PMC:529315 / 31857-32611
Annnotations
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the bag model. You can change it to the chain model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17327 | 0-20 | UBERON:0001388 | denotes | Gastrocnemius muscle |
| T17328 | 45-49 | NCBITaxon_UBERON_EXT:pup | denotes | pups |
| T17329 | 109-112 | UBERON:0000978 | denotes | leg |
| T17330 | 129-149 | UBERON:0001388 | denotes | gastrocnemius muscle |
| T17331 | 155-167 | UBERON:0001323 | denotes | tibial nerve |
| T17332 | 244-252 | GO:0042571 | denotes | antibody |
| T17333 | 293-300 | UBERON:0003718 | denotes | spindle |
| T17334 | 340-347 | SO_EXT:0001060 | denotes | isoform |
| T17335 | 372-377 | NCBITaxon:10088 | denotes | mouse |
| T17336 | 381-386 | NCBITaxon:10088 | denotes | mouse |
| T17337 | 423-429 | NCBITaxon:9986 | denotes | rabbit |
| T17338 | 435-437 | GO:0005883 | denotes | NF |
| T17339 | 435-439 | PR_EXT:000011120 | denotes | NF-M |
| T17340 | 440-448 | GO:0042571 | denotes | antibody |
| T17341 | 464-467 | CHEBI:37987 | denotes | CY3 |
| T17342 | 468-478 | MOP:0000779 | denotes | conjugated |
| T17343 | 479-483 | NCBITaxon:9925 | denotes | goat |
| T17344 | 489-495 | NCBITaxon:9986 | denotes | rabbit |
| T17345 | 496-504 | GO:0042571 | denotes | antibody |
| T17346 | 539-547 | CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process | denotes | labeling |
| T17347 | 577-580 | CHEBI:52029 | denotes | DiI |
| T17348 | 605-609 | UBERON:0000044 | denotes | DRGs |
| T17349 | 617-624 | UBERON:0000922 | denotes | embryos |
| T17350 | 640-649 | SO_EXT:genotype_or_entity_with_genotype | denotes | genotypes |
| T17351 | 667-687 | UBERON:0001388 | denotes | gastrocnemius muscle |
craft-ca-core-dev
Below, discontinuous spans are shown in the bag model. You can change it to the chain model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17304 | 0-20 | UBERON:0001388 | denotes | Gastrocnemius muscle |
| T17305 | 109-112 | UBERON:0000978 | denotes | leg |
| T17306 | 129-149 | UBERON:0001388 | denotes | gastrocnemius muscle |
| T17307 | 155-167 | UBERON:0001323 | denotes | tibial nerve |
| T17308 | 244-252 | GO:0042571 | denotes | antibody |
| T17309 | 293-300 | UBERON:0003718 | denotes | spindle |
| T17310 | 340-347 | SO:0001060 | denotes | isoform |
| T17311 | 372-377 | NCBITaxon:10088 | denotes | mouse |
| T17312 | 381-386 | NCBITaxon:10088 | denotes | mouse |
| T17313 | 423-429 | NCBITaxon:9986 | denotes | rabbit |
| T17314 | 435-437 | GO:0005883 | denotes | NF |
| T17315 | 435-439 | PR:000011120 | denotes | NF-M |
| T17316 | 440-448 | GO:0042571 | denotes | antibody |
| T17317 | 464-467 | CHEBI:37987 | denotes | CY3 |
| T17318 | 468-478 | MOP:0000779 | denotes | conjugated |
| T17319 | 479-483 | NCBITaxon:9925 | denotes | goat |
| T17320 | 489-495 | NCBITaxon:9986 | denotes | rabbit |
| T17321 | 496-504 | GO:0042571 | denotes | antibody |
| T17322 | 577-580 | CHEBI:52029 | denotes | DiI |
| T17323 | 605-609 | UBERON:0000044 | denotes | DRGs |
| T17324 | 617-624 | UBERON:0000922 | denotes | embryos |
| T17325 | 667-687 | UBERON:0001388 | denotes | gastrocnemius muscle |
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T17357 | 0-13 | NN | denotes | Gastrocnemius |
| T17358 | 14-20 | NN | denotes | muscle |
| T17359 | 25-34 | VBN | denotes | dissected |
| T17360 | 21-24 | VBD | denotes | was |
| T17361 | 35-38 | RP | denotes | out |
| T17362 | 39-41 | IN | denotes | in |
| T17363 | 42-44 | NN | denotes | P0 |
| T17364 | 45-49 | NNS | denotes | pups |
| T17365 | 50-53 | CC | denotes | and |
| T17366 | 54-63 | VBN | denotes | sectioned |
| T17367 | 64-78 | RB | denotes | longitudinally |
| T17368 | 78-80 | , | denotes | , |
| T17369 | 80-82 | CC | denotes | or |
| T17370 | 82-84 | , | denotes | , |
| T17371 | 84-86 | IN | denotes | in |
| T17372 | 172-181 | VBN | denotes | sectioned |
| T17373 | 87-91 | DT | denotes | some |
| T17374 | 92-97 | NNS | denotes | cases |
| T17375 | 97-99 | , | denotes | , |
| T17376 | 99-102 | DT | denotes | the |
| T17377 | 109-112 | NN | denotes | leg |
| T17378 | 103-108 | JJ | denotes | whole |
| T17379 | 113-115 | IN | denotes | at |
| T17380 | 116-119 | DT | denotes | the |
| T17381 | 120-125 | NN | denotes | level |
| T17382 | 126-128 | IN | denotes | of |
| T17383 | 129-142 | NN | denotes | gastrocnemius |
| T17384 | 143-149 | NN | denotes | muscle |
| T17385 | 150-154 | IN | denotes | with |
| T17386 | 155-161 | JJ | denotes | tibial |
| T17387 | 162-167 | NN | denotes | nerve |
| T17388 | 168-171 | VBD | denotes | was |
| T17389 | 182-184 | IN | denotes | in |
| T17390 | 185-190 | NN | denotes | cross |
| T17391 | 191-198 | NN | denotes | section |
| T17392 | 198-199 | . | denotes | . |
| T17393 | 199-557 | sentence | denotes | Sections were incubated with monoclonal S46 antibody (gift of Dr. Stockdale) reactive to the spindle-specific slow-tonic myosin heavy chain isoform and developed by Vector mouse on mouse kit as described above, followed by rabbit anti-NF-M antibody (Chemicon) and CY3 conjugated goat anti-rabbit antibody (Chemicon) in a sequential double-labeling protocol. |
| T17394 | 200-208 | NNS | denotes | Sections |
| T17395 | 214-223 | VBN | denotes | incubated |
| T17396 | 209-213 | VBD | denotes | were |
| T17397 | 224-228 | IN | denotes | with |
| T17398 | 229-239 | JJ | denotes | monoclonal |
| T17399 | 244-252 | NN | denotes | antibody |
| T17400 | 240-243 | NN | denotes | S46 |
| T17401 | 253-254 | -LRB- | denotes | ( |
| T17402 | 254-258 | NN | denotes | gift |
| T17403 | 259-261 | IN | denotes | of |
| T17404 | 262-265 | NNP | denotes | Dr. |
| T17405 | 266-275 | NNP | denotes | Stockdale |
| T17406 | 275-276 | -RRB- | denotes | ) |
| T17407 | 277-285 | JJ | denotes | reactive |
| T17408 | 286-288 | IN | denotes | to |
| T17409 | 289-292 | DT | denotes | the |
| T17410 | 340-347 | NN | denotes | isoform |
| T17411 | 293-300 | NN | denotes | spindle |
| T17412 | 301-309 | JJ | denotes | specific |
| T17413 | 300-301 | HYPH | denotes | - |
| T17414 | 310-314 | JJ | denotes | slow |
| T17415 | 315-320 | NN | denotes | tonic |
| T17416 | 314-315 | HYPH | denotes | - |
| T17417 | 321-327 | NN | denotes | myosin |
| T17418 | 328-333 | JJ | denotes | heavy |
| T17419 | 334-339 | NN | denotes | chain |
| T17420 | 348-351 | CC | denotes | and |
| T17421 | 352-361 | VBN | denotes | developed |
| T17422 | 362-364 | IN | denotes | by |
| T17423 | 365-371 | NNP | denotes | Vector |
| T17424 | 387-390 | NN | denotes | kit |
| T17425 | 372-377 | NN | denotes | mouse |
| T17426 | 378-380 | IN | denotes | on |
| T17427 | 381-386 | NN | denotes | mouse |
| T17428 | 391-393 | IN | denotes | as |
| T17429 | 394-403 | VBN | denotes | described |
| T17430 | 404-409 | RB | denotes | above |
| T17431 | 409-411 | , | denotes | , |
| T17432 | 411-419 | VBN | denotes | followed |
| T17433 | 420-422 | IN | denotes | by |
| T17434 | 423-429 | NN | denotes | rabbit |
| T17435 | 440-448 | NN | denotes | antibody |
| T17436 | 430-437 | JJ | denotes | anti-NF |
| T17437 | 438-439 | NN | denotes | M |
| T17438 | 437-438 | HYPH | denotes | - |
| T17439 | 449-450 | -LRB- | denotes | ( |
| T17440 | 450-458 | NNP | denotes | Chemicon |
| T17441 | 458-459 | -RRB- | denotes | ) |
| T17442 | 460-463 | CC | denotes | and |
| T17443 | 464-467 | NN | denotes | CY3 |
| T17444 | 496-504 | NN | denotes | antibody |
| T17445 | 468-478 | VBN | denotes | conjugated |
| T17446 | 479-483 | NN | denotes | goat |
| T17447 | 484-495 | JJ | denotes | anti-rabbit |
| T17448 | 505-506 | -LRB- | denotes | ( |
| T17449 | 506-514 | NNP | denotes | Chemicon |
| T17450 | 514-515 | -RRB- | denotes | ) |
| T17451 | 516-518 | IN | denotes | in |
| T17452 | 519-520 | DT | denotes | a |
| T17453 | 548-556 | NN | denotes | protocol |
| T17454 | 521-531 | JJ | denotes | sequential |
| T17455 | 532-538 | JJ | denotes | double |
| T17456 | 539-547 | NN | denotes | labeling |
| T17457 | 538-539 | HYPH | denotes | - |
| T17458 | 556-557 | . | denotes | . |
| T17459 | 557-754 | sentence | denotes | In another method, DiI crystals were placed in DRGs of E17 embryos from different genotypes (n = 2), and the gastrocnemius muscle was isolated and sectioned into 40-μm-thick slices on a vibratome. |
| T17460 | 558-560 | IN | denotes | In |
| T17461 | 595-601 | VBN | denotes | placed |
| T17462 | 561-568 | DT | denotes | another |
| T17463 | 569-575 | NN | denotes | method |
| T17464 | 575-577 | , | denotes | , |
| T17465 | 577-580 | NN | denotes | DiI |
| T17466 | 581-589 | NNS | denotes | crystals |
| T17467 | 590-594 | VBD | denotes | were |
| T17468 | 602-604 | IN | denotes | in |
| T17469 | 605-609 | NNS | denotes | DRGs |
| T17470 | 610-612 | IN | denotes | of |
| T17471 | 613-616 | NN | denotes | E17 |
| T17472 | 617-624 | NNS | denotes | embryos |
| T17473 | 625-629 | IN | denotes | from |
| T17474 | 630-639 | JJ | denotes | different |
| T17475 | 640-649 | NNS | denotes | genotypes |
| T17476 | 650-651 | -LRB- | denotes | ( |
| T17477 | 655-656 | CD | denotes | 2 |
| T17478 | 651-652 | NN | denotes | n |
| T17479 | 653-654 | SYM | denotes | = |
| T17480 | 656-657 | -RRB- | denotes | ) |
| T17481 | 657-659 | , | denotes | , |
| T17482 | 659-662 | CC | denotes | and |
| T17483 | 663-666 | DT | denotes | the |
| T17484 | 681-687 | NN | denotes | muscle |
| T17485 | 667-680 | NN | denotes | gastrocnemius |
| T17486 | 692-700 | VBN | denotes | isolated |
| T17487 | 688-691 | VBD | denotes | was |
| T17488 | 701-704 | CC | denotes | and |
| T17489 | 705-714 | VBN | denotes | sectioned |
| T17490 | 715-719 | IN | denotes | into |
| T17491 | 720-722 | CD | denotes | 40 |
| T17492 | 723-725 | NN | denotes | μm |
| T17493 | 722-723 | HYPH | denotes | - |
| T17494 | 726-731 | JJ | denotes | thick |
| T17495 | 725-726 | HYPH | denotes | - |
| T17496 | 732-738 | NNS | denotes | slices |
| T17497 | 739-741 | IN | denotes | on |
| T17498 | 742-743 | DT | denotes | a |
| T17499 | 744-753 | NN | denotes | vibratome |
| T17500 | 753-754 | . | denotes | . |
| R5087 | T17357 | T17358 | compound | Gastrocnemius,muscle |
| R5088 | T17358 | T17359 | nsubjpass | muscle,dissected |
| R5089 | T17360 | T17359 | auxpass | was,dissected |
| R5090 | T17361 | T17359 | prt | out,dissected |
| R5091 | T17362 | T17359 | prep | in,dissected |
| R5092 | T17363 | T17364 | compound | P0,pups |
| R5093 | T17364 | T17362 | pobj | pups,in |
| R5094 | T17365 | T17359 | cc | and,dissected |
| R5095 | T17366 | T17359 | conj | sectioned,dissected |
| R5096 | T17367 | T17366 | advmod | longitudinally,sectioned |
| R5097 | T17368 | T17359 | punct | ", ",dissected |
| R5098 | T17369 | T17359 | cc | or,dissected |
| R5099 | T17370 | T17359 | punct | ", ",dissected |
| R5100 | T17371 | T17372 | prep | in,sectioned |
| R5101 | T17372 | T17359 | conj | sectioned,dissected |
| R5102 | T17373 | T17374 | det | some,cases |
| R5103 | T17374 | T17371 | pobj | cases,in |
| R5104 | T17375 | T17372 | punct | ", ",sectioned |
| R5105 | T17376 | T17377 | det | the,leg |
| R5106 | T17377 | T17372 | nsubjpass | leg,sectioned |
| R5107 | T17378 | T17377 | amod | whole,leg |
| R5108 | T17379 | T17377 | prep | at,leg |
| R5109 | T17380 | T17381 | det | the,level |
| R5110 | T17381 | T17379 | pobj | level,at |
| R5111 | T17382 | T17381 | prep | of,level |
| R5112 | T17383 | T17384 | compound | gastrocnemius,muscle |
| R5113 | T17384 | T17382 | pobj | muscle,of |
| R5114 | T17385 | T17384 | prep | with,muscle |
| R5115 | T17386 | T17387 | amod | tibial,nerve |
| R5116 | T17387 | T17385 | pobj | nerve,with |
| R5117 | T17388 | T17372 | auxpass | was,sectioned |
| R5118 | T17389 | T17372 | prep | in,sectioned |
| R5119 | T17390 | T17391 | compound | cross,section |
| R5120 | T17391 | T17389 | pobj | section,in |
| R5121 | T17392 | T17372 | punct | .,sectioned |
| R5122 | T17394 | T17395 | nsubj | Sections,incubated |
| R5123 | T17396 | T17395 | aux | were,incubated |
| R5124 | T17397 | T17395 | prep | with,incubated |
| R5125 | T17398 | T17399 | amod | monoclonal,antibody |
| R5126 | T17399 | T17397 | pobj | antibody,with |
| R5127 | T17400 | T17399 | compound | S46,antibody |
| R5128 | T17401 | T17402 | punct | (,gift |
| R5129 | T17402 | T17399 | parataxis | gift,antibody |
| R5130 | T17403 | T17402 | prep | of,gift |
| R5131 | T17404 | T17405 | compound | Dr.,Stockdale |
| R5132 | T17405 | T17403 | pobj | Stockdale,of |
| R5133 | T17406 | T17402 | punct | ),gift |
| R5134 | T17407 | T17399 | amod | reactive,antibody |
| R5135 | T17408 | T17407 | prep | to,reactive |
| R5136 | T17409 | T17410 | det | the,isoform |
| R5137 | T17410 | T17408 | pobj | isoform,to |
| R5138 | T17411 | T17412 | npadvmod | spindle,specific |
| R5139 | T17412 | T17410 | amod | specific,isoform |
| R5140 | T17413 | T17412 | punct | -,specific |
| R5141 | T17414 | T17415 | amod | slow,tonic |
| R5142 | T17415 | T17410 | nmod | tonic,isoform |
| R5143 | T17416 | T17415 | punct | -,tonic |
| R5144 | T17417 | T17410 | nmod | myosin,isoform |
| R5145 | T17418 | T17419 | amod | heavy,chain |
| R5146 | T17419 | T17410 | compound | chain,isoform |
| R5147 | T17420 | T17395 | cc | and,incubated |
| R5148 | T17421 | T17395 | conj | developed,incubated |
| R5149 | T17422 | T17421 | prep | by,developed |
| R5150 | T17423 | T17424 | nmod | Vector,kit |
| R5151 | T17424 | T17422 | pobj | kit,by |
| R5152 | T17425 | T17424 | nmod | mouse,kit |
| R5153 | T17426 | T17425 | prep | on,mouse |
| R5154 | T17427 | T17426 | pobj | mouse,on |
| R5155 | T17428 | T17429 | mark | as,described |
| R5156 | T17429 | T17421 | advcl | described,developed |
| R5157 | T17430 | T17429 | advmod | above,described |
| R5158 | T17431 | T17395 | punct | ", ",incubated |
| R5159 | T17432 | T17395 | advcl | followed,incubated |
| R5160 | T17433 | T17432 | agent | by,followed |
| R5161 | T17434 | T17435 | nmod | rabbit,antibody |
| R5162 | T17435 | T17433 | pobj | antibody,by |
| R5163 | T17436 | T17437 | amod | anti-NF,M |
| R5164 | T17437 | T17435 | compound | M,antibody |
| R5165 | T17438 | T17437 | punct | -,M |
| R5166 | T17439 | T17440 | punct | (,Chemicon |
| R5167 | T17440 | T17435 | parataxis | Chemicon,antibody |
| R5168 | T17441 | T17440 | punct | ),Chemicon |
| R5169 | T17442 | T17435 | cc | and,antibody |
| R5170 | T17443 | T17444 | nmod | CY3,antibody |
| R5171 | T17444 | T17435 | conj | antibody,antibody |
| R5172 | T17445 | T17444 | amod | conjugated,antibody |
| R5173 | T17446 | T17444 | nmod | goat,antibody |
| R5174 | T17447 | T17444 | amod | anti-rabbit,antibody |
| R5175 | T17448 | T17449 | punct | (,Chemicon |
| R5176 | T17449 | T17444 | parataxis | Chemicon,antibody |
| R5177 | T17450 | T17449 | punct | ),Chemicon |
| R5178 | T17451 | T17432 | prep | in,followed |
| R5179 | T17452 | T17453 | det | a,protocol |
| R5180 | T17453 | T17451 | pobj | protocol,in |
| R5181 | T17454 | T17453 | amod | sequential,protocol |
| R5182 | T17455 | T17456 | amod | double,labeling |
| R5183 | T17456 | T17453 | compound | labeling,protocol |
| R5184 | T17457 | T17456 | punct | -,labeling |
| R5185 | T17458 | T17395 | punct | .,incubated |
| R5186 | T17460 | T17461 | prep | In,placed |
| R5187 | T17462 | T17463 | det | another,method |
| R5188 | T17463 | T17460 | pobj | method,In |
| R5189 | T17464 | T17461 | punct | ", ",placed |
| R5190 | T17465 | T17466 | compound | DiI,crystals |
| R5191 | T17466 | T17461 | nsubjpass | crystals,placed |
| R5192 | T17467 | T17461 | auxpass | were,placed |
| R5193 | T17468 | T17461 | prep | in,placed |
| R5194 | T17469 | T17468 | pobj | DRGs,in |
| R5195 | T17470 | T17469 | prep | of,DRGs |
| R5196 | T17471 | T17472 | compound | E17,embryos |
| R5197 | T17472 | T17470 | pobj | embryos,of |
| R5198 | T17473 | T17472 | prep | from,embryos |
| R5199 | T17474 | T17475 | amod | different,genotypes |
| R5200 | T17475 | T17473 | pobj | genotypes,from |
| R5201 | T17476 | T17477 | punct | (,2 |
| R5202 | T17477 | T17472 | parataxis | 2,embryos |
| R5203 | T17478 | T17477 | nsubj | n,2 |
| R5204 | T17479 | T17477 | punct | =,2 |
| R5205 | T17480 | T17477 | punct | ),2 |
| R5206 | T17481 | T17461 | punct | ", ",placed |
| R5207 | T17482 | T17461 | cc | and,placed |
| R5208 | T17483 | T17484 | det | the,muscle |
| R5209 | T17484 | T17486 | nsubjpass | muscle,isolated |
| R5210 | T17485 | T17484 | compound | gastrocnemius,muscle |
| R5211 | T17486 | T17461 | conj | isolated,placed |
| R5212 | T17487 | T17486 | auxpass | was,isolated |
| R5213 | T17488 | T17486 | cc | and,isolated |
| R5214 | T17489 | T17486 | conj | sectioned,isolated |
| R5215 | T17490 | T17489 | prep | into,sectioned |
| R5216 | T17491 | T17492 | nummod | 40,μm |
| R5217 | T17492 | T17494 | npadvmod | μm,thick |
| R5218 | T17493 | T17492 | punct | -,μm |
| R5219 | T17494 | T17496 | amod | thick,slices |
| R5220 | T17495 | T17494 | punct | -,thick |
| R5221 | T17496 | T17490 | pobj | slices,into |
| R5222 | T17497 | T17489 | prep | on,sectioned |
| R5223 | T17498 | T17499 | det | a,vibratome |
| R5224 | T17499 | T17497 | pobj | vibratome,on |
| R5225 | T17500 | T17486 | punct | .,isolated |