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PMC:523229 / 8867-9154 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T2745 0-287 sentence denotes A bacterial artificial chromosome (BAC) containing the Gdf5 locus was modified by homologous recombination in bacteria to insert a cassette encoding Cre-internal ribosome entry site (IRES)-human placental alkaline phosphatase (hPLAP) into the translation start site of Gdf5 (Figure 1A).
T2746 1-2 DT denotes A
T2747 24-34 NN denotes chromosome
T2748 3-12 JJ denotes bacterial
T2749 13-23 JJ denotes artificial
T2750 71-79 VBN denotes modified
T2751 35-36 -LRB- denotes (
T2752 36-39 NN denotes BAC
T2753 39-40 -RRB- denotes )
T2754 41-51 VBG denotes containing
T2755 52-55 DT denotes the
T2756 61-66 NN denotes locus
T2757 56-60 NN denotes Gdf5
T2758 67-70 VBD denotes was
T2759 80-82 IN denotes by
T2760 83-93 JJ denotes homologous
T2761 94-107 NN denotes recombination
T2762 108-110 IN denotes in
T2763 111-119 NNS denotes bacteria
T2764 120-122 TO denotes to
T2765 123-129 VB denotes insert
T2766 130-131 DT denotes a
T2767 132-140 NN denotes cassette
T2768 141-149 VBG denotes encoding
T2769 150-153 NN denotes Cre
T2770 215-226 NN denotes phosphatase
T2771 153-154 HYPH denotes -
T2772 154-162 JJ denotes internal
T2773 172-177 NN denotes entry
T2774 163-171 NN denotes ribosome
T2775 178-182 NN denotes site
T2776 183-184 -LRB- denotes (
T2777 184-188 NN denotes IRES
T2778 188-189 -RRB- denotes )
T2779 189-190 HYPH denotes -
T2780 190-195 JJ denotes human
T2781 196-205 JJ denotes placental
T2782 206-214 NN denotes alkaline
T2783 227-228 -LRB- denotes (
T2784 228-233 NN denotes hPLAP
T2785 233-234 -RRB- denotes )
T2786 235-239 IN denotes into
T2787 240-243 DT denotes the
T2788 262-266 NN denotes site
T2789 244-255 NN denotes translation
T2790 256-261 NN denotes start
T2791 267-269 IN denotes of
T2792 270-274 NN denotes Gdf5
T2793 275-276 -LRB- denotes (
T2794 276-282 NN denotes Figure
T2795 283-285 CD denotes 1A
T2796 285-286 -RRB- denotes )
T2797 286-287 . denotes .
R1485 T2746 T2747 det A,chromosome
R1486 T2747 T2750 nsubjpass chromosome,modified
R1487 T2748 T2749 amod bacterial,artificial
R1488 T2749 T2747 amod artificial,chromosome
R1489 T2751 T2747 punct (,chromosome
R1490 T2752 T2747 appos BAC,chromosome
R1491 T2753 T2747 punct ),chromosome
R1492 T2754 T2747 acl containing,chromosome
R1493 T2755 T2756 det the,locus
R1494 T2756 T2754 dobj locus,containing
R1495 T2757 T2756 compound Gdf5,locus
R1496 T2758 T2750 auxpass was,modified
R1497 T2759 T2750 prep by,modified
R1498 T2760 T2761 amod homologous,recombination
R1499 T2761 T2759 pobj recombination,by
R1500 T2762 T2750 prep in,modified
R1501 T2763 T2762 pobj bacteria,in
R1502 T2764 T2765 aux to,insert
R1503 T2765 T2750 advcl insert,modified
R1504 T2766 T2767 det a,cassette
R1505 T2767 T2765 dobj cassette,insert
R1506 T2768 T2767 acl encoding,cassette
R1507 T2769 T2770 nmod Cre,phosphatase
R1508 T2770 T2768 dobj phosphatase,encoding
R1509 T2771 T2770 punct -,phosphatase
R1510 T2772 T2773 amod internal,entry
R1511 T2773 T2775 nmod entry,site
R1512 T2774 T2773 nmod ribosome,entry
R1513 T2775 T2770 nmod site,phosphatase
R1514 T2776 T2775 punct (,site
R1515 T2777 T2775 appos IRES,site
R1516 T2778 T2775 punct ),site
R1517 T2779 T2770 punct -,phosphatase
R1518 T2780 T2781 amod human,placental
R1519 T2781 T2770 amod placental,phosphatase
R1520 T2782 T2770 compound alkaline,phosphatase
R1521 T2783 T2770 punct (,phosphatase
R1522 T2784 T2770 appos hPLAP,phosphatase
R1523 T2785 T2770 punct ),phosphatase
R1524 T2786 T2765 prep into,insert
R1525 T2787 T2788 det the,site
R1526 T2788 T2786 pobj site,into
R1527 T2789 T2788 compound translation,site
R1528 T2790 T2788 compound start,site
R1529 T2791 T2788 prep of,site
R1530 T2792 T2791 pobj Gdf5,of
R1531 T2793 T2794 punct (,Figure
R1532 T2794 T2765 parataxis Figure,insert
R1533 T2795 T2794 nummod 1A,Figure
R1534 T2796 T2794 punct ),Figure
R1535 T2797 T2750 punct .,modified

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T2501 3-12 NCBITaxon:2 denotes bacterial
T2502 3-34 SO_EXT:0000153 denotes bacterial artificial chromosome
T2503 24-34 GO_SO_EXT:chromosome denotes chromosome
T2504 36-39 SO_EXT:0000153 denotes BAC
T2505 56-60 PR_EXT:000000281 denotes Gdf5
T2506 71-79 SO_EXT:sequence_alteration_process denotes modified
T2507 94-107 GO_SO_EXT:sequence_rearrangement_process denotes recombination
T2508 111-119 NCBITaxon:2 denotes bacteria
T2509 123-129 SO_EXT:sequence_insertion_process denotes insert
T2510 132-140 SO_EXT:0005853 denotes cassette
T2511 141-149 SO_EXT:sequence_coding_function denotes encoding
T2512 154-182 SO_EXT:0000243 denotes internal ribosome entry site
T2513 163-171 GO:0005840 denotes ribosome
T2514 184-188 SO_EXT:0000243 denotes IRES
T2515 190-195 NCBITaxon:9606 denotes human
T2516 196-205 UBERON:0001987 denotes placental
T2517 196-226 PR_EXT:000003969 denotes placental alkaline phosphatase
T2518 206-226 GO_PR_EXT:alkaline_phosphatase denotes alkaline phosphatase
T2519 228-233 PR_EXT:P05187 denotes hPLAP
T2520 244-261 GO:0006413 denotes translation start
T2521 244-266 SO_EXT:0000318 denotes translation start site
T2522 270-274 PR_EXT:000000281 denotes Gdf5

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T2331 3-12 NCBITaxon:2 denotes bacterial
T2332 3-34 SO:0000153 denotes bacterial artificial chromosome
T2333 36-39 SO:0000153 denotes BAC
T2334 56-60 PR:000000281 denotes Gdf5
T2335 111-119 NCBITaxon:2 denotes bacteria
T2336 132-140 SO:0005853 denotes cassette
T2337 154-182 SO:0000243 denotes internal ribosome entry site
T2338 163-171 GO:0005840 denotes ribosome
T2339 184-188 SO:0000243 denotes IRES
T2340 190-195 NCBITaxon:9606 denotes human
T2341 196-205 UBERON:0001987 denotes placental
T2342 196-226 PR:000003969 denotes placental alkaline phosphatase
T2343 228-233 PR:P05187 denotes hPLAP
T2344 244-261 GO:0006413 denotes translation start
T2345 244-266 SO:0000318 denotes translation start site
T2346 270-274 PR:000000281 denotes Gdf5