Id |
Subject |
Object |
Predicate |
Lexical cue |
T1811 |
0-7 |
sentence |
denotes |
At the |
T1851 |
111-116 |
NNP |
denotes |
Ciona |
T1852 |
117-129 |
NNP |
denotes |
intestinalis |
T1853 |
130-131 |
-LRB- |
denotes |
[ |
T1854 |
131-133 |
CD |
denotes |
11 |
T1855 |
133-134 |
-RRB- |
denotes |
] |
T1856 |
134-136 |
, |
denotes |
, |
T1857 |
136-139 |
CC |
denotes |
and |
T1858 |
140-141 |
DT |
denotes |
a |
T1859 |
155-163 |
NN |
denotes |
sequence |
T1860 |
142-149 |
JJ |
denotes |
partial |
T1861 |
150-154 |
NN |
denotes |
TACC |
T1862 |
164-168 |
IN |
denotes |
from |
T1863 |
169-171 |
DT |
denotes |
an |
T1864 |
172-180 |
NN |
denotes |
analysis |
T1865 |
181-183 |
IN |
denotes |
of |
T1866 |
184-187 |
DT |
denotes |
the |
T1867 |
212-220 |
NN |
denotes |
database |
T1868 |
188-199 |
NNP |
denotes |
Halocynthia |
T1869 |
200-207 |
NNP |
denotes |
rortezi |
T1870 |
208-211 |
NN |
denotes |
EST |
T1871 |
221-222 |
-LRB- |
denotes |
[ |
T1872 |
222-224 |
CD |
denotes |
12 |
T1873 |
224-225 |
-RRB- |
denotes |
] |
T1874 |
225-226 |
. |
denotes |
. |
T1875 |
226-326 |
sentence |
denotes |
This confirms the original assumption that a single TACC gene was present in the chordate ancestor. |
T1876 |
227-231 |
DT |
denotes |
This |
T1877 |
232-240 |
VBZ |
denotes |
confirms |
T1878 |
241-244 |
DT |
denotes |
the |
T1879 |
254-264 |
NN |
denotes |
assumption |
T1880 |
245-253 |
JJ |
denotes |
original |
T1881 |
265-269 |
IN |
denotes |
that |
T1882 |
289-292 |
VBD |
denotes |
was |
T1883 |
270-271 |
DT |
denotes |
a |
T1884 |
284-288 |
NN |
denotes |
gene |
T1885 |
272-278 |
JJ |
denotes |
single |
T1886 |
279-283 |
NN |
denotes |
TACC |
T1887 |
293-300 |
JJ |
denotes |
present |
T1888 |
301-303 |
IN |
denotes |
in |
T1889 |
304-307 |
DT |
denotes |
the |
T1890 |
317-325 |
NN |
denotes |
ancestor |
T1891 |
308-316 |
NN |
denotes |
chordate |
T1892 |
325-326 |
. |
denotes |
. |
T1893 |
326-566 |
sentence |
denotes |
The next major event in the evolution of the chordate genome has been suggested to have occurred 687 ± 155.7 million years ago (MYA), with the first duplication of the chordate genome, and a second duplication occurring shortly thereafter. |
T1894 |
327-330 |
DT |
denotes |
The |
T1895 |
342-347 |
NN |
denotes |
event |
T1896 |
331-335 |
JJ |
denotes |
next |
T1897 |
336-341 |
JJ |
denotes |
major |
T1898 |
397-406 |
VBN |
denotes |
suggested |
T1899 |
348-350 |
IN |
denotes |
in |
T1900 |
351-354 |
DT |
denotes |
the |
T1901 |
355-364 |
NN |
denotes |
evolution |
T1902 |
365-367 |
IN |
denotes |
of |
T1903 |
368-371 |
DT |
denotes |
the |
T1904 |
381-387 |
NN |
denotes |
genome |
T1905 |
372-380 |
NN |
denotes |
chordate |
T1906 |
388-391 |
VBZ |
denotes |
has |
T1907 |
392-396 |
VBN |
denotes |
been |
T1908 |
407-409 |
TO |
denotes |
to |
T1909 |
415-423 |
VBN |
denotes |
occurred |
T1910 |
410-414 |
VB |
denotes |
have |
T1911 |
424-427 |
CD |
denotes |
687 |
T1912 |
430-435 |
CD |
denotes |
155.7 |
T1913 |
428-429 |
SYM |
denotes |
± |
T1914 |
444-449 |
NNS |
denotes |
years |
T1915 |
436-443 |
CD |
denotes |
million |
T1916 |
450-453 |
RB |
denotes |
ago |
T1917 |
454-455 |
-LRB- |
denotes |
( |
T1918 |
455-458 |
RB |
denotes |
MYA |
T1919 |
458-459 |
-RRB- |
denotes |
) |
T1920 |
459-461 |
, |
denotes |
, |
T1921 |
461-465 |
IN |
denotes |
with |
T1922 |
466-469 |
DT |
denotes |
the |
T1923 |
476-487 |
NN |
denotes |
duplication |
T1924 |
470-475 |
JJ |
denotes |
first |
T1925 |
488-490 |
IN |
denotes |
of |
T1926 |
491-494 |
DT |
denotes |
the |
T1927 |
504-510 |
NN |
denotes |
genome |
T1928 |
495-503 |
NN |
denotes |
chordate |
T1929 |
510-512 |
, |
denotes |
, |
T1930 |
512-515 |
CC |
denotes |
and |
T1931 |
516-517 |
DT |
denotes |
a |
T1932 |
525-536 |
NN |
denotes |
duplication |
T1933 |
518-524 |
JJ |
denotes |
second |
T1934 |
537-546 |
VBG |
denotes |
occurring |
T1935 |
547-554 |
RB |
denotes |
shortly |
T1936 |
555-565 |
RB |
denotes |
thereafter |
T1937 |
565-566 |
. |
denotes |
. |
T1938 |
566-1005 |
sentence |
denotes |
Thus, if the TACC genes were duplicated at both events, we would expect to identify four TACC genes in the most "primitive" compact vertebrate genome sequenced to date, the pufferfish Takifugu rubripes, with three genes corresponding to the human TACC1-3, and, in keeping with the proposed model for genomic duplication of the chromosomal loci for the TACC genes (discussed below), a possible fourth gene deriving from the TACC3 ancestor. |
T1939 |
567-571 |
RB |
denotes |
Thus |
T1940 |
632-638 |
VB |
denotes |
expect |
T1941 |
571-573 |
, |
denotes |
, |
T1942 |
573-575 |
IN |
denotes |
if |
T1943 |
596-606 |
VBN |
denotes |
duplicated |
T1944 |
576-579 |
DT |
denotes |
the |
T1945 |
585-590 |
NNS |
denotes |
genes |
T1946 |
580-584 |
NN |
denotes |
TACC |
T1947 |
591-595 |
VBD |
denotes |
were |
T1948 |
607-609 |
IN |
denotes |
at |
T1949 |
610-614 |
DT |
denotes |
both |
T1950 |
615-621 |
NNS |
denotes |
events |
T1951 |
621-623 |
, |
denotes |
, |
T1952 |
623-625 |
PRP |
denotes |
we |
T1953 |
626-631 |
MD |
denotes |
would |
T1954 |
639-641 |
TO |
denotes |
to |
T1955 |
642-650 |
VB |
denotes |
identify |
T1956 |
651-655 |
CD |
denotes |
four |
T1957 |
661-666 |
NNS |
denotes |
genes |
T1958 |
656-660 |
NN |
denotes |
TACC |
T1959 |
667-669 |
IN |
denotes |
in |
T1960 |
670-673 |
DT |
denotes |
the |
T1961 |
710-716 |
NN |
denotes |
genome |
T1962 |
674-678 |
JJS |
denotes |
most |
T1963 |
680-689 |
JJ |
denotes |
primitive |
T1964 |
679-680 |
`` |
denotes |
" |
T1965 |
689-690 |
'' |
denotes |
" |
T1966 |
691-698 |
JJ |
denotes |
compact |
T1967 |
699-709 |
NN |
denotes |
vertebrate |
T1968 |
717-726 |
VBN |
denotes |
sequenced |
T1969 |
727-729 |
IN |
denotes |
to |
T1970 |
730-734 |
NN |
denotes |
date |
T1971 |
734-736 |
, |
denotes |
, |
T1972 |
736-739 |
DT |
denotes |
the |
T1973 |
740-750 |
NN |
denotes |
pufferfish |
T1974 |
751-759 |
NNP |
denotes |
Takifugu |
T1975 |
760-768 |
NNP |
denotes |
rubripes |
T1976 |
768-770 |
, |
denotes |
, |
T1977 |
770-774 |
IN |
denotes |
with |
T1978 |
775-780 |
CD |
denotes |
three |
T1979 |
781-786 |
NNS |
denotes |
genes |
T1980 |
787-800 |
VBG |
denotes |
corresponding |
T1981 |
801-803 |
IN |
denotes |
to |
T1982 |
804-807 |
DT |
denotes |
the |
T1983 |
814-819 |
NN |
denotes |
TACC1 |
T1984 |
808-813 |
JJ |
denotes |
human |
T1985 |
819-820 |
HYPH |
denotes |
- |
T1986 |
820-821 |
CD |
denotes |
3 |
T1987 |
821-823 |
, |
denotes |
, |
T1988 |
823-826 |
CC |
denotes |
and |
T1989 |
826-828 |
, |
denotes |
, |
T1990 |
828-830 |
IN |
denotes |
in |
T1991 |
967-971 |
NN |
denotes |
gene |
T1992 |
831-838 |
VBG |
denotes |
keeping |
T1993 |
839-843 |
IN |
denotes |
with |
T1994 |
844-847 |
DT |
denotes |
the |
T1995 |
857-862 |
NN |
denotes |
model |
T1996 |
848-856 |
VBN |
denotes |
proposed |
T1997 |
863-866 |
IN |
denotes |
for |
T1998 |
867-874 |
JJ |
denotes |
genomic |
T1999 |
875-886 |
NN |
denotes |
duplication |
T2000 |
887-889 |
IN |
denotes |
of |
T2001 |
890-893 |
DT |
denotes |
the |
T2002 |
906-910 |
NNS |
denotes |
loci |
T2003 |
894-905 |
JJ |
denotes |
chromosomal |
T2004 |
911-914 |
IN |
denotes |
for |
T2005 |
915-918 |
DT |
denotes |
the |
T2006 |
924-929 |
NNS |
denotes |
genes |
T2007 |
919-923 |
NN |
denotes |
TACC |
T2008 |
930-931 |
-LRB- |
denotes |
( |
T2009 |
931-940 |
VBN |
denotes |
discussed |
T2010 |
941-946 |
RB |
denotes |
below |
T2011 |
946-947 |
-RRB- |
denotes |
) |
T2012 |
947-949 |
, |
denotes |
, |
T2013 |
949-950 |
DT |
denotes |
a |
T2014 |
951-959 |
JJ |
denotes |
possible |
T2015 |
960-966 |
JJ |
denotes |
fourth |
T2016 |
972-980 |
VBG |
denotes |
deriving |
T2017 |
981-985 |
IN |
denotes |
from |
T2018 |
986-989 |
DT |
denotes |
the |
T2019 |
996-1004 |
NN |
denotes |
ancestor |
T2020 |
990-995 |
NN |
denotes |
TACC3 |
T2021 |
1004-1005 |
. |
denotes |
. |
T2022 |
1005-1061 |
sentence |
denotes |
Indeed, four TACC genes were identified in T. rubripes. |
T2023 |
1006-1012 |
RB |
denotes |
Indeed |
T2024 |
1035-1045 |
VBN |
denotes |
identified |
T2025 |
1012-1014 |
, |
denotes |
, |
T2026 |
1014-1018 |
CD |
denotes |
four |
T2027 |
1024-1029 |
NNS |
denotes |
genes |
T2028 |
1019-1023 |
NN |
denotes |
TACC |
T2029 |
1030-1034 |
VBD |
denotes |
were |
T2030 |
1046-1048 |
IN |
denotes |
in |
T2031 |
1049-1051 |
NNP |
denotes |
T. |
T2032 |
1052-1060 |
NNP |
denotes |
rubripes |
T2033 |
1060-1061 |
. |
denotes |
. |
T2034 |
1061-1151 |
sentence |
denotes |
Of these, two genes corresponded to the T. rubripes orthologues of human TACC2 and TACC3. |
T2035 |
1062-1064 |
IN |
denotes |
Of |
T2036 |
1082-1094 |
VBD |
denotes |
corresponded |
T2037 |
1065-1070 |
DT |
denotes |
these |
T2038 |
1070-1072 |
, |
denotes |
, |
T2039 |
1072-1075 |
CD |
denotes |
two |
T2040 |
1076-1081 |
NNS |
denotes |
genes |
T2041 |
1095-1097 |
IN |
denotes |
to |
T2042 |
1098-1101 |
DT |
denotes |
the |
T2043 |
1114-1125 |
NNS |
denotes |
orthologues |
T2044 |
1102-1104 |
NNP |
denotes |
T. |
T2045 |
1105-1113 |
NNP |
denotes |
rubripes |
T2046 |
1126-1128 |
IN |
denotes |
of |
T2047 |
1129-1134 |
JJ |
denotes |
human |
T2048 |
1135-1140 |
NN |
denotes |
TACC2 |
T2049 |
1141-1144 |
CC |
denotes |
and |
T2050 |
1145-1150 |
NN |
denotes |
TACC3 |
T2051 |
1150-1151 |
. |
denotes |
. |
T2052 |
1151-1247 |
sentence |
denotes |
However, the other two genes, trTACC1A and trTACC1B are clearly most related to TACC1 (Fig. 1). |
T2053 |
1152-1159 |
RB |
denotes |
However |
T2054 |
1204-1207 |
VBP |
denotes |
are |
T2055 |
1159-1161 |
, |
denotes |
, |
T2056 |
1161-1164 |
DT |
denotes |
the |
T2057 |
1175-1180 |
NNS |
denotes |
genes |
T2058 |
1165-1170 |
JJ |
denotes |
other |
T2059 |
1171-1174 |
CD |
denotes |
two |
T2060 |
1180-1182 |
, |
denotes |
, |
T2061 |
1182-1190 |
NN |
denotes |
trTACC1A |
T2062 |
1191-1194 |
CC |
denotes |
and |
T2063 |
1195-1203 |
NN |
denotes |
trTACC1B |
T2064 |
1208-1215 |
RB |
denotes |
clearly |
T2065 |
1216-1220 |
RBS |
denotes |
most |
T2066 |
1221-1228 |
JJ |
denotes |
related |
T2067 |
1229-1231 |
IN |
denotes |
to |
T2068 |
1232-1237 |
NN |
denotes |
TACC1 |
T2069 |
1238-1239 |
-LRB- |
denotes |
( |
T2070 |
1239-1243 |
NN |
denotes |
Fig. |
T2071 |
1244-1245 |
CD |
denotes |
1 |
T2072 |
1245-1246 |
-RRB- |
denotes |
) |
T2073 |
1246-1247 |
. |
denotes |
. |
T2074 |
1247-1361 |
sentence |
denotes |
Although trTACC1A is highly homologous to trTACC1B, the latter encodes a significantly smaller predicted protein. |
T2075 |
1248-1256 |
IN |
denotes |
Although |
T2076 |
1266-1268 |
VBZ |
denotes |
is |
T2077 |
1257-1265 |
NN |
denotes |
trTACC1A |
T2078 |
1311-1318 |
VBZ |
denotes |
encodes |
T2079 |
1269-1275 |
RB |
denotes |
highly |
T2080 |
1276-1286 |
JJ |
denotes |
homologous |
T2081 |
1287-1289 |
IN |
denotes |
to |
T2082 |
1290-1298 |
NN |
denotes |
trTACC1B |
T2083 |
1298-1300 |
, |
denotes |
, |
T2084 |
1300-1303 |
DT |
denotes |
the |
T2085 |
1304-1310 |
JJ |
denotes |
latter |
T2086 |
1319-1320 |
DT |
denotes |
a |
T2087 |
1353-1360 |
NN |
denotes |
protein |
T2088 |
1321-1334 |
RB |
denotes |
significantly |
T2089 |
1335-1342 |
JJR |
denotes |
smaller |
T2090 |
1343-1352 |
VBN |
denotes |
predicted |
T2091 |
1360-1361 |
. |
denotes |
. |
T2092 |
1361-1468 |
sentence |
denotes |
The trTACC1B gene is encoded by 15 exons over approximately 7 kb of the Takifugu Scaffold 191 (see below). |
T2093 |
1362-1365 |
DT |
denotes |
The |
T2094 |
1375-1379 |
NN |
denotes |
gene |
T2095 |
1366-1374 |
NN |
denotes |
trTACC1B |
T2096 |
1383-1390 |
VBN |
denotes |
encoded |
T2097 |
1380-1382 |
VBZ |
denotes |
is |
T2098 |
1391-1393 |
IN |
denotes |
by |
T2099 |
1394-1396 |
CD |
denotes |
15 |
T2100 |
1397-1402 |
NNS |
denotes |
exons |
T2101 |
1403-1407 |
IN |
denotes |
over |
T2102 |
1408-1421 |
RB |
denotes |
approximately |
T2103 |
1422-1423 |
CD |
denotes |
7 |
T2104 |
1424-1426 |
NN |
denotes |
kb |
T2105 |
1427-1429 |
IN |
denotes |
of |
T2106 |
1430-1433 |
DT |
denotes |
the |
T2107 |
1443-1451 |
NNP |
denotes |
Scaffold |
T2108 |
1434-1442 |
NNP |
denotes |
Takifugu |
T2109 |
1452-1455 |
CD |
denotes |
191 |
T2110 |
1456-1457 |
-LRB- |
denotes |
( |
T2111 |
1457-1460 |
VB |
denotes |
see |
T2112 |
1461-1466 |
RB |
denotes |
below |
T2113 |
1466-1467 |
-RRB- |
denotes |
) |
T2114 |
1467-1468 |
. |
denotes |
. |
T2115 |
1468-1609 |
sentence |
denotes |
A search of this region using the trTACC1A sequence and gene prediction software has so far failed to identify additional exons of trTACC1B. |
T2116 |
1469-1470 |
DT |
denotes |
A |
T2117 |
1471-1477 |
NN |
denotes |
search |
T2118 |
1561-1567 |
VBN |
denotes |
failed |
T2119 |
1478-1480 |
IN |
denotes |
of |
T2120 |
1481-1485 |
DT |
denotes |
this |
T2121 |
1486-1492 |
NN |
denotes |
region |
T2122 |
1493-1498 |
VBG |
denotes |
using |
T2123 |
1499-1502 |
DT |
denotes |
the |
T2124 |
1541-1549 |
NN |
denotes |
software |
T2125 |
1503-1511 |
NN |
denotes |
trTACC1A |
T2126 |
1512-1520 |
NN |
denotes |
sequence |
T2127 |
1521-1524 |
CC |
denotes |
and |
T2128 |
1525-1529 |
NN |
denotes |
gene |
T2129 |
1530-1540 |
NN |
denotes |
prediction |
T2130 |
1550-1553 |
VBZ |
denotes |
has |
T2131 |
1554-1556 |
RB |
denotes |
so |
T2132 |
1557-1560 |
RB |
denotes |
far |
T2133 |
1568-1570 |
TO |
denotes |
to |
T2134 |
1571-1579 |
VB |
denotes |
identify |
T2135 |
1580-1590 |
JJ |
denotes |
additional |
T2136 |
1591-1596 |
NNS |
denotes |
exons |
T2137 |
1597-1599 |
IN |
denotes |
of |
T2138 |
1600-1608 |
NN |
denotes |
trTACC1B |
T2139 |
1608-1609 |
. |
denotes |
. |
T2140 |
1609-1906 |
sentence |
denotes |
However, given the intron/exon structure of this apparently complete gene, it appears likely that trTACC1B is active in the pufferfish, and presumably fulfils either a temporal-spatial specific function within the organism, or a distinct function from the larger trTACC1A product within the cell. |
T2141 |
1610-1617 |
RB |
denotes |
However |
T2142 |
1688-1695 |
VBZ |
denotes |
appears |
T2143 |
1617-1619 |
, |
denotes |
, |
T2144 |
1619-1624 |
VBN |
denotes |
given |
T2145 |
1625-1628 |
DT |
denotes |
the |
T2146 |
1641-1650 |
NN |
denotes |
structure |
T2147 |
1629-1635 |
NN |
denotes |
intron |
T2148 |
1636-1640 |
NN |
denotes |
exon |
T2149 |
1635-1636 |
HYPH |
denotes |
/ |
T2150 |
1651-1653 |
IN |
denotes |
of |
T2151 |
1654-1658 |
DT |
denotes |
this |
T2152 |
1679-1683 |
NN |
denotes |
gene |
T2153 |
1659-1669 |
RB |
denotes |
apparently |
T2154 |
1670-1678 |
JJ |
denotes |
complete |
T2155 |
1683-1685 |
, |
denotes |
, |
T2156 |
1685-1687 |
PRP |
denotes |
it |
T2157 |
1696-1702 |
JJ |
denotes |
likely |
T2158 |
1703-1707 |
IN |
denotes |
that |
T2159 |
1717-1719 |
VBZ |
denotes |
is |
T2160 |
1708-1716 |
NN |
denotes |
trTACC1B |
T2161 |
1720-1726 |
JJ |
denotes |
active |
T2162 |
1727-1729 |
IN |
denotes |
in |
T2163 |
1730-1733 |
DT |
denotes |
the |
T2164 |
1734-1744 |
NN |
denotes |
pufferfish |
T2165 |
1744-1746 |
, |
denotes |
, |
T2166 |
1746-1749 |
CC |
denotes |
and |
T2167 |
1750-1760 |
RB |
denotes |
presumably |
T2168 |
1761-1768 |
VBZ |
denotes |
fulfils |
T2169 |
1769-1775 |
CC |
denotes |
either |
T2170 |
1804-1812 |
NN |
denotes |
function |
T2171 |
1776-1777 |
DT |
denotes |
a |
T2172 |
1778-1786 |
JJ |
denotes |
temporal |
T2173 |
1787-1794 |
JJ |
denotes |
spatial |
T2174 |
1786-1787 |
HYPH |
denotes |
- |
T2175 |
1795-1803 |
JJ |
denotes |
specific |
T2176 |
1813-1819 |
IN |
denotes |
within |
T2177 |
1820-1823 |
DT |
denotes |
the |
T2178 |
1824-1832 |
NN |
denotes |
organism |
T2179 |
1832-1834 |
, |
denotes |
, |
T2180 |
1834-1836 |
CC |
denotes |
or |
T2181 |
1837-1838 |
DT |
denotes |
a |
T2182 |
1848-1856 |
NN |
denotes |
function |
T2183 |
1839-1847 |
JJ |
denotes |
distinct |
T2184 |
1857-1861 |
IN |
denotes |
from |
T2185 |
1862-1865 |
DT |
denotes |
the |
T2186 |
1882-1889 |
NN |
denotes |
product |
T2187 |
1866-1872 |
JJR |
denotes |
larger |
T2188 |
1873-1881 |
NN |
denotes |
trTACC1A |
T2189 |
1890-1896 |
IN |
denotes |
within |
T2190 |
1897-1900 |
DT |
denotes |
the |
T2191 |
1901-1905 |
NN |
denotes |
cell |
T2192 |
1905-1906 |
. |
denotes |
. |
T2193 |
1906-2198 |
sentence |
denotes |
Thus, based upon the surrounding chromosomal loci (see below), the trTACC1A and trTACC1B genes appear to have arisen from the duplication of the chromosomal segment containing the teleost TACC1 ancestor, during the additional partial genomic duplication that occurred in the teleost lineage. |
T2194 |
1907-1911 |
RB |
denotes |
Thus |
T2195 |
2002-2008 |
VBP |
denotes |
appear |
T2196 |
1911-1913 |
, |
denotes |
, |
T2197 |
1913-1918 |
VBN |
denotes |
based |
T2198 |
1919-1923 |
IN |
denotes |
upon |
T2199 |
1924-1927 |
DT |
denotes |
the |
T2200 |
1952-1956 |
NNS |
denotes |
loci |
T2201 |
1928-1939 |
VBG |
denotes |
surrounding |
T2202 |
1940-1951 |
JJ |
denotes |
chromosomal |
T2203 |
1957-1958 |
-LRB- |
denotes |
( |
T2204 |
1958-1961 |
VB |
denotes |
see |
T2205 |
1962-1967 |
RB |
denotes |
below |
T2206 |
1967-1968 |
-RRB- |
denotes |
) |
T2207 |
1968-1970 |
, |
denotes |
, |
T2208 |
1970-1973 |
DT |
denotes |
the |
T2209 |
1996-2001 |
NNS |
denotes |
genes |
T2210 |
1974-1982 |
NN |
denotes |
trTACC1A |
T2211 |
1983-1986 |
CC |
denotes |
and |
T2212 |
1987-1995 |
NN |
denotes |
trTACC1B |
T2213 |
2009-2011 |
TO |
denotes |
to |
T2214 |
2017-2023 |
VBN |
denotes |
arisen |
T2215 |
2012-2016 |
VB |
denotes |
have |
T2216 |
2024-2028 |
IN |
denotes |
from |
T2217 |
2029-2032 |
DT |
denotes |
the |
T2218 |
2033-2044 |
NN |
denotes |
duplication |
T2219 |
2045-2047 |
IN |
denotes |
of |
T2220 |
2048-2051 |
DT |
denotes |
the |
T2221 |
2064-2071 |
NN |
denotes |
segment |
T2222 |
2052-2063 |
JJ |
denotes |
chromosomal |
T2223 |
2072-2082 |
VBG |
denotes |
containing |
T2224 |
2083-2086 |
DT |
denotes |
the |
T2225 |
2101-2109 |
NN |
denotes |
ancestor |
T2226 |
2087-2094 |
NN |
denotes |
teleost |
T2227 |
2095-2100 |
NN |
denotes |
TACC1 |
T2228 |
2109-2111 |
, |
denotes |
, |
T2229 |
2111-2117 |
IN |
denotes |
during |
T2230 |
2118-2121 |
DT |
denotes |
the |
T2231 |
2149-2160 |
NN |
denotes |
duplication |
T2232 |
2122-2132 |
JJ |
denotes |
additional |
T2233 |
2133-2140 |
JJ |
denotes |
partial |
T2234 |
2141-2148 |
JJ |
denotes |
genomic |
T2235 |
2161-2165 |
WDT |
denotes |
that |
T2236 |
2166-2174 |
VBD |
denotes |
occurred |
T2237 |
2175-2177 |
IN |
denotes |
in |
T2238 |
2178-2181 |
DT |
denotes |
the |
T2239 |
2190-2197 |
NN |
denotes |
lineage |
T2240 |
2182-2189 |
NN |
denotes |
teleost |
T2241 |
2197-2198 |
. |
denotes |
. |
T2242 |
2198-2385 |
sentence |
denotes |
Therefore, this analysis of T. rubripes does not support the hypothesis that the region surrounding the TACC3 ancestor was included in the second round of vertebrate genomic duplication. |
T2243 |
2199-2208 |
RB |
denotes |
Therefore |
T2244 |
2248-2255 |
VB |
denotes |
support |
T2245 |
2208-2210 |
, |
denotes |
, |
T2246 |
2210-2214 |
DT |
denotes |
this |
T2247 |
2215-2223 |
NN |
denotes |
analysis |
T2248 |
2224-2226 |
IN |
denotes |
of |
T2249 |
2227-2229 |
NNP |
denotes |
T. |
T2250 |
2230-2238 |
NNP |
denotes |
rubripes |
T2251 |
2239-2243 |
VBZ |
denotes |
does |
T2252 |
2244-2247 |
RB |
denotes |
not |
T2253 |
2256-2259 |
DT |
denotes |
the |
T2254 |
2260-2270 |
NN |
denotes |
hypothesis |
T2255 |
2271-2275 |
IN |
denotes |
that |
T2256 |
2322-2330 |
VBN |
denotes |
included |
T2257 |
2276-2279 |
DT |
denotes |
the |
T2258 |
2280-2286 |
NN |
denotes |
region |
T2259 |
2287-2298 |
VBG |
denotes |
surrounding |
T2260 |
2299-2302 |
DT |
denotes |
the |
T2261 |
2309-2317 |
NN |
denotes |
ancestor |
T2262 |
2303-2308 |
NN |
denotes |
TACC3 |
T2263 |
2318-2321 |
VBD |
denotes |
was |
T2264 |
2331-2333 |
IN |
denotes |
in |
T2265 |
2334-2337 |
DT |
denotes |
the |
T2266 |
2345-2350 |
NN |
denotes |
round |
T2267 |
2338-2344 |
JJ |
denotes |
second |
T2268 |
2351-2353 |
IN |
denotes |
of |
T2269 |
2354-2364 |
NN |
denotes |
vertebrate |
T2270 |
2373-2384 |
NN |
denotes |
duplication |
T2271 |
2365-2372 |
JJ |
denotes |
genomic |
T2272 |
2384-2385 |
. |
denotes |
. |
T1844 |
63-66 |
VBD |
denotes |
was |
T1845 |
78-80 |
IN |
denotes |
in |
T1846 |
81-84 |
DT |
denotes |
the |
T1847 |
85-91 |
NN |
denotes |
genome |
T1848 |
92-94 |
IN |
denotes |
of |
T1849 |
95-98 |
DT |
denotes |
the |
T1812 |
0-1 |
NN |
denotes |
A |
T1813 |
1-2 |
IN |
denotes |
t |
T1814 |
3-6 |
JJ |
denotes |
the |
T1815 |
7-8 |
sentence |
denotes |
b |
T1816 |
7-8 |
VBN |
denotes |
b |
T1817 |
8-22 |
sentence |
denotes |
ase of the cho |
T1818 |
8-9 |
NN |
denotes |
a |
T1819 |
9-10 |
VBZ |
denotes |
s |
T1820 |
10-11 |
JJ |
denotes |
e |
T1821 |
12-14 |
IN |
denotes |
of |
T1822 |
15-16 |
VBG |
denotes |
t |
T1823 |
16-18 |
JJ |
denotes |
he |
T1824 |
19-20 |
VBN |
denotes |
c |
T1825 |
20-21 |
JJ |
denotes |
h |
T1826 |
21-22 |
NNS |
denotes |
o |
T1827 |
22-28 |
sentence |
denotes |
rdate |
T1828 |
22-23 |
NN |
denotes |
r |
T1829 |
23-24 |
JJ |
denotes |
d |
T1830 |
24-25 |
CC |
denotes |
a |
T1831 |
25-27 |
NN |
denotes |
te |
T1832 |
28-226 |
sentence |
denotes |
branch of life, a single TACC gene was identified in the genome of the urochordate Ciona intestinalis [11], and a partial TACC sequence from an analysis of the Halocynthia rortezi EST database [12]. |
T1833 |
67-77 |
VBN |
denotes |
identified |
T1834 |
28-29 |
NN |
denotes |
b |
T1835 |
31-34 |
NN |
denotes |
nch |
T1836 |
29-31 |
NN |
denotes |
ra |
T1837 |
35-37 |
IN |
denotes |
of |
T1838 |
38-42 |
NN |
denotes |
life |
T1839 |
42-44 |
, |
denotes |
, |
T1840 |
44-45 |
DT |
denotes |
a |
T1841 |
58-62 |
NN |
denotes |
gene |
T1842 |
46-52 |
JJ |
denotes |
single |
T1843 |
53-57 |
NN |
denotes |
TACC |
T1850 |
99-110 |
NN |
denotes |
urochordate |
R1025 |
T1845 |
T1833 |
prep |
in,identified |
R1026 |
T1846 |
T1847 |
det |
the,genome |
R1027 |
T1847 |
T1845 |
pobj |
genome,in |
R1028 |
T1848 |
T1847 |
prep |
of,genome |
R1029 |
T1849 |
T1850 |
det |
the,urochordate |
R1030 |
T1850 |
T1848 |
pobj |
urochordate,of |
R1031 |
T1851 |
T1852 |
compound |
Ciona,intestinalis |
R1032 |
T1852 |
T1850 |
appos |
intestinalis,urochordate |
R1033 |
T1853 |
T1854 |
punct |
[,11 |
R1034 |
T1854 |
T1850 |
parataxis |
11,urochordate |
R1035 |
T1855 |
T1854 |
punct |
],11 |
R1036 |
T1856 |
T1847 |
punct |
", ",genome |
R1037 |
T1857 |
T1847 |
cc |
and,genome |
R1038 |
T1858 |
T1859 |
det |
a,sequence |
R1039 |
T1859 |
T1847 |
conj |
sequence,genome |
R1040 |
T1860 |
T1859 |
amod |
partial,sequence |
R1041 |
T1861 |
T1859 |
compound |
TACC,sequence |
R1042 |
T1862 |
T1859 |
prep |
from,sequence |
R1043 |
T1863 |
T1864 |
det |
an,analysis |
R1044 |
T1864 |
T1862 |
pobj |
analysis,from |
R1045 |
T1865 |
T1864 |
prep |
of,analysis |
R1046 |
T1866 |
T1867 |
det |
the,database |
R1047 |
T1867 |
T1865 |
pobj |
database,of |
R1048 |
T1868 |
T1869 |
compound |
Halocynthia,rortezi |
R1049 |
T1869 |
T1867 |
compound |
rortezi,database |
R1050 |
T1870 |
T1867 |
compound |
EST,database |
R1051 |
T1871 |
T1872 |
punct |
[,12 |
R1052 |
T1872 |
T1864 |
parataxis |
12,analysis |
R1053 |
T1873 |
T1872 |
punct |
],12 |
R1054 |
T1874 |
T1833 |
punct |
.,identified |
R1055 |
T1876 |
T1877 |
nsubj |
This,confirms |
R1056 |
T1878 |
T1879 |
det |
the,assumption |
R1057 |
T1879 |
T1877 |
dobj |
assumption,confirms |
R1058 |
T1880 |
T1879 |
amod |
original,assumption |
R1059 |
T1881 |
T1882 |
mark |
that,was |
R1060 |
T1882 |
T1879 |
acl |
was,assumption |
R1061 |
T1883 |
T1884 |
det |
a,gene |
R1062 |
T1884 |
T1882 |
nsubj |
gene,was |
R1063 |
T1885 |
T1884 |
amod |
single,gene |
R1064 |
T1886 |
T1884 |
compound |
TACC,gene |
R1065 |
T1887 |
T1882 |
acomp |
present,was |
R1066 |
T1888 |
T1882 |
prep |
in,was |
R1067 |
T1889 |
T1890 |
det |
the,ancestor |
R1068 |
T1890 |
T1888 |
pobj |
ancestor,in |
R1069 |
T1891 |
T1890 |
compound |
chordate,ancestor |
R1070 |
T1892 |
T1877 |
punct |
.,confirms |
R1071 |
T1894 |
T1895 |
det |
The,event |
R1072 |
T1895 |
T1898 |
nsubjpass |
event,suggested |
R1073 |
T1896 |
T1895 |
amod |
next,event |
R1074 |
T1897 |
T1895 |
amod |
major,event |
R1075 |
T1899 |
T1895 |
prep |
in,event |
R1076 |
T1900 |
T1901 |
det |
the,evolution |
R1077 |
T1901 |
T1899 |
pobj |
evolution,in |
R1078 |
T1902 |
T1901 |
prep |
of,evolution |
R1079 |
T1903 |
T1904 |
det |
the,genome |
R1080 |
T1904 |
T1902 |
pobj |
genome,of |
R1081 |
T1905 |
T1904 |
compound |
chordate,genome |
R1082 |
T1906 |
T1898 |
aux |
has,suggested |
R1083 |
T1907 |
T1898 |
auxpass |
been,suggested |
R1084 |
T1908 |
T1909 |
aux |
to,occurred |
R1085 |
T1909 |
T1898 |
xcomp |
occurred,suggested |
R1086 |
T1910 |
T1909 |
aux |
have,occurred |
R1087 |
T1911 |
T1912 |
quantmod |
687,155.7 |
R1088 |
T1912 |
T1914 |
nummod |
155.7,years |
R1089 |
T1913 |
T1912 |
punct |
±,155.7 |
R1090 |
T1914 |
T1916 |
npadvmod |
years,ago |
R1091 |
T1915 |
T1914 |
nummod |
million,years |
R1092 |
T1916 |
T1909 |
advmod |
ago,occurred |
R1093 |
T1917 |
T1918 |
punct |
(,MYA |
R1094 |
T1918 |
T1916 |
parataxis |
MYA,ago |
R1095 |
T1919 |
T1918 |
punct |
),MYA |
R1096 |
T1920 |
T1909 |
punct |
", ",occurred |
R1097 |
T1921 |
T1909 |
prep |
with,occurred |
R1098 |
T1922 |
T1923 |
det |
the,duplication |
R1099 |
T1923 |
T1921 |
pobj |
duplication,with |
R1100 |
T1924 |
T1923 |
amod |
first,duplication |
R1101 |
T1925 |
T1923 |
prep |
of,duplication |
R1102 |
T1926 |
T1927 |
det |
the,genome |
R1103 |
T1927 |
T1925 |
pobj |
genome,of |
R1104 |
T1928 |
T1927 |
compound |
chordate,genome |
R1105 |
T1929 |
T1923 |
punct |
", ",duplication |
R1106 |
T1930 |
T1923 |
cc |
and,duplication |
R1107 |
T1931 |
T1932 |
det |
a,duplication |
R1108 |
T1932 |
T1923 |
conj |
duplication,duplication |
R1109 |
T1933 |
T1932 |
amod |
second,duplication |
R1110 |
T1934 |
T1932 |
acl |
occurring,duplication |
R1111 |
T1935 |
T1936 |
advmod |
shortly,thereafter |
R1112 |
T1936 |
T1934 |
advmod |
thereafter,occurring |
R1113 |
T1937 |
T1898 |
punct |
.,suggested |
R1114 |
T1939 |
T1940 |
advmod |
Thus,expect |
R1115 |
T1941 |
T1940 |
punct |
", ",expect |
R1116 |
T1942 |
T1943 |
mark |
if,duplicated |
R1117 |
T1943 |
T1940 |
advcl |
duplicated,expect |
R1118 |
T1944 |
T1945 |
det |
the,genes |
R1119 |
T1945 |
T1943 |
nsubjpass |
genes,duplicated |
R1120 |
T1946 |
T1945 |
compound |
TACC,genes |
R1121 |
T1947 |
T1943 |
auxpass |
were,duplicated |
R1122 |
T1948 |
T1943 |
prep |
at,duplicated |
R1123 |
T1949 |
T1950 |
det |
both,events |
R1124 |
T1950 |
T1948 |
pobj |
events,at |
R1125 |
T1951 |
T1940 |
punct |
", ",expect |
R1126 |
T1952 |
T1940 |
nsubj |
we,expect |
R1127 |
T1953 |
T1940 |
aux |
would,expect |
R1128 |
T1954 |
T1955 |
aux |
to,identify |
R1129 |
T1955 |
T1940 |
xcomp |
identify,expect |
R1130 |
T1956 |
T1957 |
nummod |
four,genes |
R1131 |
T1957 |
T1955 |
dobj |
genes,identify |
R1132 |
T1958 |
T1957 |
compound |
TACC,genes |
R1133 |
T1959 |
T1955 |
prep |
in,identify |
R1134 |
T1960 |
T1961 |
det |
the,genome |
R1135 |
T1961 |
T1959 |
pobj |
genome,in |
R1136 |
T1962 |
T1963 |
amod |
most,primitive |
R1137 |
T1963 |
T1961 |
amod |
primitive,genome |
R1138 |
T1964 |
T1963 |
punct |
"""",primitive |
R1139 |
T1965 |
T1963 |
punct |
"""",primitive |
R1140 |
T1966 |
T1961 |
amod |
compact,genome |
R1141 |
T1967 |
T1961 |
compound |
vertebrate,genome |
R1142 |
T1968 |
T1961 |
acl |
sequenced,genome |
R1143 |
T1969 |
T1961 |
prep |
to,genome |
R1144 |
T1970 |
T1969 |
pobj |
date,to |
R1145 |
T1971 |
T1961 |
punct |
", ",genome |
R1146 |
T1972 |
T1973 |
det |
the,pufferfish |
R1147 |
T1973 |
T1961 |
appos |
pufferfish,genome |
R1148 |
T1974 |
T1975 |
compound |
Takifugu,rubripes |
R1149 |
T1975 |
T1973 |
appos |
rubripes,pufferfish |
R1150 |
T1976 |
T1973 |
punct |
", ",pufferfish |
R1151 |
T1977 |
T1973 |
prep |
with,pufferfish |
R1152 |
T1978 |
T1979 |
nummod |
three,genes |
R1153 |
T1979 |
T1977 |
pobj |
genes,with |
R1154 |
T1980 |
T1979 |
acl |
corresponding,genes |
R1155 |
T1981 |
T1980 |
prep |
to,corresponding |
R1156 |
T1982 |
T1983 |
det |
the,TACC1 |
R1157 |
T1983 |
T1981 |
pobj |
TACC1,to |
R1158 |
T1984 |
T1983 |
amod |
human,TACC1 |
R1159 |
T1985 |
T1983 |
punct |
-,TACC1 |
R1160 |
T1986 |
T1983 |
nummod |
3,TACC1 |
R1161 |
T1987 |
T1979 |
punct |
", ",genes |
R1162 |
T1988 |
T1979 |
cc |
and,genes |
R1163 |
T1989 |
T1979 |
punct |
", ",genes |
R1164 |
T1990 |
T1991 |
prep |
in,gene |
R1165 |
T1991 |
T1979 |
conj |
gene,genes |
R1166 |
T1992 |
T1990 |
pobj |
keeping,in |
R1167 |
T1993 |
T1992 |
prep |
with,keeping |
R1168 |
T1994 |
T1995 |
det |
the,model |
R1169 |
T1995 |
T1993 |
pobj |
model,with |
R1170 |
T1996 |
T1995 |
amod |
proposed,model |
R1171 |
T1997 |
T1995 |
prep |
for,model |
R1172 |
T1998 |
T1999 |
amod |
genomic,duplication |
R1173 |
T1999 |
T1997 |
pobj |
duplication,for |
R1174 |
T2000 |
T1999 |
prep |
of,duplication |
R1175 |
T2001 |
T2002 |
det |
the,loci |
R1176 |
T2002 |
T2000 |
pobj |
loci,of |
R1177 |
T2003 |
T2002 |
amod |
chromosomal,loci |
R1178 |
T2004 |
T1995 |
prep |
for,model |
R1179 |
T2005 |
T2006 |
det |
the,genes |
R1180 |
T2006 |
T2004 |
pobj |
genes,for |
R1181 |
T2007 |
T2006 |
compound |
TACC,genes |
R1182 |
T2008 |
T2009 |
punct |
(,discussed |
R1183 |
T2009 |
T1995 |
parataxis |
discussed,model |
R1184 |
T2010 |
T2009 |
advmod |
below,discussed |
R1185 |
T2011 |
T2009 |
punct |
),discussed |
R1186 |
T2012 |
T1991 |
punct |
", ",gene |
R1187 |
T2013 |
T1991 |
det |
a,gene |
R1188 |
T2014 |
T1991 |
amod |
possible,gene |
R1189 |
T2015 |
T1991 |
amod |
fourth,gene |
R1190 |
T2016 |
T1991 |
acl |
deriving,gene |
R1191 |
T2017 |
T2016 |
prep |
from,deriving |
R1192 |
T2018 |
T2019 |
det |
the,ancestor |
R1193 |
T2019 |
T2017 |
pobj |
ancestor,from |
R1194 |
T2020 |
T2019 |
compound |
TACC3,ancestor |
R1195 |
T2021 |
T1940 |
punct |
.,expect |
R1196 |
T2023 |
T2024 |
advmod |
Indeed,identified |
R1197 |
T2025 |
T2024 |
punct |
", ",identified |
R1198 |
T2026 |
T2027 |
nummod |
four,genes |
R1199 |
T2027 |
T2024 |
nsubjpass |
genes,identified |
R1200 |
T2028 |
T2027 |
compound |
TACC,genes |
R1201 |
T2029 |
T2024 |
auxpass |
were,identified |
R1202 |
T2030 |
T2024 |
prep |
in,identified |
R1203 |
T2031 |
T2032 |
compound |
T.,rubripes |
R1204 |
T2032 |
T2030 |
pobj |
rubripes,in |
R1205 |
T2033 |
T2024 |
punct |
.,identified |
R1206 |
T2035 |
T2036 |
prep |
Of,corresponded |
R1207 |
T2037 |
T2035 |
pobj |
these,Of |
R1208 |
T2038 |
T2036 |
punct |
", ",corresponded |
R1209 |
T2039 |
T2040 |
nummod |
two,genes |
R1210 |
T2040 |
T2036 |
nsubj |
genes,corresponded |
R1211 |
T2041 |
T2036 |
prep |
to,corresponded |
R1212 |
T2042 |
T2043 |
det |
the,orthologues |
R1213 |
T2043 |
T2041 |
pobj |
orthologues,to |
R1214 |
T2044 |
T2045 |
compound |
T.,rubripes |
R1215 |
T2045 |
T2043 |
compound |
rubripes,orthologues |
R1216 |
T2046 |
T2043 |
prep |
of,orthologues |
R1217 |
T2047 |
T2048 |
amod |
human,TACC2 |
R1218 |
T2048 |
T2046 |
pobj |
TACC2,of |
R1219 |
T2049 |
T2048 |
cc |
and,TACC2 |
R1220 |
T2050 |
T2048 |
conj |
TACC3,TACC2 |
R1221 |
T2051 |
T2036 |
punct |
.,corresponded |
R1222 |
T2053 |
T2054 |
advmod |
However,are |
R1223 |
T2055 |
T2054 |
punct |
", ",are |
R1224 |
T2056 |
T2057 |
det |
the,genes |
R1225 |
T2057 |
T2054 |
nsubj |
genes,are |
R1226 |
T2058 |
T2057 |
amod |
other,genes |
R1227 |
T2059 |
T2057 |
nummod |
two,genes |
R1228 |
T2060 |
T2057 |
punct |
", ",genes |
R1229 |
T2061 |
T2057 |
appos |
trTACC1A,genes |
R1230 |
T2062 |
T2061 |
cc |
and,trTACC1A |
R1231 |
T2063 |
T2061 |
conj |
trTACC1B,trTACC1A |
R1232 |
T2064 |
T2054 |
advmod |
clearly,are |
R1233 |
T2065 |
T2066 |
advmod |
most,related |
R1234 |
T2066 |
T2054 |
acomp |
related,are |
R1235 |
T2067 |
T2066 |
prep |
to,related |
R1236 |
T2068 |
T2067 |
pobj |
TACC1,to |
R1237 |
T2069 |
T2070 |
punct |
(,Fig. |
R1238 |
T2070 |
T2054 |
parataxis |
Fig.,are |
R1239 |
T2071 |
T2070 |
nummod |
1,Fig. |
R1240 |
T2072 |
T2070 |
punct |
),Fig. |
R1241 |
T2073 |
T2054 |
punct |
.,are |
R1242 |
T2075 |
T2076 |
mark |
Although,is |
R1243 |
T2076 |
T2078 |
advcl |
is,encodes |
R1244 |
T2077 |
T2076 |
nsubj |
trTACC1A,is |
R1245 |
T2079 |
T2080 |
advmod |
highly,homologous |
R1246 |
T2080 |
T2076 |
acomp |
homologous,is |
R1247 |
T2081 |
T2080 |
prep |
to,homologous |
R1248 |
T2082 |
T2081 |
pobj |
trTACC1B,to |
R1249 |
T2083 |
T2078 |
punct |
", ",encodes |
R1250 |
T2084 |
T2085 |
det |
the,latter |
R1251 |
T2085 |
T2078 |
nsubj |
latter,encodes |
R1252 |
T2086 |
T2087 |
det |
a,protein |
R1253 |
T2087 |
T2078 |
dobj |
protein,encodes |
R1254 |
T2088 |
T2089 |
advmod |
significantly,smaller |
R1255 |
T2089 |
T2087 |
amod |
smaller,protein |
R1256 |
T2090 |
T2087 |
amod |
predicted,protein |
R1257 |
T2091 |
T2078 |
punct |
.,encodes |
R1258 |
T2093 |
T2094 |
det |
The,gene |
R1259 |
T2094 |
T2096 |
nsubjpass |
gene,encoded |
R1260 |
T2095 |
T2094 |
compound |
trTACC1B,gene |
R1261 |
T2097 |
T2096 |
auxpass |
is,encoded |
R1262 |
T2098 |
T2096 |
agent |
by,encoded |
R1263 |
T2099 |
T2100 |
nummod |
15,exons |
R1264 |
T2100 |
T2098 |
pobj |
exons,by |
R1265 |
T2101 |
T2096 |
prep |
over,encoded |
R1266 |
T2102 |
T2103 |
advmod |
approximately,7 |
R1267 |
T2103 |
T2104 |
nummod |
7,kb |
R1268 |
T2104 |
T2101 |
pobj |
kb,over |
R1269 |
T2105 |
T2104 |
prep |
of,kb |
R1270 |
T2106 |
T2107 |
det |
the,Scaffold |
R1271 |
T2107 |
T2105 |
pobj |
Scaffold,of |
R1272 |
T2108 |
T2107 |
compound |
Takifugu,Scaffold |
R1273 |
T2109 |
T2107 |
nummod |
191,Scaffold |
R1274 |
T2110 |
T2111 |
punct |
(,see |
R1275 |
T2111 |
T2096 |
parataxis |
see,encoded |
R1276 |
T2112 |
T2111 |
advmod |
below,see |
R1277 |
T2113 |
T2111 |
punct |
),see |
R1278 |
T2114 |
T2096 |
punct |
.,encoded |
R1279 |
T2116 |
T2117 |
det |
A,search |
R1280 |
T2117 |
T2118 |
nsubj |
search,failed |
R1281 |
T2119 |
T2117 |
prep |
of,search |
R1282 |
T2120 |
T2121 |
det |
this,region |
R1283 |
T2121 |
T2119 |
pobj |
region,of |
R1284 |
T2122 |
T2117 |
acl |
using,search |
R1285 |
T2123 |
T2124 |
det |
the,software |
R1286 |
T2124 |
T2122 |
dobj |
software,using |
R1287 |
T2125 |
T2126 |
nmod |
trTACC1A,sequence |
R1288 |
T2126 |
T2124 |
nmod |
sequence,software |
R1289 |
T2127 |
T2126 |
cc |
and,sequence |
R1290 |
T2128 |
T2129 |
compound |
gene,prediction |
R1291 |
T2129 |
T2126 |
conj |
prediction,sequence |
R1292 |
T2130 |
T2118 |
aux |
has,failed |
R1293 |
T2131 |
T2132 |
advmod |
so,far |
R1294 |
T2132 |
T2118 |
advmod |
far,failed |
R1295 |
T2133 |
T2134 |
aux |
to,identify |
R1296 |
T2134 |
T2118 |
xcomp |
identify,failed |
R1297 |
T2135 |
T2136 |
amod |
additional,exons |
R1298 |
T2136 |
T2134 |
dobj |
exons,identify |
R1299 |
T2137 |
T2136 |
prep |
of,exons |
R1300 |
T2138 |
T2137 |
pobj |
trTACC1B,of |
R1301 |
T2139 |
T2118 |
punct |
.,failed |
R1302 |
T2141 |
T2142 |
advmod |
However,appears |
R1303 |
T2143 |
T2142 |
punct |
", ",appears |
R1304 |
T2144 |
T2142 |
prep |
given,appears |
R1305 |
T2145 |
T2146 |
det |
the,structure |
R1306 |
T2146 |
T2144 |
pobj |
structure,given |
R1307 |
T2147 |
T2148 |
compound |
intron,exon |
R1308 |
T2148 |
T2146 |
compound |
exon,structure |
R1309 |
T2149 |
T2148 |
punct |
/,exon |
R1310 |
T2150 |
T2146 |
prep |
of,structure |
R1311 |
T2151 |
T2152 |
det |
this,gene |
R1312 |
T2152 |
T2150 |
pobj |
gene,of |
R1313 |
T2153 |
T2154 |
advmod |
apparently,complete |
R1314 |
T2154 |
T2152 |
amod |
complete,gene |
R1315 |
T2155 |
T2142 |
punct |
", ",appears |
R1316 |
T2156 |
T2142 |
nsubj |
it,appears |
R1317 |
T2157 |
T2142 |
oprd |
likely,appears |
R1318 |
T2158 |
T2159 |
mark |
that,is |
R1319 |
T2159 |
T2142 |
ccomp |
is,appears |
R1320 |
T2160 |
T2159 |
nsubj |
trTACC1B,is |
R1321 |
T2161 |
T2159 |
acomp |
active,is |
R1322 |
T2162 |
T2159 |
prep |
in,is |
R1323 |
T2163 |
T2164 |
det |
the,pufferfish |
R1324 |
T2164 |
T2162 |
pobj |
pufferfish,in |
R1325 |
T2165 |
T2159 |
punct |
", ",is |
R1326 |
T2166 |
T2159 |
cc |
and,is |
R1327 |
T2167 |
T2168 |
advmod |
presumably,fulfils |
R1328 |
T2168 |
T2159 |
conj |
fulfils,is |
R1329 |
T2169 |
T2170 |
preconj |
either,function |
R1330 |
T2170 |
T2168 |
dobj |
function,fulfils |
R1331 |
T2171 |
T2170 |
det |
a,function |
R1332 |
T2172 |
T2173 |
amod |
temporal,spatial |
R1333 |
T2173 |
T2170 |
amod |
spatial,function |
R1334 |
T2174 |
T2173 |
punct |
-,spatial |
R1335 |
T2175 |
T2170 |
amod |
specific,function |
R1336 |
T2176 |
T2170 |
prep |
within,function |
R1337 |
T2177 |
T2178 |
det |
the,organism |
R1338 |
T2178 |
T2176 |
pobj |
organism,within |
R1339 |
T2179 |
T2170 |
punct |
", ",function |
R1340 |
T2180 |
T2170 |
cc |
or,function |
R1341 |
T2181 |
T2182 |
det |
a,function |
R1342 |
T2182 |
T2170 |
conj |
function,function |
R1343 |
T2183 |
T2182 |
amod |
distinct,function |
R1344 |
T2184 |
T2182 |
prep |
from,function |
R1345 |
T2185 |
T2186 |
det |
the,product |
R1346 |
T2186 |
T2184 |
pobj |
product,from |
R1347 |
T2187 |
T2186 |
amod |
larger,product |
R1348 |
T2188 |
T2186 |
compound |
trTACC1A,product |
R1349 |
T2189 |
T2182 |
prep |
within,function |
R1350 |
T2190 |
T2191 |
det |
the,cell |
R1351 |
T2191 |
T2189 |
pobj |
cell,within |
R1352 |
T2192 |
T2142 |
punct |
.,appears |
R1353 |
T2194 |
T2195 |
advmod |
Thus,appear |
R1354 |
T2196 |
T2195 |
punct |
", ",appear |
R1355 |
T2197 |
T2195 |
prep |
based,appear |
R1356 |
T2198 |
T2197 |
prep |
upon,based |
R1357 |
T2199 |
T2200 |
det |
the,loci |
R1358 |
T2200 |
T2198 |
pobj |
loci,upon |
R1359 |
T2201 |
T2200 |
amod |
surrounding,loci |
R1360 |
T2202 |
T2200 |
amod |
chromosomal,loci |
R1361 |
T2203 |
T2204 |
punct |
(,see |
R1362 |
T2204 |
T2200 |
parataxis |
see,loci |
R1363 |
T2205 |
T2204 |
advmod |
below,see |
R1364 |
T2206 |
T2204 |
punct |
),see |
R1365 |
T2207 |
T2195 |
punct |
", ",appear |
R1366 |
T2208 |
T2209 |
det |
the,genes |
R1367 |
T2209 |
T2195 |
nsubj |
genes,appear |
R1368 |
T2210 |
T2209 |
nmod |
trTACC1A,genes |
R1369 |
T2211 |
T2210 |
cc |
and,trTACC1A |
R1370 |
T2212 |
T2210 |
conj |
trTACC1B,trTACC1A |
R1371 |
T2213 |
T2214 |
aux |
to,arisen |
R1372 |
T2214 |
T2195 |
xcomp |
arisen,appear |
R1373 |
T2215 |
T2214 |
aux |
have,arisen |
R1374 |
T2216 |
T2214 |
prep |
from,arisen |
R1375 |
T2217 |
T2218 |
det |
the,duplication |
R1376 |
T2218 |
T2216 |
pobj |
duplication,from |
R1377 |
T2219 |
T2218 |
prep |
of,duplication |
R1378 |
T2220 |
T2221 |
det |
the,segment |
R1379 |
T2221 |
T2219 |
pobj |
segment,of |
R1380 |
T2222 |
T2221 |
amod |
chromosomal,segment |
R1381 |
T2223 |
T2221 |
acl |
containing,segment |
R1382 |
T2224 |
T2225 |
det |
the,ancestor |
R1383 |
T2225 |
T2223 |
dobj |
ancestor,containing |
R1384 |
T2226 |
T2225 |
compound |
teleost,ancestor |
R1385 |
T2227 |
T2225 |
compound |
TACC1,ancestor |
R1386 |
T2228 |
T2218 |
punct |
", ",duplication |
R1387 |
T2229 |
T2218 |
prep |
during,duplication |
R1388 |
T2230 |
T2231 |
det |
the,duplication |
R1389 |
T2231 |
T2229 |
pobj |
duplication,during |
R1390 |
T2232 |
T2231 |
amod |
additional,duplication |
R1391 |
T2233 |
T2231 |
amod |
partial,duplication |
R1392 |
T2234 |
T2231 |
amod |
genomic,duplication |
R1393 |
T2235 |
T2236 |
dep |
that,occurred |
R1394 |
T2236 |
T2231 |
relcl |
occurred,duplication |
R1395 |
T2237 |
T2236 |
prep |
in,occurred |
R1396 |
T2238 |
T2239 |
det |
the,lineage |
R1397 |
T2239 |
T2237 |
pobj |
lineage,in |
R1398 |
T2240 |
T2239 |
compound |
teleost,lineage |
R1399 |
T2241 |
T2195 |
punct |
.,appear |
R1400 |
T2243 |
T2244 |
advmod |
Therefore,support |
R1401 |
T2245 |
T2244 |
punct |
", ",support |
R1402 |
T2246 |
T2247 |
det |
this,analysis |
R1403 |
T2247 |
T2244 |
nsubj |
analysis,support |
R1404 |
T2248 |
T2247 |
prep |
of,analysis |
R1405 |
T2249 |
T2250 |
compound |
T.,rubripes |
R1406 |
T2250 |
T2248 |
pobj |
rubripes,of |
R1407 |
T2251 |
T2244 |
aux |
does,support |
R1408 |
T2252 |
T2244 |
neg |
not,support |
R1409 |
T2253 |
T2254 |
det |
the,hypothesis |
R1410 |
T2254 |
T2244 |
dobj |
hypothesis,support |
R1411 |
T2255 |
T2256 |
mark |
that,included |
R1412 |
T2256 |
T2254 |
acl |
included,hypothesis |
R1413 |
T2257 |
T2258 |
det |
the,region |
R1414 |
T2258 |
T2256 |
nsubjpass |
region,included |
R1415 |
T2259 |
T2258 |
acl |
surrounding,region |
R1416 |
T2260 |
T2261 |
det |
the,ancestor |
R1417 |
T2261 |
T2259 |
dobj |
ancestor,surrounding |
R1418 |
T2262 |
T2261 |
compound |
TACC3,ancestor |
R1419 |
T2263 |
T2256 |
auxpass |
was,included |
R1420 |
T2264 |
T2256 |
prep |
in,included |
R1421 |
T2265 |
T2266 |
det |
the,round |
R1422 |
T2266 |
T2264 |
pobj |
round,in |
R1423 |
T2267 |
T2266 |
amod |
second,round |
R1424 |
T2268 |
T2266 |
prep |
of,round |
R1425 |
T2269 |
T2270 |
nmod |
vertebrate,duplication |
R1426 |
T2270 |
T2268 |
pobj |
duplication,of |
R1427 |
T2271 |
T2270 |
amod |
genomic,duplication |
R1428 |
T2272 |
T2244 |
punct |
.,support |
R1015 |
T1818 |
T1819 |
nsubj |
a,s |
R1016 |
T1836 |
T1835 |
compound |
ra,nch |
R1017 |
T1837 |
T1835 |
prep |
of,nch |
R1018 |
T1838 |
T1837 |
pobj |
life,of |
R1019 |
T1839 |
T1833 |
punct |
", ",identified |
R1020 |
T1840 |
T1841 |
det |
a,gene |
R1021 |
T1841 |
T1833 |
nsubjpass |
gene,identified |
R1022 |
T1842 |
T1841 |
amod |
single,gene |
R1023 |
T1843 |
T1841 |
compound |
TACC,gene |
R1024 |
T1844 |
T1833 |
auxpass |
was,identified |