
PMC:441373 / 7285-7724
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1938 | 0-439 | sentence | denotes | Thus, if the TACC genes were duplicated at both events, we would expect to identify four TACC genes in the most "primitive" compact vertebrate genome sequenced to date, the pufferfish Takifugu rubripes, with three genes corresponding to the human TACC1-3, and, in keeping with the proposed model for genomic duplication of the chromosomal loci for the TACC genes (discussed below), a possible fourth gene deriving from the TACC3 ancestor. |
T1939 | 1-5 | RB | denotes | Thus |
T1940 | 66-72 | VB | denotes | expect |
T1941 | 5-7 | , | denotes | , |
T1942 | 7-9 | IN | denotes | if |
T1943 | 30-40 | VBN | denotes | duplicated |
T1944 | 10-13 | DT | denotes | the |
T1945 | 19-24 | NNS | denotes | genes |
T1946 | 14-18 | NN | denotes | TACC |
T1947 | 25-29 | VBD | denotes | were |
T1948 | 41-43 | IN | denotes | at |
T1949 | 44-48 | DT | denotes | both |
T1950 | 49-55 | NNS | denotes | events |
T1951 | 55-57 | , | denotes | , |
T1952 | 57-59 | PRP | denotes | we |
T1953 | 60-65 | MD | denotes | would |
T1954 | 73-75 | TO | denotes | to |
T1955 | 76-84 | VB | denotes | identify |
T1956 | 85-89 | CD | denotes | four |
T1957 | 95-100 | NNS | denotes | genes |
T1958 | 90-94 | NN | denotes | TACC |
T1959 | 101-103 | IN | denotes | in |
T1960 | 104-107 | DT | denotes | the |
T1961 | 144-150 | NN | denotes | genome |
T1962 | 108-112 | JJS | denotes | most |
T1963 | 114-123 | JJ | denotes | primitive |
T1964 | 113-114 | `` | denotes | " |
T1965 | 123-124 | '' | denotes | " |
T1966 | 125-132 | JJ | denotes | compact |
T1967 | 133-143 | NN | denotes | vertebrate |
T1968 | 151-160 | VBN | denotes | sequenced |
T1969 | 161-163 | IN | denotes | to |
T1970 | 164-168 | NN | denotes | date |
T1971 | 168-170 | , | denotes | , |
T1972 | 170-173 | DT | denotes | the |
T1973 | 174-184 | NN | denotes | pufferfish |
T1974 | 185-193 | NNP | denotes | Takifugu |
T1975 | 194-202 | NNP | denotes | rubripes |
T1976 | 202-204 | , | denotes | , |
T1977 | 204-208 | IN | denotes | with |
T1978 | 209-214 | CD | denotes | three |
T1979 | 215-220 | NNS | denotes | genes |
T1980 | 221-234 | VBG | denotes | corresponding |
T1981 | 235-237 | IN | denotes | to |
T1982 | 238-241 | DT | denotes | the |
T1983 | 248-253 | NN | denotes | TACC1 |
T1984 | 242-247 | JJ | denotes | human |
T1985 | 253-254 | HYPH | denotes | - |
T1986 | 254-255 | CD | denotes | 3 |
T1987 | 255-257 | , | denotes | , |
T1988 | 257-260 | CC | denotes | and |
T1989 | 260-262 | , | denotes | , |
T1990 | 262-264 | IN | denotes | in |
T1991 | 401-405 | NN | denotes | gene |
T1992 | 265-272 | VBG | denotes | keeping |
T1993 | 273-277 | IN | denotes | with |
T1994 | 278-281 | DT | denotes | the |
T1995 | 291-296 | NN | denotes | model |
T1996 | 282-290 | VBN | denotes | proposed |
T1997 | 297-300 | IN | denotes | for |
T1998 | 301-308 | JJ | denotes | genomic |
T1999 | 309-320 | NN | denotes | duplication |
T2000 | 321-323 | IN | denotes | of |
T2001 | 324-327 | DT | denotes | the |
T2002 | 340-344 | NNS | denotes | loci |
T2003 | 328-339 | JJ | denotes | chromosomal |
T2004 | 345-348 | IN | denotes | for |
T2005 | 349-352 | DT | denotes | the |
T2006 | 358-363 | NNS | denotes | genes |
T2007 | 353-357 | NN | denotes | TACC |
T2008 | 364-365 | -LRB- | denotes | ( |
T2009 | 365-374 | VBN | denotes | discussed |
T2010 | 375-380 | RB | denotes | below |
T2011 | 380-381 | -RRB- | denotes | ) |
T2012 | 381-383 | , | denotes | , |
T2013 | 383-384 | DT | denotes | a |
T2014 | 385-393 | JJ | denotes | possible |
T2015 | 394-400 | JJ | denotes | fourth |
T2016 | 406-414 | VBG | denotes | deriving |
T2017 | 415-419 | IN | denotes | from |
T2018 | 420-423 | DT | denotes | the |
T2019 | 430-438 | NN | denotes | ancestor |
T2020 | 424-429 | NN | denotes | TACC3 |
T2021 | 438-439 | . | denotes | . |
R1114 | T1939 | T1940 | advmod | Thus,expect |
R1115 | T1941 | T1940 | punct | ", ",expect |
R1116 | T1942 | T1943 | mark | if,duplicated |
R1117 | T1943 | T1940 | advcl | duplicated,expect |
R1118 | T1944 | T1945 | det | the,genes |
R1119 | T1945 | T1943 | nsubjpass | genes,duplicated |
R1120 | T1946 | T1945 | compound | TACC,genes |
R1121 | T1947 | T1943 | auxpass | were,duplicated |
R1122 | T1948 | T1943 | prep | at,duplicated |
R1123 | T1949 | T1950 | det | both,events |
R1124 | T1950 | T1948 | pobj | events,at |
R1125 | T1951 | T1940 | punct | ", ",expect |
R1126 | T1952 | T1940 | nsubj | we,expect |
R1127 | T1953 | T1940 | aux | would,expect |
R1128 | T1954 | T1955 | aux | to,identify |
R1129 | T1955 | T1940 | xcomp | identify,expect |
R1130 | T1956 | T1957 | nummod | four,genes |
R1131 | T1957 | T1955 | dobj | genes,identify |
R1132 | T1958 | T1957 | compound | TACC,genes |
R1133 | T1959 | T1955 | prep | in,identify |
R1134 | T1960 | T1961 | det | the,genome |
R1135 | T1961 | T1959 | pobj | genome,in |
R1136 | T1962 | T1963 | amod | most,primitive |
R1137 | T1963 | T1961 | amod | primitive,genome |
R1138 | T1964 | T1963 | punct | """",primitive |
R1139 | T1965 | T1963 | punct | """",primitive |
R1140 | T1966 | T1961 | amod | compact,genome |
R1141 | T1967 | T1961 | compound | vertebrate,genome |
R1142 | T1968 | T1961 | acl | sequenced,genome |
R1143 | T1969 | T1961 | prep | to,genome |
R1144 | T1970 | T1969 | pobj | date,to |
R1145 | T1971 | T1961 | punct | ", ",genome |
R1146 | T1972 | T1973 | det | the,pufferfish |
R1147 | T1973 | T1961 | appos | pufferfish,genome |
R1148 | T1974 | T1975 | compound | Takifugu,rubripes |
R1149 | T1975 | T1973 | appos | rubripes,pufferfish |
R1150 | T1976 | T1973 | punct | ", ",pufferfish |
R1151 | T1977 | T1973 | prep | with,pufferfish |
R1152 | T1978 | T1979 | nummod | three,genes |
R1153 | T1979 | T1977 | pobj | genes,with |
R1154 | T1980 | T1979 | acl | corresponding,genes |
R1155 | T1981 | T1980 | prep | to,corresponding |
R1156 | T1982 | T1983 | det | the,TACC1 |
R1157 | T1983 | T1981 | pobj | TACC1,to |
R1158 | T1984 | T1983 | amod | human,TACC1 |
R1159 | T1985 | T1983 | punct | -,TACC1 |
R1160 | T1986 | T1983 | nummod | 3,TACC1 |
R1161 | T1987 | T1979 | punct | ", ",genes |
R1162 | T1988 | T1979 | cc | and,genes |
R1163 | T1989 | T1979 | punct | ", ",genes |
R1164 | T1990 | T1991 | prep | in,gene |
R1165 | T1991 | T1979 | conj | gene,genes |
R1166 | T1992 | T1990 | pobj | keeping,in |
R1167 | T1993 | T1992 | prep | with,keeping |
R1168 | T1994 | T1995 | det | the,model |
R1169 | T1995 | T1993 | pobj | model,with |
R1170 | T1996 | T1995 | amod | proposed,model |
R1171 | T1997 | T1995 | prep | for,model |
R1172 | T1998 | T1999 | amod | genomic,duplication |
R1173 | T1999 | T1997 | pobj | duplication,for |
R1174 | T2000 | T1999 | prep | of,duplication |
R1175 | T2001 | T2002 | det | the,loci |
R1176 | T2002 | T2000 | pobj | loci,of |
R1177 | T2003 | T2002 | amod | chromosomal,loci |
R1178 | T2004 | T1995 | prep | for,model |
R1179 | T2005 | T2006 | det | the,genes |
R1180 | T2006 | T2004 | pobj | genes,for |
R1181 | T2007 | T2006 | compound | TACC,genes |
R1182 | T2008 | T2009 | punct | (,discussed |
R1183 | T2009 | T1995 | parataxis | discussed,model |
R1184 | T2010 | T2009 | advmod | below,discussed |
R1185 | T2011 | T2009 | punct | ),discussed |
R1186 | T2012 | T1991 | punct | ", ",gene |
R1187 | T2013 | T1991 | det | a,gene |
R1188 | T2014 | T1991 | amod | possible,gene |
R1189 | T2015 | T1991 | amod | fourth,gene |
R1190 | T2016 | T1991 | acl | deriving,gene |
R1191 | T2017 | T2016 | prep | from,deriving |
R1192 | T2018 | T2019 | det | the,ancestor |
R1193 | T2019 | T2017 | pobj | ancestor,from |
R1194 | T2020 | T2019 | compound | TACC3,ancestor |
R1195 | T2021 | T1940 | punct | .,expect |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1493 | 19-24 | SO_EXT:0000704 | denotes | genes |
T1494 | 30-40 | SO_EXT:sequence_duplication_process | denotes | duplicated |
T1495 | 95-100 | SO_EXT:0000704 | denotes | genes |
T1496 | 133-143 | NCBITaxon:7742 | denotes | vertebrate |
T1497 | 144-150 | SO_EXT:0001026 | denotes | genome |
T1498 | 174-184 | NCBITaxon:31031 | denotes | pufferfish |
T1499 | 185-202 | NCBITaxon:31033 | denotes | Takifugu rubripes |
T1500 | 215-220 | SO_EXT:0000704 | denotes | genes |
T1501 | 242-247 | NCBITaxon:9606 | denotes | human |
T1502 | 248-253 | PR_EXT:000016006 | denotes | TACC1 |
T1503 | 301-308 | SO_EXT:0001026 | denotes | genomic |
T1504 | 309-320 | SO_EXT:sequence_duplication_entity_or_process | denotes | duplication |
T1505 | 328-344 | GO_SO_EXT:chromosomal_part_or_position_or_region_or_site | denotes | chromosomal loci |
T1506 | 358-363 | SO_EXT:0000704 | denotes | genes |
T1507 | 401-405 | SO_EXT:0000704 | denotes | gene |
T1508 | 424-429 | PR_EXT:000016008 | denotes | TACC3 |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1361 | 19-24 | SO:0000704 | denotes | genes |
T1362 | 95-100 | SO:0000704 | denotes | genes |
T1363 | 133-143 | NCBITaxon:7742 | denotes | vertebrate |
T1364 | 144-150 | SO:0001026 | denotes | genome |
T1365 | 174-184 | NCBITaxon:31031 | denotes | pufferfish |
T1366 | 185-202 | NCBITaxon:31033 | denotes | Takifugu rubripes |
T1367 | 215-220 | SO:0000704 | denotes | genes |
T1368 | 242-247 | NCBITaxon:9606 | denotes | human |
T1369 | 248-253 | PR:000016006 | denotes | TACC1 |
T1370 | 301-308 | SO:0001026 | denotes | genomic |
T1371 | 358-363 | SO:0000704 | denotes | genes |
T1372 | 401-405 | SO:0000704 | denotes | gene |
T1373 | 424-429 | PR:000016008 | denotes | TACC3 |