217 | IN | denotes | of |
| T2212 | 218-223 | NN | denotes | Snail |
| T2213 | 229-239 | NN | denotes | expression |
| T2214 | 224-228 | NN | denotes | gene |
| T2215 | 240-242 | IN | denotes | in |
| T2216 | 243-247 | NN | denotes | skin |
| T2217 | 248-258 | NN | denotes | epithelium |
| T2218 | 258-259 | . | denotes | . |
| R1271 | T2169 | T2170 | prep | In,provide |
| R1272 | T2171 | T2169 | pobj | contrast,In |
| R1274 | T2172 | T2170 | punct | ", ",provide |
| R1275 | T2173 | T2170 | nsubj | we,provide |
| R1276 | T2174 | T2175 | advmod | in,vitro |
| R1278 | T2175 | T2176 | amod | vitro,evidence |
| R1279 | T2176 | T2170 | dobj | evidence,provide |
| R1281 | T2177 | T2175 | punct | ", ",vitro |
| R1282 | T2178 | T2175 | conj | transgenic,vitro |
| R1283 | T2179 | T2180 | punct | (,Tg |
| R1285 | T2180 | T2178 | parataxis | Tg,transgenic |
| R1286 | T2181 | T2180 | punct | ),Tg |
| R1287 | T2182 | T2178 | punct | ", ",transgenic |
| R1289 | T2183 | T2178 | cc | and,transgenic |
| R1290 | T2184 | T2185 | npadvmod | gene,targeting |
| R1292 | T2185 | T2178 | conj | targeting,transgenic |
| R1293 | T2186 | T2187 | aux | to,show |
| R1295 | T2187 | T2170 | advcl | show,provide |
| R1296 | T2188 | T2189 | mark | that,are |
| R1299 | T2189 | T2187 | ccomp | are,show |
| R1300 | T2190 | T2191 | nmod | TGF,β2 |
| R1302 | T2191 | T2193 | nmod | β2,signaling |
| R1303 | T2192 | T2191 | punct | -,β2 |
| R1304 | T2193 | T2189 | nsubj | signaling,are |
| R1306 | T2194 | T2191 | cc | and,β2 |
| R1307 | T2195 | T2196 | amod | small,phenotype |
| R1308 | T2196 | T2197 | npadvmod | phenotype,related |
| R1309 | T2197 | T2204 | amod | related,protein |
| R1310 | T2198 | T2196 | punct | –,phenotype |
| R1311 | T2199 | T2196 | cc | and,phenotype |
| R1313 | T2200 | T2196 | conj | mothers,phenotype |
| R1314 | T2201 | T2200 | prep | against,mothers |
| R1315 | T2202 | T2201 | pobj | decapentaplegic,against |
| R1318 | T2203 | T2197 | punct | –,related |
| R1319 | T2204 | T2191 | conj | protein,β2 |
| R1321 | T2205 | T2204 | nummod | 2,protein |
| R1322 | T2206 | T2204 | punct | (,protein |
| R1323 | T2207 | T2204 | appos | SMAD2,protein |
| R1325 | T2208 | T2193 | punct | ),signaling |
| R1326 | T2209 | T2210 | amod | upstream,inducers |
| R1328 | T2210 | T2189 | attr | inducers,are |
| R1329 | T2211 | T2210 | prep | of,inducers |
| R1330 | T2212 | T2213 | compound | Snail,expression |
| R1332 | T2213 | T2211 | pobj | expression,of |
| R1333 | T2214 | T2213 | compound | gene,expression |
| R1335 | T2215 | T2189 | prep | in,are |
| R1336 | T2216 | T2217 | compound | skin,epithelium |
| R1338 | T2217 | T2215 | pobj | epithelium,in |
| R1339 | T2218 | T2170 | punct | .,provide |