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PMC:441373 / 4100-4584 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1061 13-23 VBN denotes associated
T1063 5-9 NN denotes gene
T1065 0-4 NN denotes TACC
T1066 10-12 VBZ denotes is
T1067 24-28 IN denotes with
T1068 29-34 NN denotes FGFR4
T1069 35-37 IN denotes in
T1070 38-48 NN denotes vertebrate
T1071 49-56 NNS denotes genomes
T1072 56-57 . denotes .
T1073 57-218 sentence denotes To date, only three active TACC genes have been cloned in humans [1-3], one in each of mouse [7], Xenopus laevis [8], D. melanogaster [4], and C. elegans [5,6].
T1074 58-60 IN denotes To
T1075 130-133 CD denotes one
T1076 61-65 NN denotes date
T1077 65-67 , denotes ,
T1078 67-71 RB denotes only
T1079 90-95 NNS denotes genes
T1080 72-77 CD denotes three
T1081 78-84 JJ denotes active
T1082 85-89 NN denotes TACC
T1083 106-112 VBN denotes cloned
T1084 96-100 VBP denotes have
T1085 101-105 VBN denotes been
T1086 113-115 IN denotes in
T1087 116-122 NNS denotes humans
T1088 123-124 -LRB- denotes [
T1089 124-125 CD denotes 1
T1090 125-126 SYM denotes -
T1091 126-127 CD denotes 3
T1092 127-128 -RRB- denotes ]
T1093 128-130 , denotes ,
T1094 134-136 IN denotes in
T1095 137-141 DT denotes each
T1096 142-144 IN denotes of
T1097 145-150 NN denotes mouse
T1098 151-152 -LRB- denotes [
T1099 152-153 CD denotes 7
T1100 153-154 -RRB- denotes ]
T1101 154-156 , denotes ,
T1102 156-163 NNP denotes Xenopus
T1103 164-170 NNP denotes laevis
T1104 171-172 -LRB- denotes [
T1105 172-173 CD denotes 8
T1106 173-174 -RRB- denotes ]
T1107 174-176 , denotes ,
T1108 176-178 NNP denotes D.
T1109 179-191 NNP denotes melanogaster
T1110 192-193 -LRB- denotes [
T1111 193-194 CD denotes 4
T1112 194-195 -RRB- denotes ]
T1113 195-197 , denotes ,
T1114 197-200 CC denotes and
T1115 201-203 NNP denotes C.
T1116 204-211 NNP denotes elegans
T1117 212-213 -LRB- denotes [
T1118 215-216 CD denotes 6
T1119 213-214 CD denotes 5
T1120 214-215 , denotes ,
T1121 216-217 -RRB- denotes ]
T1122 217-218 . denotes .
T1123 218-437 sentence denotes Although two additional new candidate TACC family members, Oryctolagus cuniculus TACC4 [9] and human RHAMM [10] have been proposed, their true identity and placement in the evolution of the TACC family is under debate.
T1124 219-227 IN denotes Although
T1125 341-349 VBN denotes proposed
T1126 228-231 CD denotes two
T1127 269-276 NNS denotes members
T1128 232-242 JJ denotes additional
T1129 243-246 JJ denotes new
T1130 247-256 NN denotes candidate
T1131 257-261 NN denotes TACC
T1132 262-268 NN denotes family
T1133 276-278 , denotes ,
T1134 278-289 NNP denotes Oryctolagus
T1135 300-305 NN denotes TACC4
T1136 290-299 NNP denotes cuniculus
T1137 306-307 -LRB- denotes [
T1138 307-308 CD denotes 9
T1139 308-309 -RRB- denotes ]
T1140 310-313 CC denotes and
T1141 314-319 JJ denotes human
T1142 320-325 NN denotes RHAMM
T1143 326-327 -LRB- denotes [
T1144 327-329 CD denotes 10
T1145 329-330 -RRB- denotes ]
T1146 331-335 VBP denotes have
T1147 336-340 VBN denotes been
T1148 421-423 VBZ denotes is
T1149 349-351 , denotes ,
T1150 351-356 PRP$ denotes their
T1151 362-370 NN denotes identity
T1152 357-361 JJ denotes true
T1153 371-374 CC denotes and
T1154 375-384 NN denotes placement
T1155 385-387 IN denotes in
T1156 388-391 DT denotes the
T1157 392-401 NN denotes evolution
T1158 402-404 IN denotes of
T1159 405-408 DT denotes the
T1160 414-420 NN denotes family
T1161 409-413 NN denotes TACC
T1162 424-429 IN denotes under
T1163 430-436 NN denotes debate
T1164 436-437 . denotes .
T1166 438-442 RB denotes Thus
T1168 442-444 , denotes ,
T1169 444-447 DT denotes the
T1170 448-462 NN denotes identification
T1171 463-466 CC denotes and
T1172 467-477 JJ denotes functional
R657 T1063 T1061 nsubjpass gene,associated
R659 T1065 T1063 compound TACC,gene
R660 T1066 T1061 auxpass is,associated
R661 T1067 T1061 prep with,associated
R662 T1068 T1067 pobj FGFR4,with
R663 T1069 T1061 prep in,associated
R664 T1070 T1071 compound vertebrate,genomes
R665 T1071 T1069 pobj genomes,in
R667 T1074 T1075 prep To,one
R668 T1076 T1074 pobj date,To
R669 T1077 T1075 punct ", ",one
R670 T1078 T1079 advmod only,genes
R671 T1079 T1083 nsubjpass genes,cloned
R672 T1080 T1079 nummod three,genes
R673 T1081 T1079 amod active,genes
R674 T1082 T1079 compound TACC,genes
R675 T1083 T1075 ccomp cloned,one
R676 T1084 T1083 aux have,cloned
R677 T1085 T1083 auxpass been,cloned
R678 T1086 T1083 prep in,cloned
R679 T1087 T1086 pobj humans,in
R680 T1088 T1089 punct [,1
R681 T1089 T1083 parataxis 1,cloned
R682 T1090 T1091 punct -,3
R683 T1091 T1089 prep 3,1
R684 T1092 T1089 punct ],1
R685 T1093 T1075 punct ", ",one
R686 T1094 T1075 prep in,one
R687 T1095 T1094 pobj each,in
R688 T1096 T1095 prep of,each
R689 T1097 T1096 pobj mouse,of
R690 T1098 T1099 punct [,7
R691 T1099 T1097 parataxis 7,mouse
R692 T1100 T1099 punct ],7
R693 T1101 T1097 punct ", ",mouse
R694 T1102 T1103 compound Xenopus,laevis
R695 T1103 T1097 conj laevis,mouse
R696 T1104 T1105 punct [,8
R697 T1105 T1103 parataxis 8,laevis
R698 T1106 T1105 punct ],8
R699 T1107 T1103 punct ", ",laevis
R700 T1108 T1109 compound D.,melanogaster
R701 T1109 T1103 conj melanogaster,laevis
R702 T1110 T1111 punct [,4
R703 T1111 T1109 parataxis 4,melanogaster
R704 T1112 T1111 punct ],4
R705 T1113 T1109 punct ", ",melanogaster
R706 T1114 T1109 cc and,melanogaster
R707 T1115 T1116 compound C.,elegans
R708 T1116 T1109 conj elegans,melanogaster
R709 T1117 T1118 punct [,6
R710 T1118 T1116 parataxis 6,elegans
R711 T1119 T1118 nummod 5,6
R712 T1120 T1118 punct ",",6
R713 T1121 T1118 punct ],6
R714 T1122 T1075 punct .,one
R715 T1124 T1125 mark Although,proposed
R716 T1125 T1148 advcl proposed,is
R717 T1126 T1127 nummod two,members
R718 T1127 T1125 nsubjpass members,proposed
R719 T1128 T1127 amod additional,members
R720 T1129 T1127 amod new,members
R721 T1130 T1127 compound candidate,members
R722 T1131 T1127 compound TACC,members
R723 T1132 T1127 compound family,members
R724 T1133 T1127 punct ", ",members
R725 T1134 T1135 compound Oryctolagus,TACC4
R726 T1135 T1127 appos TACC4,members
R727 T1136 T1135 compound cuniculus,TACC4
R728 T1137 T1138 punct [,9
R729 T1138 T1135 parataxis 9,TACC4
R730 T1139 T1138 punct ],9
R731 T1140 T1135 cc and,TACC4
R732 T1141 T1142 amod human,RHAMM
R733 T1142 T1135 conj RHAMM,TACC4
R734 T1143 T1144 punct [,10
R735 T1144 T1142 parataxis 10,RHAMM
R736 T1145 T1144 punct ],10
R737 T1146 T1125 aux have,proposed
R738 T1147 T1125 auxpass been,proposed
R739 T1149 T1148 punct ", ",is
R740 T1150 T1151 poss their,identity
R741 T1151 T1148 nsubj identity,is
R742 T1152 T1151 amod true,identity
R743 T1153 T1151 cc and,identity
R744 T1154 T1151 conj placement,identity
R745 T1155 T1151 prep in,identity
R746 T1156 T1157 det the,evolution
R747 T1157 T1155 pobj evolution,in
R748 T1158 T1157 prep of,evolution
R749 T1159 T1160 det the,family
R750 T1160 T1158 pobj family,of
R751 T1161 T1160 compound TACC,family
R752 T1162 T1148 prep under,is
R753 T1163 T1162 pobj debate,under
R754 T1164 T1148 punct .,is
R757 T1169 T1170 det the,identification
R759 T1171 T1170 cc and,identification

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T684 5-9 SO_EXT:0000704 denotes gene
T685 29-34 PR_EXT:000001451 denotes FGFR4
T686 38-48 NCBITaxon:7742 denotes vertebrate
T687 49-56 SO_EXT:0001026 denotes genomes
T688 90-95 SO_EXT:0000704 denotes genes
T689 106-112 SO_EXT:sequence_cloning_process denotes cloned
T690 116-122 NCBITaxon:9606 denotes humans
T691 145-150 NCBITaxon:10088 denotes mouse
T692 156-170 NCBITaxon:8355 denotes Xenopus laevis
T693 176-191 NCBITaxon:7227 denotes D. melanogaster
T694 201-211 NCBITaxon:6239 denotes C. elegans
T695 278-299 NCBITaxon:9986 denotes Oryctolagus cuniculus
T696 314-319 NCBITaxon:9606 denotes human
T697 320-325 PR_EXT:000001856 denotes RHAMM

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T608 5-9 SO:0000704 denotes gene
T609 29-34 PR:000001451 denotes FGFR4
T610 38-48 NCBITaxon:7742 denotes vertebrate
T611 49-56 SO:0001026 denotes genomes
T612 90-95 SO:0000704 denotes genes
T613 116-122 NCBITaxon:9606 denotes humans
T614 145-150 NCBITaxon:10088 denotes mouse
T615 156-170 NCBITaxon:8355 denotes Xenopus laevis
T616 176-191 NCBITaxon:7227 denotes D. melanogaster
T617 201-211 NCBITaxon:6239 denotes C. elegans
T618 278-299 NCBITaxon:9986 denotes Oryctolagus cuniculus
T619 314-319 NCBITaxon:9606 denotes human
T620 320-325 PR:000001856 denotes RHAMM

2_test

Id Subject Object Predicate Lexical cue
15207008-10435627-9665984 124-125 10435627 denotes 1
15207008-10366448-9665984 124-125 10366448 denotes 1
15207008-12620397-9665984 124-125 12620397 denotes 1
15207008-11025203-9665985 152-153 11025203 denotes 7
15207008-10635326-9665986 172-173 10635326 denotes 8
15207008-10637228-9665987 193-194 10637228 denotes 4
15207008-12956952-9665988 213-214 12956952 denotes 5
15207008-12956951-9665989 215-216 12956951 denotes 6
15207008-12015314-9665990 307-308 12015314 denotes 9
15207008-12808028-9665991 327-329 12808028 denotes 10