PMC:4502369 / 10274-10991 JSONTXT

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/4502369","sourcedb":"PMC","sourceid":"4502369","source_url":"https://www.ncbi.nlm.nih.gov/pmc/4502369","text":"Gene classification was performed with the Panther (Protein ANalysis THrough Evolutionary Relationships) classification system (Mi et al. 2005; Thomas et al. 2003). GO enrichment analyses of the Cufflinks results were performed using AgriGO (Du et al. 2010) and GOrilla (Eden et al. 2009). AgriGO accepted only protein IDs, which limited the power of the analysis due to a low number of identified genes with the correct ID. Thus, the knowledge of human gene function was exploited for the identification of enriched biological processes and classification analysis. For human genes, the list of all Ensembl annotated genes was used as the reference list. Associated gene names were obtained for pig genes by Biomart.","tracks":[{"project":"2_test","denotations":[{"id":"25917919-15608197-43377636","span":{"begin":138,"end":142},"obj":"15608197"},{"id":"25917919-12952881-43377637","span":{"begin":158,"end":162},"obj":"12952881"},{"id":"25917919-20435677-43377638","span":{"begin":252,"end":256},"obj":"20435677"},{"id":"25917919-19192299-43377639","span":{"begin":283,"end":287},"obj":"19192299"}],"attributes":[{"subj":"25917919-15608197-43377636","pred":"source","obj":"2_test"},{"subj":"25917919-12952881-43377637","pred":"source","obj":"2_test"},{"subj":"25917919-20435677-43377638","pred":"source","obj":"2_test"},{"subj":"25917919-19192299-43377639","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"2_test","color":"#93ecc2","default":true}]}]}}