PMC:539061 / 40012-40284
Annnotations
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6911 | 62-68 | PR:000000183 | denotes | TGF-β2 |
| T6912 | 131-137 | PR:000000183 | denotes | TGF-β2 |
| T6913 | 180-195 | SO:0000409 | denotes | binding element |
| T6914 | 229-234 | PR:000015308 | denotes | Snail |
| T6915 | 235-259 | SO:0000315 | denotes | transcription start site |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7178 | 62-68 | PR_EXT:000000183 | denotes | TGF-β2 |
| T7179 | 131-137 | PR_EXT:000000183 | denotes | TGF-β2 |
| T7180 | 138-145 | CHEBI_PR_EXT:protein | denotes | protein |
| T7181 | 152-160 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutation |
| T7182 | 175-179 | GO_PR_EXT:SMAD | denotes | SMAD |
| T7183 | 180-187 | CHEMINF_GO_EXT:chemical_binding_or_bond_formation | denotes | binding |
| T7184 | 180-195 | SO_EXT:0000409 | denotes | binding element |
| T7185 | 215-216 | CHEBI_SO_EXT:base | denotes | b |
| T7186 | 217-219 | SO_EXT:sequence_upstreamness | denotes | 5′ |
| T7187 | 229-234 | PR_EXT:000015308 | denotes | Snail |
| T7188 | 235-248 | GO_EXT:transcription | denotes | transcription |
| T7189 | 235-259 | SO_EXT:0000315 | denotes | transcription start site |
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8147 | 0-272 | sentence | denotes | Moreover, the stimulatory effects appeared to be specific to TGF-β2, since they were abrogated either by heat inactivation of the TGF-β2 protein or by mutation of a putative SMAD binding element located about 1.8 kb 5′ from the Snail transcription start site (Figure 5D). |
| T8148 | 1-9 | RB | denotes | Moreover |
| T8149 | 35-43 | VBD | denotes | appeared |
| T8150 | 9-11 | , | denotes | , |
| T8151 | 11-14 | DT | denotes | the |
| T8152 | 27-34 | NNS | denotes | effects |
| T8153 | 15-26 | JJ | denotes | stimulatory |
| T8154 | 44-46 | TO | denotes | to |
| T8155 | 47-49 | VB | denotes | be |
| T8156 | 50-58 | JJ | denotes | specific |
| T8157 | 59-61 | IN | denotes | to |
| T8158 | 62-65 | NN | denotes | TGF |
| T8159 | 66-68 | NN | denotes | β2 |
| T8160 | 65-66 | HYPH | denotes | - |
| T8161 | 68-70 | , | denotes | , |
| T8162 | 70-75 | IN | denotes | since |
| T8163 | 86-95 | VBN | denotes | abrogated |
| T8164 | 76-80 | PRP | denotes | they |
| T8165 | 81-85 | VBD | denotes | were |
| T8166 | 96-102 | CC | denotes | either |
| T8167 | 103-105 | IN | denotes | by |
| T8168 | 106-110 | NN | denotes | heat |
| T8169 | 111-123 | NN | denotes | inactivation |
| T8170 | 124-126 | IN | denotes | of |
| T8171 | 127-130 | DT | denotes | the |
| T8172 | 138-145 | NN | denotes | protein |
| T8173 | 131-134 | NN | denotes | TGF |
| T8174 | 135-137 | NN | denotes | β2 |
| T8175 | 134-135 | HYPH | denotes | - |
| T8176 | 146-148 | CC | denotes | or |
| T8177 | 149-151 | IN | denotes | by |
| T8178 | 152-160 | NN | denotes | mutation |
| T8179 | 161-163 | IN | denotes | of |
| T8180 | 164-165 | DT | denotes | a |
| T8181 | 188-195 | NN | denotes | element |
| T8182 | 166-174 | JJ | denotes | putative |
| T8183 | 175-179 | NN | denotes | SMAD |
| T8184 | 180-187 | NN | denotes | binding |
| T8185 | 196-203 | VBN | denotes | located |
| T8186 | 204-209 | IN | denotes | about |
| T8187 | 210-213 | CD | denotes | 1.8 |
| T8188 | 214-216 | NN | denotes | kb |
| T8189 | 217-218 | CD | denotes | 5 |
| T8190 | 218-219 | SYM | denotes | ′ |
| T8191 | 220-224 | IN | denotes | from |
| T8192 | 225-228 | DT | denotes | the |
| T8193 | 255-259 | NN | denotes | site |
| T8194 | 229-234 | NN | denotes | Snail |
| T8195 | 235-248 | NN | denotes | transcription |
| T8196 | 249-254 | NN | denotes | start |
| T8197 | 260-261 | -LRB- | denotes | ( |
| T8198 | 268-270 | NN | denotes | 5D |
| T8199 | 261-267 | NN | denotes | Figure |
| T8200 | 270-271 | -RRB- | denotes | ) |
| T8201 | 271-272 | . | denotes | . |
| R4916 | T8148 | T8149 | advmod | Moreover,appeared |
| R4917 | T8150 | T8149 | punct | ", ",appeared |
| R4918 | T8151 | T8152 | det | the,effects |
| R4919 | T8152 | T8149 | nsubj | effects,appeared |
| R4920 | T8153 | T8152 | amod | stimulatory,effects |
| R4921 | T8154 | T8155 | aux | to,be |
| R4922 | T8155 | T8149 | xcomp | be,appeared |
| R4923 | T8156 | T8155 | acomp | specific,be |
| R4924 | T8157 | T8156 | prep | to,specific |
| R4925 | T8158 | T8159 | compound | TGF,β2 |
| R4926 | T8159 | T8157 | pobj | β2,to |
| R4927 | T8160 | T8159 | punct | -,β2 |
| R4928 | T8161 | T8155 | punct | ", ",be |
| R4929 | T8162 | T8163 | mark | since,abrogated |
| R4930 | T8163 | T8155 | advcl | abrogated,be |
| R4931 | T8164 | T8163 | nsubjpass | they,abrogated |
| R4932 | T8165 | T8163 | auxpass | were,abrogated |
| R4933 | T8166 | T8167 | preconj | either,by |
| R4934 | T8167 | T8163 | prep | by,abrogated |
| R4935 | T8168 | T8169 | compound | heat,inactivation |
| R4936 | T8169 | T8167 | pobj | inactivation,by |
| R4937 | T8170 | T8169 | prep | of,inactivation |
| R4938 | T8171 | T8172 | det | the,protein |
| R4939 | T8172 | T8170 | pobj | protein,of |
| R4940 | T8173 | T8174 | compound | TGF,β2 |
| R4941 | T8174 | T8172 | compound | β2,protein |
| R4942 | T8175 | T8174 | punct | -,β2 |
| R4943 | T8176 | T8167 | cc | or,by |
| R4944 | T8177 | T8167 | conj | by,by |
| R4945 | T8178 | T8177 | pobj | mutation,by |
| R4946 | T8179 | T8178 | prep | of,mutation |
| R4947 | T8180 | T8181 | det | a,element |
| R4948 | T8181 | T8179 | pobj | element,of |
| R4949 | T8182 | T8181 | amod | putative,element |
| R4950 | T8183 | T8184 | compound | SMAD,binding |
| R4951 | T8184 | T8181 | compound | binding,element |
| R4952 | T8185 | T8181 | acl | located,element |
| R4953 | T8186 | T8187 | quantmod | about,1.8 |
| R4954 | T8187 | T8188 | nummod | 1.8,kb |
| R4955 | T8188 | T8185 | npadvmod | kb,located |
| R4956 | T8189 | T8188 | nummod | 5,kb |
| R4957 | T8190 | T8188 | punct | ′,kb |
| R4958 | T8191 | T8188 | prep | from,kb |
| R4959 | T8192 | T8193 | det | the,site |
| R4960 | T8193 | T8191 | pobj | site,from |
| R4961 | T8194 | T8193 | compound | Snail,site |
| R4962 | T8195 | T8193 | compound | transcription,site |
| R4963 | T8196 | T8193 | compound | start,site |
| R4964 | T8197 | T8198 | punct | (,5D |
| R4965 | T8198 | T8163 | parataxis | 5D,abrogated |
| R4966 | T8199 | T8198 | compound | Figure,5D |
| R4967 | T8200 | T8198 | punct | ),5D |
| R4968 | T8201 | T8149 | punct | .,appeared |