PMC:4573573 / 18634-19743
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/4573573","sourcedb":"PMC","sourceid":"4573573","source_url":"https://www.ncbi.nlm.nih.gov/pmc/4573573","text":"3.1. Stage 1\nIn order to demonstrate the proposed analysis pipelines, this section presents results in cervix cancer previously published in [3]. The database used for this study was introduced in [9] and contained 8 healthy tissues and 25 cervical cancer tissues, all of them with expression level readings for 10,692 genes from a cDNA microarray. The list of 28 potential biomarkers after applying DEA is shown in Table 1. The genes in this list were cross validated for agreement in the direction of expression change in an independent database associated to [10]. As described previously, these genes were extracted from the first 10 frontiers of the analysis. The role of the selected genes in cancer was previously discussed in a previous publication of our group [3]. The fourth column of Table 1 summarizes the types of cancer that where the particular genes were found to be involved following such results.\nmicroarrays-04-00287-t001_Table 1 Table 1 List 28 genes found through DEA as being differentially expressed in cervix cancer and cross validated for the direction of expression change [3].\n\n3","divisions":[{"label":"Title","span":{"begin":0,"end":12}},{"label":"Table caption","span":{"begin":917,"end":1108}}],"tracks":[{"project":"2_test","denotations":[{"id":"26388997-23634293-69475719","span":{"begin":142,"end":143},"obj":"23634293"},{"id":"26388997-23634293-69475719","span":{"begin":142,"end":143},"obj":"23634293"},{"id":"26388997-17974957-69475720","span":{"begin":198,"end":199},"obj":"17974957"},{"id":"26388997-17974957-69475720","span":{"begin":198,"end":199},"obj":"17974957"},{"id":"26388997-23634293-69475721","span":{"begin":771,"end":772},"obj":"23634293"},{"id":"26388997-23634293-69475721","span":{"begin":771,"end":772},"obj":"23634293"},{"id":"T78975","span":{"begin":142,"end":143},"obj":"23634293"},{"id":"T23124","span":{"begin":142,"end":143},"obj":"23634293"},{"id":"T15400","span":{"begin":198,"end":199},"obj":"17974957"},{"id":"T35517","span":{"begin":198,"end":199},"obj":"17974957"},{"id":"T82801","span":{"begin":771,"end":772},"obj":"23634293"},{"id":"T80401","span":{"begin":771,"end":772},"obj":"23634293"},{"id":"26388997-23634293-69475722","span":{"begin":1103,"end":1104},"obj":"23634293"},{"id":"26388997-23634293-69475722","span":{"begin":1103,"end":1104},"obj":"23634293"}],"attributes":[{"subj":"26388997-23634293-69475719","pred":"source","obj":"2_test"},{"subj":"26388997-23634293-69475719","pred":"source","obj":"2_test"},{"subj":"26388997-17974957-69475720","pred":"source","obj":"2_test"},{"subj":"26388997-17974957-69475720","pred":"source","obj":"2_test"},{"subj":"26388997-23634293-69475721","pred":"source","obj":"2_test"},{"subj":"26388997-23634293-69475721","pred":"source","obj":"2_test"},{"subj":"T78975","pred":"source","obj":"2_test"},{"subj":"T23124","pred":"source","obj":"2_test"},{"subj":"T15400","pred":"source","obj":"2_test"},{"subj":"T35517","pred":"source","obj":"2_test"},{"subj":"T82801","pred":"source","obj":"2_test"},{"subj":"T80401","pred":"source","obj":"2_test"},{"subj":"26388997-23634293-69475722","pred":"source","obj":"2_test"},{"subj":"26388997-23634293-69475722","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"2_test","color":"#ecd393","default":true}]}]}}