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PMC:523229 / 30624-30948 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T6606 0-324 sentence denotes Previous studies have shown that Sox9 is required for normal cartilage differentiation, for expression of cartilage extracellular matrix (ECM) genes including Agg, and is a direct transcriptional regulator of the key cartilage matrix gene Col2a1 (Bell et al. 1997; Lefebvre et al. 1997; Bi et al. 1999; Sekiya et al. 2000).
T6607 1-9 JJ denotes Previous
T6608 10-17 NNS denotes studies
T6609 23-28 VBN denotes shown
T6610 18-22 VBP denotes have
T6611 29-33 IN denotes that
T6612 42-50 VBN denotes required
T6613 34-38 NN denotes Sox9
T6614 39-41 VBZ denotes is
T6615 51-54 IN denotes for
T6616 55-61 JJ denotes normal
T6617 72-87 NN denotes differentiation
T6618 62-71 NN denotes cartilage
T6619 87-89 , denotes ,
T6620 89-92 IN denotes for
T6621 93-103 NN denotes expression
T6622 104-106 IN denotes of
T6623 107-116 NN denotes cartilage
T6624 131-137 NN denotes matrix
T6625 117-130 JJ denotes extracellular
T6626 144-149 NNS denotes genes
T6627 138-139 -LRB- denotes (
T6628 139-142 NN denotes ECM
T6629 142-143 -RRB- denotes )
T6630 150-159 VBG denotes including
T6631 160-163 NN denotes Agg
T6632 163-165 , denotes ,
T6633 165-168 CC denotes and
T6634 169-171 VBZ denotes is
T6635 172-173 DT denotes a
T6636 197-206 NN denotes regulator
T6637 174-180 JJ denotes direct
T6638 181-196 JJ denotes transcriptional
T6639 207-209 IN denotes of
T6640 210-213 DT denotes the
T6641 240-246 NN denotes Col2a1
T6642 214-217 JJ denotes key
T6643 218-227 NN denotes cartilage
T6644 228-234 NN denotes matrix
T6645 235-239 NN denotes gene
T6646 247-248 -LRB- denotes (
T6647 248-252 NNP denotes Bell
T6648 253-255 FW denotes et
T6649 256-259 FW denotes al.
T6650 260-264 CD denotes 1997
T6651 264-265 : denotes ;
T6652 266-274 NNP denotes Lefebvre
T6653 275-277 FW denotes et
T6654 278-281 FW denotes al.
T6655 282-286 CD denotes 1997
T6656 286-287 : denotes ;
T6657 288-290 NNP denotes Bi
T6658 291-293 FW denotes et
T6659 294-297 FW denotes al.
T6660 298-302 CD denotes 1999
T6661 302-303 : denotes ;
T6662 304-310 NNP denotes Sekiya
T6663 311-313 FW denotes et
T6664 314-317 FW denotes al.
T6665 318-322 CD denotes 2000
T6666 322-323 -RRB- denotes )
T6667 323-324 . denotes .
R4230 T6607 T6608 amod Previous,studies
R4231 T6608 T6609 nsubj studies,shown
R4232 T6610 T6609 aux have,shown
R4233 T6611 T6612 mark that,required
R4234 T6612 T6609 ccomp required,shown
R4235 T6613 T6612 nsubjpass Sox9,required
R4236 T6614 T6612 auxpass is,required
R4237 T6615 T6612 prep for,required
R4238 T6616 T6617 amod normal,differentiation
R4239 T6617 T6615 pobj differentiation,for
R4240 T6618 T6617 compound cartilage,differentiation
R4241 T6619 T6615 punct ", ",for
R4242 T6620 T6615 prep for,for
R4243 T6621 T6620 pobj expression,for
R4244 T6622 T6621 prep of,expression
R4245 T6623 T6624 nmod cartilage,matrix
R4246 T6624 T6626 nmod matrix,genes
R4247 T6625 T6624 amod extracellular,matrix
R4248 T6626 T6622 pobj genes,of
R4249 T6627 T6624 punct (,matrix
R4250 T6628 T6624 appos ECM,matrix
R4251 T6629 T6624 punct ),matrix
R4252 T6630 T6626 prep including,genes
R4253 T6631 T6630 pobj Agg,including
R4254 T6632 T6612 punct ", ",required
R4255 T6633 T6612 cc and,required
R4256 T6634 T6612 conj is,required
R4257 T6635 T6636 det a,regulator
R4258 T6636 T6634 attr regulator,is
R4259 T6637 T6636 amod direct,regulator
R4260 T6638 T6636 amod transcriptional,regulator
R4261 T6639 T6636 prep of,regulator
R4262 T6640 T6641 det the,Col2a1
R4263 T6641 T6639 pobj Col2a1,of
R4264 T6642 T6641 amod key,Col2a1
R4265 T6643 T6644 compound cartilage,matrix
R4266 T6644 T6641 compound matrix,Col2a1
R4267 T6645 T6641 compound gene,Col2a1
R4268 T6646 T6647 punct (,Bell
R4269 T6647 T6634 meta Bell,is
R4270 T6648 T6647 nmod et,Bell
R4271 T6649 T6647 nmod al.,Bell
R4272 T6650 T6647 nummod 1997,Bell
R4273 T6651 T6647 punct ;,Bell
R4274 T6652 T6647 nmod Lefebvre,Bell
R4275 T6653 T6647 nmod et,Bell
R4276 T6654 T6647 nmod al.,Bell
R4277 T6655 T6647 nummod 1997,Bell
R4278 T6656 T6647 punct ;,Bell
R4279 T6657 T6647 nmod Bi,Bell
R4280 T6658 T6647 nmod et,Bell
R4281 T6659 T6647 nmod al.,Bell
R4282 T6660 T6647 nummod 1999,Bell
R4283 T6661 T6647 punct ;,Bell
R4284 T6662 T6647 nmod Sekiya,Bell
R4285 T6663 T6647 nmod et,Bell
R4286 T6664 T6647 nmod al.,Bell
R4287 T6665 T6647 nummod 2000,Bell
R4288 T6666 T6647 punct ),Bell
R4289 T6667 T6609 punct .,shown

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5857 34-38 PR_EXT:000015435 denotes Sox9
T5858 62-71 UBERON_EXT:cartilage_element_or_tissue denotes cartilage
T5859 72-87 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T5860 93-103 GO:0010467 denotes expression
T5861 107-116 UBERON_EXT:cartilage_element_or_tissue denotes cartilage
T5862 117-137 GO:0031012 denotes extracellular matrix
T5863 122-130 CL_GO_EXT:cell denotes cellular
T5864 139-142 GO:0031012 denotes ECM
T5865 144-149 SO_EXT:0000704 denotes genes
T5866 160-163 PR_EXT:000003606 denotes Agg
T5867 181-196 GO_EXT:transcription denotes transcriptional
T5868 197-206 GO_EXT:regulator denotes regulator
T5869 218-227 UBERON_EXT:cartilage_element_or_tissue denotes cartilage
T5870 228-234 GO:0031012 denotes matrix
T5871 235-239 SO_EXT:0000704 denotes gene
T5872 240-246 PR_EXT:000003266 denotes Col2a1

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5674 34-38 PR:000015435 denotes Sox9
T5675 93-103 GO:0010467 denotes expression
T5676 117-137 GO:0031012 denotes extracellular matrix
T5677 139-142 GO:0031012 denotes ECM
T5678 144-149 SO:0000704 denotes genes
T5679 160-163 PR:000003606 denotes Agg
T5680 228-234 GO:0031012 denotes matrix
T5681 235-239 SO:0000704 denotes gene
T5682 240-246 PR:000003266 denotes Col2a1

2_test

Id Subject Object Predicate Lexical cue
15492776-9171829-84887319 260-264 9171829 denotes 1997
15492776-9121483-84887320 282-286 9121483 denotes 1997
15492776-10319868-84887321 298-302 10319868 denotes 1999
15492776-10753864-84887322 318-322 10753864 denotes 2000
T18583 260-264 9171829 denotes 1997
T21111 282-286 9121483 denotes 1997
T83716 298-302 10319868 denotes 1999
T61024 318-322 10753864 denotes 2000