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The fold increase of induction of each gene is shown.\n(B) Total genomic DNA (10 μg/lane) prepared from gastrocnemius muscle was digested with Nco1 and subjected to Southern analysis with COXII (mitochondrial genome–encoded) and MCIP1 (nuclear genome–encoded) DNA probes.\n(C) Equal amounts of gastrocnemius muscle were collected from both transgenic mice and control littermates. Total mitochondrial DNA was isolated and separated on 1% agarose gel. The relative abundance of mitochondrial DNA in transgenic and wild-type mice is presented.\n(D) Western blot analysis of muscle fiber markers and mitochondrial components. Each lane was loaded with 80 μg of total gastrocnemius muscle extracts.\n(E) Wild-type C57B6 mice were treated with vehicle or PPARδ agonist GW501516 for 10 d. Total RNA (10 μg/lane) prepared from the gastrocnemius muscle was probed with indicated probes."}

    craft-ca-core-ex-dev

    {"project":"craft-ca-core-ex-dev","denotations":[{"id":"T4951","span":{"begin":14,"end":19},"obj":"PR_EXT:000013057"},{"id":"T4952","span":{"begin":28,"end":33},"obj":"SO_EXT:0000704"},{"id":"T4953","span":{"begin":46,"end":59},"obj":"CL:0002211"},{"id":"T4954","span":{"begin":73,"end":86},"obj":"GO:0005739"},{"id":"T4955","span":{"begin":87,"end":97},"obj":"GO_EXT:biogenesis_or_biosynthesis"},{"id":"T4956","span":{"begin":108,"end":111},"obj":"CHEBI_SO_EXT:RNA"},{"id":"T4957","span":{"begin":139,"end":159},"obj":"UBERON:0001388"},{"id":"T4958","span":{"begin":163,"end":173},"obj":"SO_EXT:transgenic_entity"},{"id":"T4959","span":{"begin":175,"end":177},"obj":"SO_EXT:transgenic_entity"},{"id":"T4960","span":{"begin":183,"end":192},"obj":"SO_EXT:wild_type_entity_or_quality"},{"id":"T4961","span":{"begin":194,"end":196},"obj":"SO_EXT:wild_type_entity_or_quality"},{"id":"T4962","span":{"begin":236,"end":242},"obj":"CHEBI_SO_EXT:molecular_probe"},{"id":"T4963","span":{"begin":283,"end":287},"obj":"SO_EXT:0000704"},{"id":"T4964","span":{"begin":308,"end":319},"obj":"SO_EXT:genomic_DNA"},{"id":"T4965","span":{"begin":316,"end":319},"obj":"CHEBI_SO_EXT:DNA"},{"id":"T4966","span":{"begin":347,"end":367},"obj":"UBERON:0001388"},{"id":"T4967","span":{"begin":431,"end":436},"obj":"PR_EXT:000025365"},{"id":"T4968","span":{"begin":438,"end":451},"obj":"GO:0005739"},{"id":"T4969","span":{"begin":452,"end":458},"obj":"SO_EXT:0001026"},{"id":"T4970","span":{"begin":459,"end":466},"obj":"SO_EXT:sequence_coding_function"},{"id":"T4971","span":{"begin":472,"end":477},"obj":"PR_EXT:000013829"},{"id":"T4972","span":{"begin":479,"end":486},"obj":"GO:0005634"},{"id":"T4973","span":{"begin":487,"end":493},"obj":"SO_EXT:0001026"},{"id":"T4974","span":{"begin":494,"end":501},"obj":"SO_EXT:sequence_coding_function"},{"id":"T4975","span":{"begin":503,"end":506},"obj":"CHEBI_SO_EXT:DNA"},{"id":"T4976","span":{"begin":507,"end":513},"obj":"CHEBI_SO_EXT:molecular_probe"},{"id":"T4977","span":{"begin":536,"end":556},"obj":"UBERON:0001388"},{"id":"T4978","span":{"begin":582,"end":592},"obj":"SO_EXT:transgenic_entity"},{"id":"T4979","span":{"begin":593,"end":597},"obj":"NCBITaxon:10088"},{"id":"T4980","span":{"begin":629,"end":642},"obj":"GO:0005739"},{"id":"T4981","span":{"begin":629,"end":646},"obj":"SO:0001032"},{"id":"T4982","span":{"begin":643,"end":646},"obj":"CHEBI_SO_EXT:DNA"},{"id":"T4983","span":{"begin":680,"end":687},"obj":"CHEBI:2511"},{"id":"T4984","span":{"begin":719,"end":732},"obj":"GO:0005739"},{"id":"T4985","span":{"begin":719,"end":736},"obj":"SO:0001032"},{"id":"T4986","span":{"begin":733,"end":736},"obj":"CHEBI_SO_EXT:DNA"},{"id":"T4987","span":{"begin":740,"end":750},"obj":"SO_EXT:transgenic_entity"},{"id":"T4988","span":{"begin":755,"end":764},"obj":"SO_EXT:wild_type_entity_or_quality"},{"id":"T4989","span":{"begin":765,"end":769},"obj":"NCBITaxon:10088"},{"id":"T4990","span":{"begin":813,"end":819},"obj":"UBERON_EXT:muscle_structure_or_tissue"},{"id":"T4991","span":{"begin":813,"end":825},"obj":"CL:0000187"},{"id":"T4992","span":{"begin":826,"end":833},"obj":"CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag"},{"id":"T4993","span":{"begin":838,"end":851},"obj":"GO:0005739"},{"id":"T4994","span":{"begin":905,"end":925},"obj":"UBERON:0001388"},{"id":"T4995","span":{"begin":940,"end":949},"obj":"SO_EXT:wild_type_entity_or_quality"},{"id":"T4996","span":{"begin":956,"end":960},"obj":"NCBITaxon:10088"},{"id":"T4997","span":{"begin":990,"end":995},"obj":"PR_EXT:000013057"},{"id":"T4998","span":{"begin":990,"end":1003},"obj":"CHEBI_EXT:73730"},{"id":"T4999","span":{"begin":996,"end":1003},"obj":"CHEBI_GO_EXT:agonist"},{"id":"T5000","span":{"begin":1004,"end":1012},"obj":"CHEBI:73726"},{"id":"T5001","span":{"begin":1029,"end":1032},"obj":"CHEBI_SO_EXT:RNA"},{"id":"T5002","span":{"begin":1064,"end":1084},"obj":"UBERON:0001388"},{"id":"T5003","span":{"begin":1111,"end":1117},"obj":"CHEBI_SO_EXT:molecular_probe"}],"text":"Activation of PPARδ Induces Genes Typical for Type I Fibers and Promotes Mitochondrial Biogenesis\n(A) Total RNA (10 μg/lane) prepared from gastrocnemius muscle of transgenic (TG) and wild-type (WT) littermates was probed with indicated probes. The fold increase of induction of each gene is shown.\n(B) Total genomic DNA (10 μg/lane) prepared from gastrocnemius muscle was digested with Nco1 and subjected to Southern analysis with COXII (mitochondrial genome–encoded) and MCIP1 (nuclear genome–encoded) DNA probes.\n(C) Equal amounts of gastrocnemius muscle were collected from both transgenic mice and control littermates. Total mitochondrial DNA was isolated and separated on 1% agarose gel. The relative abundance of mitochondrial DNA in transgenic and wild-type mice is presented.\n(D) Western blot analysis of muscle fiber markers and mitochondrial components. Each lane was loaded with 80 μg of total gastrocnemius muscle extracts.\n(E) Wild-type C57B6 mice were treated with vehicle or PPARδ agonist GW501516 for 10 d. Total RNA (10 μg/lane) prepared from the gastrocnemius muscle was probed with indicated probes."}

    craft-ca-core-dev

    {"project":"craft-ca-core-dev","denotations":[{"id":"T5004","span":{"begin":14,"end":19},"obj":"PR:000013057"},{"id":"T5005","span":{"begin":28,"end":33},"obj":"SO:0000704"},{"id":"T5006","span":{"begin":46,"end":59},"obj":"CL:0002211"},{"id":"T5007","span":{"begin":73,"end":86},"obj":"GO:0005739"},{"id":"T5008","span":{"begin":139,"end":159},"obj":"UBERON:0001388"},{"id":"T5009","span":{"begin":283,"end":287},"obj":"SO:0000704"},{"id":"T5010","span":{"begin":308,"end":315},"obj":"SO:0001026"},{"id":"T5011","span":{"begin":347,"end":367},"obj":"UBERON:0001388"},{"id":"T5012","span":{"begin":431,"end":436},"obj":"PR:000025365"},{"id":"T5013","span":{"begin":438,"end":451},"obj":"GO:0005739"},{"id":"T5014","span":{"begin":452,"end":458},"obj":"SO:0001026"},{"id":"T5015","span":{"begin":472,"end":477},"obj":"PR:000013829"},{"id":"T5016","span":{"begin":479,"end":486},"obj":"GO:0005634"},{"id":"T5017","span":{"begin":487,"end":493},"obj":"SO:0001026"},{"id":"T5018","span":{"begin":536,"end":556},"obj":"UBERON:0001388"},{"id":"T5019","span":{"begin":593,"end":597},"obj":"NCBITaxon:10088"},{"id":"T5020","span":{"begin":629,"end":642},"obj":"GO:0005739"},{"id":"T5021","span":{"begin":629,"end":646},"obj":"SO:0001032"},{"id":"T5022","span":{"begin":680,"end":687},"obj":"CHEBI:2511"},{"id":"T5023","span":{"begin":719,"end":732},"obj":"GO:0005739"},{"id":"T5024","span":{"begin":719,"end":736},"obj":"SO:0001032"},{"id":"T5025","span":{"begin":765,"end":769},"obj":"NCBITaxon:10088"},{"id":"T5026","span":{"begin":813,"end":825},"obj":"CL:0000187"},{"id":"T5027","span":{"begin":838,"end":851},"obj":"GO:0005739"},{"id":"T5028","span":{"begin":905,"end":925},"obj":"UBERON:0001388"},{"id":"T5029","span":{"begin":956,"end":960},"obj":"NCBITaxon:10088"},{"id":"T5030","span":{"begin":990,"end":995},"obj":"PR:000013057"},{"id":"T5031","span":{"begin":990,"end":1003},"obj":"CHEBI:73730"},{"id":"T5032","span":{"begin":1004,"end":1012},"obj":"CHEBI:73726"},{"id":"T5033","span":{"begin":1064,"end":1084},"obj":"UBERON:0001388"}],"text":"Activation of PPARδ Induces Genes Typical for Type I Fibers and Promotes Mitochondrial Biogenesis\n(A) Total RNA (10 μg/lane) prepared from gastrocnemius muscle of transgenic (TG) and wild-type (WT) littermates was probed with indicated probes. The fold increase of induction of each gene is shown.\n(B) Total genomic DNA (10 μg/lane) prepared from gastrocnemius muscle was digested with Nco1 and subjected to Southern analysis with COXII (mitochondrial genome–encoded) and MCIP1 (nuclear genome–encoded) DNA probes.\n(C) Equal amounts of gastrocnemius muscle were collected from both transgenic mice and control littermates. Total mitochondrial DNA was isolated and separated on 1% agarose gel. The relative abundance of mitochondrial DNA in transgenic and wild-type mice is presented.\n(D) Western blot analysis of muscle fiber markers and mitochondrial components. Each lane was loaded with 80 μg of total gastrocnemius muscle extracts.\n(E) Wild-type C57B6 mice were treated with vehicle or PPARδ agonist GW501516 for 10 d. Total RNA (10 μg/lane) prepared from the gastrocnemius muscle was probed with indicated probes."}