> top > docs > PMC:539061 > spans > 44698-45472 > annotations

PMC:539061 / 44698-45472 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T7005 60-73 GO:0005576 denotes extracellular
T7006 90-96 PR:000000021 denotes noggin
T7007 118-131 _FRAGMENT denotes generation of
T7008 164-171 GO:0065003 denotes complex
T7009 134-139 PR:000009751 denotes LEF-1
T7010 140-149 PR:000002198 denotes β-catenin
T7011 164-171 GO:0032991 denotes complex
T7012 183-193 PR:000001447 denotes E-cadherin
T7013 224-228 UBERON:0001037 denotes hair
T7014 291-297 PR:000000183 denotes TGF-β2
T7015 318-325 GO:0005634 denotes nuclear
T7016 326-331 PR:000009751 denotes LEF-1
T7017 336-345 PR:000002198 denotes β-catenin
T7018 375-378 _FRAGMENT denotes Wnt
T7019 386-403 GO:0016055 denotes signaling pathway
T7020 379-385 PR:000000021 denotes noggin
T7021 447-460 UBERON:0002073 denotes hair follicle
T7022 447-474 GO:0031069 denotes hair follicle morphogenesis
T7023 476-482 PR:000000183 denotes TGF-β2
T7024 513-519 PR:000000021 denotes noggin
T7025 546-550 UBERON:0001037 denotes hair
T7026 589-594 PR:000015308 denotes Snail
T7027 595-599 SO:0000704 denotes gene
T7028 595-610 GO:0010467 denotes gene expression
T7029 612-618 PR:000000183 denotes TGF-β2
T7030 690-700 PR:000001447 denotes E-cadherin
R4163 T7008 T7007 _lexicallyChainedTo complex,generation of
R4164 T7019 T7018 _lexicallyChainedTo signaling pathway,Wnt

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T7329 194-207 GO_EXT:transcription denotes transcription
T7330 224-228 UBERON:0001037 denotes hair
T7331 284-286 SO_EXT:wild_type_entity_or_quality denotes WT
T7332 291-297 PR_EXT:000000183 denotes TGF-β2
T7333 298-302 SO_EXT:sequence_nullness denotes null
T7335 326-331 PR_EXT:000009751 denotes LEF-1
T7336 336-345 PR_EXT:000002198 denotes β-catenin
T7337 346-358 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T7338 375-378 _FRAGMENT denotes Wnt
T7339 386-403 GO:0016055 denotes signaling pathway
T7340 379-385 PR_EXT:000000021 denotes noggin
T7341 447-460 UBERON:0002073 denotes hair follicle
T7342 447-474 GO:0031069 denotes hair follicle morphogenesis
T7343 476-482 PR_EXT:000000183 denotes TGF-β2
T7344 513-519 PR_EXT:000000021 denotes noggin
T7345 546-550 UBERON:0001037 denotes hair
T7346 589-594 PR_EXT:000015308 denotes Snail
T7347 595-599 SO_EXT:0000704 denotes gene
T7348 595-610 GO:0010467 denotes gene expression
T7349 612-618 PR_EXT:000000183 denotes TGF-β2
T7350 662-672 GO_EXT:0016015 denotes morphogens
T7351 676-689 GO_EXT:negative_regulation denotes down-regulate
T7352 690-700 PR_EXT:000001447 denotes E-cadherin
T7353 748-761 GO_PATO_EXT:cell_proliferation_or_proliferativity denotes proliferative
T7319 60-73 GO:0005576 denotes extracellular
T7320 65-73 CL_GO_EXT:cell denotes cellular
T7321 90-96 PR_EXT:000000021 denotes noggin
T7322 118-131 _FRAGMENT denotes generation of
T7323 164-171 GO:0065003 denotes complex
T7324 134-139 PR_EXT:000009751 denotes LEF-1
T7325 140-149 PR_EXT:000002198 denotes β-catenin
T7326 150-163 GO_EXT:transcription denotes transcription
T7327 164-171 GO:0032991 denotes complex
T7328 183-193 PR_EXT:000001447 denotes E-cadherin
T7334 318-325 GO:0005634 denotes nuclear
R4170 T7323 T7322 _lexicallyChainedTo complex,generation of
R4171 T7339 T7338 _lexicallyChainedTo signaling pathway,Wnt

craft-sa-dev

Id Subject Object Predicate Lexical cue
T8900 0-10 RB denotes Previously
T8901 14-26 VBD denotes demonstrated
T8902 11-13 PRP denotes we
T8903 27-31 IN denotes that
T8904 101-109 VBN denotes required
T8905 32-35 DT denotes the
T8906 46-52 NN denotes action
T8907 36-45 JJ denotes concerted
T8908 53-55 IN denotes of
T8909 56-59 DT denotes the
T8910 74-81 NNS denotes signals
T8911 60-73 JJ denotes extracellular
T8912 82-85 NN denotes Wnt
T8913 86-89 CC denotes and
T8914 90-96 NN denotes noggin
T8915 97-100 VBP denotes are
T8916 110-113 IN denotes for
T8917 175-182 VB denotes repress
T8918 114-117 DT denotes the
T8919 118-128 NN denotes generation
T8920 129-131 IN denotes of
T8921 132-133 DT denotes a
T8922 164-171 NN denotes complex
T8923 134-137 NN denotes LEF
T8924 137-138 HYPH denotes -
T8925 138-139 CD denotes 1
T8926 139-140 HYPH denotes /
T8927 140-141 NN denotes β
T8928 142-149 NN denotes catenin
T8929 141-142 HYPH denotes -
T8930 150-163 NN denotes transcription
T8931 172-174 TO denotes to
T8932 183-184 NN denotes E
T8933 185-193 NN denotes cadherin
T8934 184-185 HYPH denotes -
T8935 194-207 NN denotes transcription
T8936 208-210 IN denotes at
T8937 211-214 DT denotes the
T8938 215-220 NN denotes onset
T8939 221-223 IN denotes of
T8940 224-228 NN denotes hair
T8941 229-233 NN denotes fate
T8942 234-247 NN denotes specification
T8943 247-248 . denotes .
T8944 248-415 sentence denotes As shown in Figure 6I and 6J, both WT and TGF-β2 null buds exhibited nuclear LEF-1 and β-catenin localization, signs that the Wnt-noggin signaling pathway was intact.
T8945 249-251 IN denotes As
T8946 252-257 VBN denotes shown
T8947 308-317 VBD denotes exhibited
T8948 258-260 IN denotes in
T8949 261-267 NN denotes Figure
T8950 268-270 NN denotes 6I
T8951 271-274 CC denotes and
T8952 275-277 NN denotes 6J
T8953 277-279 , denotes ,
T8954 279-283 CC denotes both
T8955 284-286 NN denotes WT
T8956 298-302 JJ denotes null
T8957 287-290 CC denotes and
T8958 291-294 NN denotes TGF
T8959 295-297 NN denotes β2
T8960 294-295 HYPH denotes -
T8961 303-307 NNS denotes buds
T8962 318-325 JJ denotes nuclear
T8963 346-358 NN denotes localization
T8964 326-329 NN denotes LEF
T8965 329-330 HYPH denotes -
T8966 330-331 CD denotes 1
T8967 332-335 CC denotes and
T8968 336-337 NN denotes β
T8969 338-345 NN denotes catenin
T8970 337-338 HYPH denotes -
T8971 358-360 , denotes ,
T8972 360-365 NNS denotes signs
T8973 366-370 IN denotes that
T8974 404-407 VBD denotes was
T8975 371-374 DT denotes the
T8976 396-403 NN denotes pathway
T8977 375-378 NN denotes Wnt
T8978 379-385 NN denotes noggin
T8979 378-379 HYPH denotes -
T8980 386-395 NN denotes signaling
T8981 408-414 JJ denotes intact
T9019 610-612 , denotes ,
T9020 612-615 NN denotes TGF
T9021 616-618 NN denotes β2
T9022 615-616 HYPH denotes -
T9023 627-629 TO denotes to
T9024 630-634 VB denotes work
T9025 635-637 IN denotes in
T9026 638-644 NN denotes tandem
T9027 645-649 IN denotes with
T9028 650-655 DT denotes these
T9029 662-672 NNS denotes morphogens
T9030 656-661 JJ denotes other
T9031 673-675 TO denotes to
T9032 681-689 VB denotes regulate
T9033 676-680 RB denotes down
T9034 680-681 HYPH denotes -
T9035 690-691 NN denotes E
T9036 692-700 NN denotes cadherin
T9037 691-692 HYPH denotes -
T9038 701-707 NNS denotes levels
T9039 707-709 , denotes ,
T9040 709-714 WDT denotes which
T9041 715-726 VBZ denotes contributes
T9042 727-729 IN denotes to
T9043 730-733 DT denotes the
T9044 734-744 NN denotes activation
T9045 745-747 IN denotes of
T9046 748-761 JJ denotes proliferative
T9047 762-773 NNS denotes circuitries
T9048 773-774 . denotes .
T9016 589-594 NN denotes Snail
T9017 600-610 NN denotes expression
T9018 595-599 NN denotes gene
T8982 414-415 . denotes .
T8983 415-556 sentence denotes These data suggest that during hair follicle morphogenesis, TGF-β2 functions subsequently to Wnt/noggin-mediated determination of hair fate.
T8984 416-421 DT denotes These
T8985 422-426 NNS denotes data
T8986 427-434 VBP denotes suggest
T8987 435-439 IN denotes that
T8988 483-492 VBZ denotes functions
T8989 440-446 IN denotes during
T8990 447-451 NN denotes hair
T8991 452-460 NN denotes follicle
T8992 461-474 NN denotes morphogenesis
T8993 474-476 , denotes ,
T8994 476-479 NN denotes TGF
T8995 480-482 NN denotes β2
T8996 479-480 HYPH denotes -
T8997 493-505 RB denotes subsequently
T8998 506-508 IN denotes to
T8999 509-512 NN denotes Wnt
T9000 513-519 NN denotes noggin
T9001 512-513 HYPH denotes /
T9002 520-528 VBN denotes mediated
T9003 519-520 HYPH denotes -
T9004 529-542 NN denotes determination
T9005 543-545 IN denotes of
T9006 546-550 NN denotes hair
T9007 551-555 NN denotes fate
T9008 555-556 . denotes .
T9009 556-774 sentence denotes Moreover, through activation of Snail gene expression, TGF-β2 appears to work in tandem with these other morphogens to down-regulate E-cadherin levels, which contributes to the activation of proliferative circuitries.
T9010 557-565 RB denotes Moreover
T9011 619-626 VBZ denotes appears
T9012 565-567 , denotes ,
T9013 567-574 IN denotes through
T9014 575-585 NN denotes activation
T9015 586-588 IN denotes of
R5602 T8900 T8901 advmod Previously,demonstrated
R5604 T8902 T8901 nsubj we,demonstrated
R5605 T8903 T8904 mark that,required
R5607 T8904 T8901 ccomp required,demonstrated
R5608 T8905 T8906 det the,action
R5609 T8906 T8904 nsubjpass action,required
R5610 T8907 T8906 amod concerted,action
R5611 T8908 T8906 prep of,action
R5613 T8909 T8910 det the,signals
R5614 T8910 T8908 pobj signals,of
R5615 T8911 T8910 amod extracellular,signals
R5617 T8912 T8910 appos Wnt,signals
R5618 T8913 T8912 cc and,Wnt
R5619 T8914 T8912 conj noggin,Wnt
R5621 T8915 T8904 auxpass are,required
R5622 T8916 T8917 mark for,repress
R5625 T8917 T8904 advcl repress,required
R5626 T8918 T8919 det the,generation
R5628 T8919 T8917 nsubj generation,repress
R5629 T8920 T8919 prep of,generation
R5630 T8921 T8922 det a,complex
R5632 T8922 T8920 pobj complex,of
R5633 T8923 T8922 nmod LEF,complex
R5634 T8924 T8923 punct -,LEF
R5636 T8925 T8923 nummod 1,LEF
R5637 T8926 T8923 punct /,LEF
R5638 T8927 T8928 compound β,catenin
R5640 T8928 T8923 appos catenin,LEF
R5641 T8929 T8928 punct -,catenin
R5643 T8930 T8922 compound transcription,complex
R5644 T8931 T8917 aux to,repress
R5645 T8932 T8933 compound E,cadherin
R5647 T8933 T8935 compound cadherin,transcription
R5648 T8934 T8933 punct -,cadherin
R5650 T8935 T8917 dobj transcription,repress
R5651 T8936 T8917 prep at,repress
R5652 T8937 T8938 det the,onset
R5654 T8938 T8936 pobj onset,at
R5655 T8939 T8938 prep of,onset
R5657 T8940 T8941 compound hair,fate
R5658 T8941 T8942 compound fate,specification
R5659 T8942 T8939 pobj specification,of
R5660 T8943 T8901 punct .,demonstrated
R5662 T8945 T8946 mark As,shown
R5663 T8946 T8947 advcl shown,exhibited
R5664 T8948 T8946 prep in,shown
R5666 T8949 T8950 compound Figure,6I
R5667 T8950 T8948 pobj 6I,in
R5669 T8951 T8950 cc and,6I
R5670 T8952 T8950 conj 6J,6I
R5671 T8953 T8947 punct ", ",exhibited
R5673 T8954 T8955 preconj both,WT
R5674 T8955 T8956 npadvmod WT,null
R5676 T8956 T8961 amod null,buds
R5677 T8957 T8955 cc and,WT
R5678 T8958 T8959 compound TGF,β2
R5679 T8959 T8955 conj β2,WT
R5680 T8960 T8959 punct -,β2
R5682 T8961 T8947 nsubj buds,exhibited
R5683 T8962 T8963 amod nuclear,localization
R5684 T8963 T8947 dobj localization,exhibited
R5685 T8964 T8963 nmod LEF,localization
R5687 T8965 T8964 punct -,LEF
R5688 T8966 T8964 nummod 1,LEF
R5689 T8967 T8964 cc and,LEF
R5691 T8968 T8969 compound β,catenin
R5692 T8969 T8964 conj catenin,LEF
R5693 T8970 T8969 punct -,catenin
R5694 T8982 T8947 punct .,exhibited
R5695 T8971 T8947 punct ", ",exhibited
R5696 T8972 T8947 npadvmod signs,exhibited
R5697 T8973 T8974 mark that,was
R5698 T8974 T8972 acl was,signs
R5699 T8975 T8976 det the,pathway
R5700 T8976 T8974 nsubj pathway,was
R5701 T8977 T8978 compound Wnt,noggin
R5702 T8984 T8985 det These,data
R5703 T8978 T8976 compound noggin,pathway
R5704 T8979 T8978 punct -,noggin
R5705 T8980 T8976 compound signaling,pathway
R5706 T8981 T8974 acomp intact,was
R5707 T8985 T8986 nsubj data,suggest
R5708 T8987 T8988 mark that,functions
R5709 T8988 T8986 ccomp functions,suggest
R5710 T8989 T8988 prep during,functions
R5711 T8990 T8991 compound hair,follicle
R5712 T8991 T8992 compound follicle,morphogenesis
R5713 T8992 T8989 pobj morphogenesis,during
R5714 T8993 T8988 punct ", ",functions
R5715 T8994 T8995 compound TGF,β2
R5716 T8995 T8988 nsubj β2,functions
R5717 T8996 T8995 punct -,β2
R5718 T8997 T8988 advmod subsequently,functions
R5719 T8998 T8997 prep to,subsequently
R5720 T8999 T9000 compound Wnt,noggin
R5721 T9000 T9002 npadvmod noggin,mediated
R5722 T9001 T9000 punct /,noggin
R5723 T9002 T9004 amod mediated,determination
R5724 T9003 T9002 punct -,mediated
R5725 T9004 T8998 pobj determination,to
R5726 T9005 T9004 prep of,determination
R5727 T9006 T9007 compound hair,fate
R5728 T9007 T9005 pobj fate,of
R5729 T9008 T8986 punct .,suggest
R5730 T9010 T9011 advmod Moreover,appears
R5731 T9012 T9011 punct ", ",appears
R5732 T9013 T9011 prep through,appears
R5733 T9014 T9013 pobj activation,through
R5734 T9015 T9014 prep of,activation
R5735 T9016 T9017 compound Snail,expression
R5736 T9017 T9015 pobj expression,of
R5737 T9018 T9017 compound gene,expression
R5738 T9019 T9011 punct ", ",appears
R5739 T9020 T9021 compound TGF,β2
R5740 T9021 T9011 nsubj β2,appears
R5741 T9022 T9021 punct -,β2
R5742 T9023 T9024 aux to,work
R5743 T9024 T9011 xcomp work,appears
R5744 T9025 T9024 prep in,work
R5745 T9026 T9025 pobj tandem,in
R5746 T9027 T9026 prep with,tandem
R5747 T9028 T9029 det these,morphogens
R5748 T9029 T9027 pobj morphogens,with
R5749 T9030 T9029 amod other,morphogens
R5750 T9031 T9032 aux to,regulate
R5751 T9032 T9024 advcl regulate,work
R5752 T9033 T9032 advmod down,regulate
R5753 T9034 T9032 punct -,regulate
R5754 T9035 T9036 compound E,cadherin
R5755 T9036 T9038 compound cadherin,levels
R5756 T9037 T9036 punct -,cadherin
R5757 T9038 T9032 dobj levels,regulate
R5758 T9039 T9024 punct ", ",work
R5759 T9040 T9041 dep which,contributes
R5760 T9041 T9024 advcl contributes,work
R5761 T9042 T9041 prep to,contributes
R5762 T9043 T9044 det the,activation
R5763 T9044 T9042 pobj activation,to
R5764 T9045 T9044 prep of,activation
R5765 T9046 T9047 amod proliferative,circuitries
R5766 T9047 T9045 pobj circuitries,of
R5767 T9048 T9011 punct .,appears