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Id Subject Object Predicate Lexical cue
T8332 0-10 NN denotes Comparison
T8333 11-13 IN denotes of
T8334 14-21 VBN denotes modeled
T8335 22-26 IN denotes with
T8336 27-41 RB denotes experimentally
T8337 42-49 VBN denotes defined
T8338 50-62 NNS denotes interactions
T8339 63-65 IN denotes of
T8340 66-69 DT denotes the
T8341 86-94 NN denotes proteins
T8342 70-80 NN denotes vertebrate
T8343 81-85 NN denotes TACC
T8344 94-222 sentence denotes The interaction data for the vertebrate TACCs is relatively limited; however, interaction networks are now beginning to emerge.
T8345 95-98 DT denotes The
T8346 111-115 NNS denotes data
T8347 99-110 NN denotes interaction
T8348 141-143 VBZ denotes is
T8349 116-119 IN denotes for
T8350 120-123 DT denotes the
T8351 135-140 NNS denotes TACCs
T8352 124-134 NN denotes vertebrate
T8353 202-211 VBG denotes beginning
T8354 144-154 RB denotes relatively
T8355 155-162 VBN denotes limited
T8356 162-163 : denotes ;
T8357 164-171 RB denotes however
T8358 171-173 , denotes ,
T8359 173-184 NN denotes interaction
T8360 185-193 NNS denotes networks
T8361 194-197 VBP denotes are
T8362 198-201 RB denotes now
T8363 212-214 TO denotes to
T8364 215-221 VB denotes emerge
T8365 221-222 . denotes .
T8366 222-408 sentence denotes The results of our functional analysis, as well as other published data clearly indicate that the vertebrate TACCs interact with proteins that can be divided into two broad categories:
T8367 223-226 DT denotes The
T8368 227-234 NNS denotes results
T8369 303-311 VBP denotes indicate
T8370 235-237 IN denotes of
T8371 238-241 PRP$ denotes our
T8372 253-261 NN denotes analysis
T8373 242-252 JJ denotes functional
T8374 261-263 , denotes ,
T8375 263-265 RB denotes as
T8376 271-273 IN denotes as
T8377 266-270 RB denotes well
T8378 274-279 JJ denotes other
T8379 290-294 NNS denotes data
T8380 280-289 VBN denotes published
T8381 295-302 RB denotes clearly
T8382 312-316 IN denotes that
T8383 338-346 VBP denotes interact
T8384 317-320 DT denotes the
T8385 332-337 NNS denotes TACCs
T8386 321-331 NN denotes vertebrate
T8387 347-351 IN denotes with
T8388 352-360 NN denotes proteins
T8389 361-365 WDT denotes that
T8390 373-380 VBN denotes divided
T8391 366-369 MD denotes can
T8392 370-372 VB denotes be
T8393 381-385 IN denotes into
T8394 386-389 CD denotes two
T8395 396-406 NNS denotes categories
T8396 390-395 JJ denotes broad
T8397 406-408 : denotes :
T8398 408-409 LS denotes 1
T8399 411-419 NN denotes proteins
T8400 408-628 sentence denotes 1) proteins with roles in centrosome/mitotic spindle dynamics, and 2) proteins involved in gene regulation, either at the level of transcription, or subsequent RNA processing and translation [3,5-7,15,19-21,24,25,33,34].
T8401 409-410 -RRB- denotes )
T8402 420-424 IN denotes with
T8403 425-430 NNS denotes roles
T8404 431-433 IN denotes in
T8405 434-444 NN denotes centrosome
T8406 445-452 JJ denotes mitotic
T8407 444-445 HYPH denotes /
T8408 453-460 NN denotes spindle
T8409 461-469 NNS denotes dynamics
T8410 469-471 , denotes ,
T8411 471-474 CC denotes and
T8412 475-476 LS denotes 2
T8413 478-486 NN denotes proteins
T8414 476-477 -RRB- denotes )
T8415 487-495 VBN denotes involved
T8416 496-498 IN denotes in
T8417 499-503 NN denotes gene
T8418 504-514 NN denotes regulation
T8419 514-516 , denotes ,
T8420 516-522 CC denotes either
T8421 523-525 IN denotes at
T8422 526-529 DT denotes the
T8423 530-535 NN denotes level
T8424 536-538 IN denotes of
T8425 539-552 NN denotes transcription
T8426 552-554 , denotes ,
T8427 554-556 CC denotes or
T8428 557-567 JJ denotes subsequent
T8429 572-582 NN denotes processing
T8430 568-571 NN denotes RNA
T8431 583-586 CC denotes and
T8432 587-598 NN denotes translation
T8433 599-600 -LRB- denotes [
T8434 600-601 CD denotes 3
T8435 601-602 , denotes ,
T8436 602-603 CD denotes 5
T8437 603-604 SYM denotes -
T8438 604-605 CD denotes 7
T8439 605-606 , denotes ,
T8440 606-608 CD denotes 15
T8441 608-609 , denotes ,
T8442 609-611 CD denotes 19
T8443 611-612 SYM denotes -
T8444 612-614 CD denotes 21
T8445 614-615 , denotes ,
T8446 615-617 CD denotes 24
T8447 617-618 , denotes ,
T8448 618-620 CD denotes 25
T8449 620-621 , denotes ,
T8450 621-623 CD denotes 33
T8451 623-624 , denotes ,
T8452 624-626 CD denotes 34
T8453 626-627 -RRB- denotes ]
T8454 627-628 . denotes .
T8455 628-783 sentence denotes Many of these proteins do not appear to interact directly with the protostome TACCs, but would be expected to be in the same protein complex (Fig. 6C,6D).
T8456 629-633 JJ denotes Many
T8457 659-665 VB denotes appear
T8458 634-636 IN denotes of
T8459 637-642 DT denotes these
T8460 643-651 NN denotes proteins
T8461 652-654 VBP denotes do
T8462 655-658 RB denotes not
T8463 666-668 TO denotes to
T8464 669-677 VB denotes interact
T8465 678-686 RB denotes directly
T8466 687-691 IN denotes with
T8467 692-695 DT denotes the
T8468 707-712 NNS denotes TACCs
T8469 696-706 NN denotes protostome
T8470 712-714 , denotes ,
T8471 714-717 CC denotes but
T8472 718-723 MD denotes would
T8473 727-735 VBN denotes expected
T8474 724-726 VB denotes be
T8475 736-738 TO denotes to
T8476 739-741 VB denotes be
T8477 742-744 IN denotes in
T8478 745-748 DT denotes the
T8479 762-769 NN denotes complex
T8480 749-753 JJ denotes same
T8481 754-761 NN denotes protein
T8482 770-771 -LRB- denotes (
T8483 779-781 CD denotes 6D
T8484 771-775 NN denotes Fig.
T8485 776-778 CD denotes 6C
T8486 778-779 , denotes ,
T8487 781-782 -RRB- denotes )
T8488 782-783 . denotes .
T8489 783-954 sentence denotes Significant analysis of the association of the TACCs with the centrosome and the dynamics of mitotic spindle assembly from yeast to humans has been published [5,6,21-24].
T8490 784-795 JJ denotes Significant
T8491 796-804 NN denotes analysis
T8492 932-941 VBN denotes published
T8493 805-807 IN denotes of
T8494 808-811 DT denotes the
T8495 812-823 NN denotes association
T8496 824-826 IN denotes of
T8497 827-830 DT denotes the
T8498 831-836 NNS denotes TACCs
T8499 837-841 IN denotes with
T8500 842-845 DT denotes the
T8501 846-856 NN denotes centrosome
T8502 857-860 CC denotes and
T8503 861-864 DT denotes the
T8504 865-873 NNS denotes dynamics
T8505 874-876 IN denotes of
T8506 877-884 JJ denotes mitotic
T8507 885-892 NN denotes spindle
T8508 893-901 NN denotes assembly
T8509 902-906 IN denotes from
T8510 907-912 NN denotes yeast
T8511 913-915 IN denotes to
T8512 916-922 NNS denotes humans
T8513 923-926 VBZ denotes has
T8514 927-931 VBN denotes been
T8515 942-943 -LRB- denotes [
T8516 943-944 CD denotes 5
T8517 944-945 , denotes ,
T8518 945-946 CD denotes 6
T8519 946-947 , denotes ,
T8520 947-949 CD denotes 21
T8521 949-950 SYM denotes -
T8522 950-952 CD denotes 24
T8523 952-953 -RRB- denotes ]
T8524 953-954 . denotes .
T8525 954-1274 sentence denotes From this analysis, it seems likely that the vertebrate TACC3 protein has retained this direct ancestral function, based upon its location in these structures during mitosis [27], its strong interaction with Aurora Kinase A, and the observation that it is the only human TACC protein phosphorylated by this enzyme [21].
T8526 955-959 IN denotes From
T8527 978-983 VBZ denotes seems
T8528 960-964 DT denotes this
T8529 965-973 NN denotes analysis
T8530 973-975 , denotes ,
T8531 975-977 PRP denotes it
T8532 984-990 JJ denotes likely
T8533 991-995 IN denotes that
T8534 1029-1037 VBN denotes retained
T8535 996-999 DT denotes the
T8536 1017-1024 NN denotes protein
T8537 1000-1010 NN denotes vertebrate
T8538 1011-1016 NN denotes TACC3
T8539 1025-1028 VBZ denotes has
T8540 1038-1042 DT denotes this
T8541 1060-1068 NN denotes function
T8542 1043-1049 JJ denotes direct
T8543 1050-1059 JJ denotes ancestral
T8544 1068-1070 , denotes ,
T8545 1070-1075 VBN denotes based
T8546 1076-1080 IN denotes upon
T8547 1081-1084 PRP$ denotes its
T8548 1085-1093 NN denotes location
T8549 1094-1096 IN denotes in
T8550 1097-1102 DT denotes these
T8551 1103-1113 NNS denotes structures
T8552 1114-1120 IN denotes during
T8553 1121-1128 NN denotes mitosis
T8554 1129-1130 -LRB- denotes [
T8555 1130-1132 CD denotes 27
T8556 1132-1133 -RRB- denotes ]
T8557 1133-1135 , denotes ,
T8558 1135-1138 PRP$ denotes its
T8559 1146-1157 NN denotes interaction
T8560 1139-1145 JJ denotes strong
T8561 1158-1162 IN denotes with
T8562 1163-1169 NN denotes Aurora
T8563 1177-1178 NN denotes A
T8564 1170-1176 NN denotes Kinase
T8565 1178-1180 , denotes ,
T8566 1180-1183 CC denotes and
T8567 1184-1187 DT denotes the
T8568 1188-1199 NN denotes observation
T8569 1200-1204 IN denotes that
T8570 1208-1210 VBZ denotes is
T8571 1205-1207 PRP denotes it
T8572 1211-1214 DT denotes the
T8573 1231-1238 NN denotes protein
T8574 1215-1219 RB denotes only
T8575 1220-1225 JJ denotes human
T8576 1226-1230 NN denotes TACC
T8577 1239-1253 VBN denotes phosphorylated
T8578 1254-1256 IN denotes by
T8579 1257-1261 DT denotes this
T8580 1262-1268 NN denotes enzyme
T8581 1269-1270 -LRB- denotes [
T8582 1270-1272 CD denotes 21
T8583 1272-1273 -RRB- denotes ]
T8584 1273-1274 . denotes .
T8585 1274-1458 sentence denotes However, the variability of the central domain of the vertebrate orthologues, suggests that TACC3 may also have acquired additional, and in some instances, species-specific functions.
T8586 1275-1282 RB denotes However
T8587 1353-1361 VBZ denotes suggests
T8588 1282-1284 , denotes ,
T8589 1284-1287 DT denotes the
T8590 1288-1299 NN denotes variability
T8591 1300-1302 IN denotes of
T8592 1303-1306 DT denotes the
T8593 1315-1321 NN denotes domain
T8594 1307-1314 JJ denotes central
T8595 1322-1324 IN denotes of
T8596 1325-1328 DT denotes the
T8597 1340-1351 NNS denotes orthologues
T8598 1329-1339 NN denotes vertebrate
T8599 1351-1353 , denotes ,
T8600 1362-1366 IN denotes that
T8601 1387-1395 VBN denotes acquired
T8602 1367-1372 NN denotes TACC3
T8603 1373-1376 MD denotes may
T8604 1377-1381 RB denotes also
T8605 1382-1386 VB denotes have
T8606 1396-1406 JJ denotes additional
T8607 1448-1457 NNS denotes functions
T8608 1406-1408 , denotes ,
T8609 1408-1411 CC denotes and
T8610 1412-1414 IN denotes in
T8611 1439-1447 JJ denotes specific
T8612 1415-1419 DT denotes some
T8613 1420-1429 NNS denotes instances
T8614 1429-1431 , denotes ,
T8615 1431-1438 NN denotes species
T8616 1438-1439 HYPH denotes -
T8617 1457-1458 . denotes .
T8618 1458-1668 sentence denotes For instance, in X. laevis, the maskin protein has acquired a binding site for the eIF4E protein, and thus a function in the coordinated control of polyadenylation and translation in the Xenopus oocyte [8,35].
T8619 1459-1462 IN denotes For
T8620 1510-1518 VBN denotes acquired
T8621 1463-1471 NN denotes instance
T8622 1471-1473 , denotes ,
T8623 1473-1475 IN denotes in
T8624 1476-1478 NNP denotes X.
T8625 1479-1485 NNP denotes laevis
T8626 1485-1487 , denotes ,
T8627 1487-1490 DT denotes the
T8628 1498-1505 NN denotes protein
T8629 1491-1497 NN denotes maskin
T8630 1506-1509 VBZ denotes has
T8631 1519-1520 DT denotes a
T8632 1529-1533 NN denotes site
T8633 1521-1528 NN denotes binding
T8634 1534-1537 IN denotes for
T8635 1538-1541 DT denotes the
T8636 1548-1555 NN denotes protein
T8637 1542-1547 NN denotes eIF4E
T8638 1555-1557 , denotes ,
T8639 1557-1560 CC denotes and
T8640 1561-1565 RB denotes thus
T8641 1568-1576 NN denotes function
T8642 1566-1567 DT denotes a
T8643 1577-1579 IN denotes in
T8644 1580-1583 DT denotes the
T8645 1596-1603 NN denotes control
T8646 1584-1595 VBN denotes coordinated
T8647 1604-1606 IN denotes of
T8648 1607-1622 NN denotes polyadenylation
T8649 1623-1626 CC denotes and
T8650 1627-1638 NN denotes translation
T8651 1639-1641 IN denotes in
T8652 1642-1645 DT denotes the
T8653 1654-1660 NN denotes oocyte
T8654 1646-1653 NNP denotes Xenopus
T8655 1661-1662 -LRB- denotes [
T8656 1664-1666 CD denotes 35
T8657 1662-1663 CD denotes 8
T8658 1663-1664 , denotes ,
T8659 1666-1667 -RRB- denotes ]
T8660 1667-1668 . denotes .
T8661 1668-1922 sentence denotes A recent study has suggested that this function may be unique to maskin: although it is unclear whether the other vertebrate TACC3 proteins interact with the eIF4E/CPEB complex, the human TACC1A isoform is unable to interact with the eIF4E/CPEB complex.
T8662 1669-1670 DT denotes A
T8663 1678-1683 NN denotes study
T8664 1671-1677 JJ denotes recent
T8665 1688-1697 VBN denotes suggested
T8666 1684-1687 VBZ denotes has
T8667 1872-1874 VBZ denotes is
T8668 1698-1702 IN denotes that
T8669 1721-1723 VB denotes be
T8670 1703-1707 DT denotes this
T8671 1708-1716 NN denotes function
T8672 1717-1720 MD denotes may
T8673 1724-1730 JJ denotes unique
T8674 1731-1733 IN denotes to
T8675 1734-1740 NN denotes maskin
T8676 1740-1742 : denotes :
T8677 1742-1750 IN denotes although
T8678 1754-1756 VBZ denotes is
T8679 1751-1753 PRP denotes it
T8680 1757-1764 JJ denotes unclear
T8681 1765-1772 IN denotes whether
T8682 1809-1817 VBP denotes interact
T8683 1773-1776 DT denotes the
T8684 1800-1808 NN denotes proteins
T8685 1777-1782 JJ denotes other
T8686 1783-1793 NN denotes vertebrate
T8687 1794-1799 NN denotes TACC3
T8688 1818-1822 IN denotes with
T8689 1823-1826 DT denotes the
T8690 1838-1845 NN denotes complex
T8691 1827-1832 NN denotes eIF4E
T8692 1833-1837 NN denotes CPEB
T8693 1832-1833 HYPH denotes /
T8694 1845-1847 , denotes ,
T8695 1847-1850 DT denotes the
T8696 1864-1871 NN denotes isoform
T8697 1851-1856 JJ denotes human
T8698 1857-1863 NN denotes TACC1A
T8699 1875-1881 JJ denotes unable
T8700 1882-1884 TO denotes to
T8701 1885-1893 VB denotes interact
T8702 1894-1898 IN denotes with
T8703 1899-1902 DT denotes the
T8704 1914-1921 NN denotes complex
T8705 1903-1908 NN denotes eIF4E
T8706 1909-1913 NN denotes CPEB
T8707 1908-1909 HYPH denotes /
T8708 1921-1922 . denotes .
T8709 1922-2085 sentence denotes Instead, some TACC1 isoforms have evolved a related, but distinct function by directly interacting with elements of the RNA splicing and transport machinery [19].
T8710 1923-1930 RB denotes Instead
T8711 1957-1964 VBN denotes evolved
T8712 1930-1932 , denotes ,
T8713 1932-1936 DT denotes some
T8714 1943-1951 NNS denotes isoforms
T8715 1937-1942 NN denotes TACC1
T8716 1952-1956 VBP denotes have
T8717 1965-1966 DT denotes a
T8718 1989-1997 NN denotes function
T8719 1967-1974 JJ denotes related
T8720 1974-1976 , denotes ,
T8721 1976-1979 CC denotes but
T8722 1980-1988 JJ denotes distinct
T8723 1998-2000 IN denotes by
T8724 2001-2009 RB denotes directly
T8725 2010-2021 VBG denotes interacting
T8726 2022-2026 IN denotes with
T8727 2027-2035 NNS denotes elements
T8728 2036-2038 IN denotes of
T8729 2039-2042 DT denotes the
T8730 2070-2079 NN denotes machinery
T8731 2043-2046 NN denotes RNA
T8732 2047-2055 NN denotes splicing
T8733 2056-2059 CC denotes and
T8734 2060-2069 NN denotes transport
T8735 2080-2081 -LRB- denotes [
T8736 2081-2083 CD denotes 19
T8737 2083-2084 -RRB- denotes ]
T8738 2084-2085 . denotes .
T8739 2085-2279 sentence denotes To further characterize the evolving functions of the TACC proteins, we have used an unbiased yeast two hybrid screening method to identify proteins that bind to the human TACC proteins [3,34].
T8740 2086-2088 TO denotes To
T8741 2097-2109 VB denotes characterize
T8742 2089-2096 RB denotes further
T8743 2163-2167 VBN denotes used
T8744 2110-2113 DT denotes the
T8745 2123-2132 NNS denotes functions
T8746 2114-2122 VBG denotes evolving
T8747 2133-2135 IN denotes of
T8748 2136-2139 DT denotes the
T8749 2145-2153 NN denotes proteins
T8750 2140-2144 NN denotes TACC
T8751 2153-2155 , denotes ,
T8752 2155-2157 PRP denotes we
T8753 2158-2162 VBP denotes have
T8754 2168-2170 DT denotes an
T8755 2207-2213 NN denotes method
T8756 2171-2179 JJ denotes unbiased
T8757 2180-2185 NN denotes yeast
T8758 2186-2189 CD denotes two
T8759 2190-2196 NN denotes hybrid
T8760 2197-2206 NN denotes screening
T8761 2214-2216 TO denotes to
T8762 2217-2225 VB denotes identify
T8763 2226-2234 NN denotes proteins
T8764 2235-2239 WDT denotes that
T8765 2240-2244 VBP denotes bind
T8766 2245-2247 IN denotes to
T8767 2248-2251 DT denotes the
T8768 2263-2271 NN denotes proteins
T8769 2252-2257 JJ denotes human
T8770 2258-2262 NN denotes TACC
T8771 2272-2273 -LRB- denotes [
T8772 2275-2277 CD denotes 34
T8773 2273-2274 CD denotes 3
T8774 2274-2275 , denotes ,
T8775 2277-2278 -RRB- denotes ]
T8776 2278-2279 . denotes .
T8777 2279-2541 sentence denotes In a screen of a MATCHMAKER fetal brain library (BD Biosciences Clontech), in addition to isolating the histone acetyltransferase hGCN5L2 [34], we also identified the β3 isoform of retinoid-X receptor β as a protein that interacts with the TACC domain of TACC2.
T8778 2280-2282 IN denotes In
T8779 2432-2442 VBD denotes identified
T8780 2283-2284 DT denotes a
T8781 2285-2291 NN denotes screen
T8782 2292-2294 IN denotes of
T8783 2295-2296 DT denotes a
T8784 2320-2327 NN denotes library
T8785 2297-2307 NN denotes MATCHMAKER
T8786 2308-2313 JJ denotes fetal
T8787 2314-2319 NN denotes brain
T8788 2328-2329 -LRB- denotes (
T8789 2344-2352 NNP denotes Clontech
T8790 2329-2331 NNP denotes BD
T8791 2332-2343 NNPS denotes Biosciences
T8792 2352-2353 -RRB- denotes )
T8793 2353-2355 , denotes ,
T8794 2355-2357 IN denotes in
T8795 2358-2366 NN denotes addition
T8796 2367-2369 IN denotes to
T8797 2370-2379 VBG denotes isolating
T8798 2380-2383 DT denotes the
T8799 2392-2409 NN denotes acetyltransferase
T8800 2384-2391 NN denotes histone
T8801 2410-2417 NN denotes hGCN5L2
T8802 2418-2419 -LRB- denotes [
T8803 2419-2421 CD denotes 34
T8804 2421-2422 -RRB- denotes ]
T8805 2422-2424 , denotes ,
T8806 2424-2426 PRP denotes we
T8807 2427-2431 RB denotes also
T8808 2443-2446 DT denotes the
T8809 2450-2457 NN denotes isoform
T8810 2447-2449 NN denotes β3
T8811 2458-2460 IN denotes of
T8812 2461-2469 NN denotes retinoid
T8813 2470-2471 NN denotes X
T8814 2469-2470 HYPH denotes -
T8815 2481-2482 NN denotes β
T8816 2472-2480 NN denotes receptor
T8817 2483-2485 IN denotes as
T8818 2486-2487 DT denotes a
T8819 2488-2495 NN denotes protein
T8820 2496-2500 WDT denotes that
T8821 2501-2510 VBZ denotes interacts
T8822 2511-2515 IN denotes with
T8823 2516-2519 DT denotes the
T8824 2525-2531 NN denotes domain
T8825 2520-2524 NN denotes TACC
T8826 2532-2534 IN denotes of
T8827 2535-2540 NN denotes TACC2
T8828 2540-2541 . denotes .
T8829 2541-2627 sentence denotes As shown in Fig. 7, this interaction is confirmed in vitro by GST-pull down analysis.
T8830 2542-2544 IN denotes As
T8831 2545-2550 VBN denotes shown
T8832 2582-2591 VBN denotes confirmed
T8833 2551-2553 IN denotes in
T8834 2554-2558 NN denotes Fig.
T8835 2559-2560 CD denotes 7
T8836 2560-2562 , denotes ,
T8837 2562-2566 DT denotes this
T8838 2567-2578 NN denotes interaction
T8839 2579-2581 VBZ denotes is
T8840 2592-2594 FW denotes in
T8841 2595-2600 FW denotes vitro
T8842 2601-2603 IN denotes by
T8843 2604-2607 NN denotes GST
T8844 2608-2612 VB denotes pull
T8845 2607-2608 HYPH denotes -
T8846 2618-2626 NN denotes analysis
T8847 2613-2617 RP denotes down
T8848 2626-2627 . denotes .
T8849 2627-2796 sentence denotes Significantly, RXRβ is a close family relative of the nuclear hormone receptor, nhr-86, from C. elegans, which interacts with the ceTAC binding protein lin36 (Fig. 6A).
T8850 2628-2641 RB denotes Significantly
T8851 2648-2650 VBZ denotes is
T8852 2641-2643 , denotes ,
T8853 2643-2647 NN denotes RXRβ
T8854 2651-2652 DT denotes a
T8855 2659-2665 NN denotes family
T8856 2653-2658 JJ denotes close
T8857 2666-2674 JJ denotes relative
T8858 2675-2677 IN denotes of
T8859 2678-2681 DT denotes the
T8860 2698-2706 NN denotes receptor
T8861 2682-2689 JJ denotes nuclear
T8862 2690-2697 NN denotes hormone
T8863 2706-2708 , denotes ,
T8864 2708-2711 NN denotes nhr
T8865 2711-2712 HYPH denotes -
T8866 2712-2714 CD denotes 86
T8867 2714-2716 , denotes ,
T8868 2716-2720 IN denotes from
T8869 2721-2723 NNP denotes C.
T8870 2724-2731 NNP denotes elegans
T8871 2731-2733 , denotes ,
T8872 2733-2738 WDT denotes which
T8873 2739-2748 VBZ denotes interacts
T8874 2749-2753 IN denotes with
T8875 2754-2757 DT denotes the
T8876 2772-2779 NN denotes protein
T8877 2758-2763 NN denotes ceTAC
T8878 2764-2771 NN denotes binding
T8879 2780-2785 NN denotes lin36
T8880 2786-2787 -LRB- denotes (
T8881 2787-2791 NN denotes Fig.
T8882 2792-2794 CD denotes 6A
T8883 2794-2795 -RRB- denotes )
T8884 2795-2796 . denotes .
T8885 2796-3061 sentence denotes This suggests that while protostome TACCs may require additional protein factors to interact with such components, the TACCs in higher organisms may have evolved the ability to directly interact with some of the proteins in the predicted interaction map (Fig. 6E).
T8886 2797-2801 DT denotes This
T8887 2802-2810 VBZ denotes suggests
T8888 2811-2815 IN denotes that
T8889 2951-2958 VBN denotes evolved
T8890 2816-2821 IN denotes while
T8891 2843-2850 VB denotes require
T8892 2822-2832 NN denotes protostome
T8893 2833-2838 NNS denotes TACCs
T8894 2839-2842 MD denotes may
T8895 2851-2861 JJ denotes additional
T8896 2870-2877 NNS denotes factors
T8897 2862-2869 NN denotes protein
T8898 2878-2880 TO denotes to
T8899 2881-2889 VB denotes interact
T8900 2890-2894 IN denotes with
T8901 2895-2899 JJ denotes such
T8902 2900-2910 NNS denotes components
T8903 2910-2912 , denotes ,
T8904 2912-2915 DT denotes the
T8905 2916-2921 NNS denotes TACCs
T8906 2922-2924 IN denotes in
T8907 2925-2931 JJR denotes higher
T8908 2932-2941 NNS denotes organisms
T8909 2942-2945 MD denotes may
T8910 2946-2950 VB denotes have
T8911 2959-2962 DT denotes the
T8912 2963-2970 NN denotes ability
T8913 2971-2973 TO denotes to
T8914 2983-2991 VB denotes interact
T8915 2974-2982 RB denotes directly
T8916 2992-2996 IN denotes with
T8917 2997-3001 DT denotes some
T8918 3002-3004 IN denotes of
T8919 3005-3008 DT denotes the
T8920 3009-3017 NN denotes proteins
T8921 3018-3020 IN denotes in
T8922 3021-3024 DT denotes the
T8923 3047-3050 NN denotes map
T8924 3025-3034 VBN denotes predicted
T8925 3035-3046 NN denotes interaction
T8926 3051-3052 -LRB- denotes (
T8927 3052-3056 NN denotes Fig.
T8928 3057-3059 CD denotes 6E
T8929 3059-3060 -RRB- denotes )
T8930 3060-3061 . denotes .
T8931 3061-3186 sentence denotes Indeed, this appears to be directly linked to the acquisition of new domains and duplication of the chordate TACC precursor.
T8932 3062-3068 RB denotes Indeed
T8933 3075-3082 VBZ denotes appears
T8934 3068-3070 , denotes ,
T8935 3070-3074 DT denotes this
T8936 3083-3085 TO denotes to
T8937 3098-3104 VBN denotes linked
T8938 3086-3088 VB denotes be
T8939 3089-3097 RB denotes directly
T8940 3105-3107 IN denotes to
T8941 3108-3111 DT denotes the
T8942 3112-3123 NN denotes acquisition
T8943 3124-3126 IN denotes of
T8944 3127-3130 JJ denotes new
T8945 3131-3138 NNS denotes domains
T8946 3139-3142 CC denotes and
T8947 3143-3154 NN denotes duplication
T8948 3155-3157 IN denotes of
T8949 3158-3161 DT denotes the
T8950 3176-3185 NN denotes precursor
T8951 3162-3170 NN denotes chordate
T8952 3171-3175 NN denotes TACC
T8953 3185-3186 . denotes .
T8954 3186-3367 sentence denotes In fact, the first identified function of a vertebrate TACC protein was as a transcriptional coactivator acting through a direct interaction with the ARNT transcription factor [7].
T8955 3187-3189 IN denotes In
T8956 3255-3258 VBD denotes was
T8957 3190-3194 NN denotes fact
T8958 3194-3196 , denotes ,
T8959 3196-3199 DT denotes the
T8960 3217-3225 NN denotes function
T8961 3200-3205 JJ denotes first
T8962 3206-3216 VBN denotes identified
T8963 3226-3228 IN denotes of
T8964 3229-3230 DT denotes a
T8965 3247-3254 NN denotes protein
T8966 3231-3241 NN denotes vertebrate
T8967 3242-3246 NN denotes TACC
T8968 3259-3261 IN denotes as
T8969 3262-3263 DT denotes a
T8970 3280-3291 NN denotes coactivator
T8971 3264-3279 JJ denotes transcriptional
T8972 3292-3298 VBG denotes acting
T8973 3299-3306 IN denotes through
T8974 3307-3308 DT denotes a
T8975 3316-3327 NN denotes interaction
T8976 3309-3315 JJ denotes direct
T8977 3328-3332 IN denotes with
T8978 3333-3336 DT denotes the
T8979 3356-3362 NN denotes factor
T8980 3337-3341 NN denotes ARNT
T8981 3342-3355 NN denotes transcription
T8982 3363-3364 -LRB- denotes [
T8983 3364-3365 CD denotes 7
T8984 3365-3366 -RRB- denotes ]
T8985 3366-3367 . denotes .
T8986 3367-3540 sentence denotes It is also intriguing that the deuterostome specific SDP repeat interacts with GAS41, a component/accessory factor of the human SWI/SNF chromatin remodeling complex [3,15].
T8987 3368-3370 PRP denotes It
T8988 3371-3373 VBZ denotes is
T8989 3374-3378 RB denotes also
T8990 3379-3389 JJ denotes intriguing
T8991 3390-3394 IN denotes that
T8992 3432-3441 VBZ denotes interacts
T8993 3395-3398 DT denotes the
T8994 3425-3431 NN denotes repeat
T8995 3399-3411 NN denotes deuterostome
T8996 3412-3420 JJ denotes specific
T8997 3421-3424 NN denotes SDP
T8998 3442-3446 IN denotes with
T8999 3447-3452 NN denotes GAS41
T9000 3452-3454 , denotes ,
T9001 3454-3455 DT denotes a
T9002 3476-3482 NN denotes factor
T9003 3456-3465 NN denotes component
T9004 3466-3475 NN denotes accessory
T9005 3465-3466 HYPH denotes /
T9006 3483-3485 IN denotes of
T9007 3486-3489 DT denotes the
T9008 3525-3532 NN denotes complex
T9009 3490-3495 JJ denotes human
T9010 3496-3499 NN denotes SWI
T9011 3500-3503 NN denotes SNF
T9012 3499-3500 HYPH denotes /
T9013 3504-3513 NN denotes chromatin
T9014 3514-3524 NN denotes remodeling
T9015 3533-3534 -LRB- denotes [
T9016 3536-3538 CD denotes 15
T9017 3534-3535 CD denotes 3
T9018 3535-3536 , denotes ,
T9019 3538-3539 -RRB- denotes ]
T9020 3539-3540 . denotes .
T9021 3540-3714 sentence denotes Although there is a D. melanogaster homologue of GAS41, dmGAS41, the large scale proteomic interaction database does not indicate a direct interaction of dmGAS41 with DTACC.
T9022 3541-3549 IN denotes Although
T9023 3556-3558 VBZ denotes is
T9024 3550-3555 EX denotes there
T9025 3662-3670 VB denotes indicate
T9026 3559-3560 DT denotes a
T9027 3577-3586 NN denotes homologue
T9028 3561-3563 NNP denotes D.
T9029 3564-3576 NNP denotes melanogaster
T9030 3587-3589 IN denotes of
T9031 3590-3595 NN denotes GAS41
T9032 3595-3597 , denotes ,
T9033 3597-3604 NN denotes dmGAS41
T9034 3604-3606 , denotes ,
T9035 3606-3609 DT denotes the
T9036 3644-3652 NN denotes database
T9037 3610-3615 JJ denotes large
T9038 3616-3621 NN denotes scale
T9039 3632-3643 NN denotes interaction
T9040 3622-3631 JJ denotes proteomic
T9041 3653-3657 VBZ denotes does
T9042 3658-3661 RB denotes not
T9043 3671-3672 DT denotes a
T9044 3680-3691 NN denotes interaction
T9045 3673-3679 JJ denotes direct
T9046 3692-3694 IN denotes of
T9047 3695-3702 NN denotes dmGAS41
T9048 3703-3707 IN denotes with
T9049 3708-3713 NN denotes DTACC
T9050 3713-3714 . denotes .
T9051 3714-3799 sentence denotes This may be due to the lack of the SDP repeat region in the Drosophila TACC protein.
T9052 3715-3719 DT denotes This
T9053 3724-3726 VB denotes be
T9054 3720-3723 MD denotes may
T9055 3727-3730 IN denotes due
T9056 3731-3733 IN denotes to
T9057 3734-3737 DT denotes the
T9058 3738-3742 NN denotes lack
T9059 3743-3745 IN denotes of
T9060 3746-3749 DT denotes the
T9061 3761-3767 NN denotes region
T9062 3750-3753 NN denotes SDP
T9063 3754-3760 NN denotes repeat
T9064 3768-3770 IN denotes in
T9065 3771-3774 DT denotes the
T9066 3791-3798 NN denotes protein
T9067 3775-3785 NNP denotes Drosophila
T9068 3786-3790 NN denotes TACC
T9069 3798-3799 . denotes .
T9070 3799-3995 sentence denotes This further suggests that the vertebrate TACCs have gained the specific ability to direct interact with transcriptional regulatory complexes, and that bridging protein(s) are no longer required.
T9071 3800-3804 DT denotes This
T9072 3813-3821 VBZ denotes suggests
T9073 3805-3812 RB denotes further
T9074 3822-3826 IN denotes that
T9075 3853-3859 VBN denotes gained
T9076 3827-3830 DT denotes the
T9077 3842-3847 NNS denotes TACCs
T9078 3831-3841 NN denotes vertebrate
T9079 3848-3852 VBP denotes have
T9080 3860-3863 DT denotes the
T9081 3873-3880 NN denotes ability
T9082 3864-3872 JJ denotes specific
T9083 3881-3883 TO denotes to
T9084 3891-3899 VB denotes interact
T9085 3884-3890 JJ denotes direct
T9086 3900-3904 IN denotes with
T9087 3905-3920 JJ denotes transcriptional
T9088 3932-3941 NNS denotes complexes
T9089 3921-3931 JJ denotes regulatory
T9090 3941-3943 , denotes ,
T9091 3943-3946 CC denotes and
T9092 3947-3951 IN denotes that
T9093 3986-3994 VBN denotes required
T9094 3952-3960 VBG denotes bridging
T9095 3961-3968 NN denotes protein
T9096 3968-3969 -LRB- denotes (
T9097 3969-3970 AFX denotes s
T9098 3970-3971 -RRB- denotes )
T9099 3972-3975 VBP denotes are
T9100 3976-3978 RB denotes no
T9101 3979-3985 RBR denotes longer
T9102 3994-3995 . denotes .
T9103 3995-4252 sentence denotes Thus, where the ceTAC protein is only composed of the TACC domain, the significantly larger TACC family members in higher protostomes and deuterostomes may have integrated one or more functions of the bridging protein (in this case lin15A, lin36 or lin37).
T9104 3996-4000 RB denotes Thus
T9105 4157-4167 VBN denotes integrated
T9106 4000-4002 , denotes ,
T9107 4002-4007 WRB denotes where
T9108 4034-4042 VBN denotes composed
T9109 4008-4011 DT denotes the
T9110 4018-4025 NN denotes protein
T9111 4012-4017 NN denotes ceTAC
T9112 4026-4028 VBZ denotes is
T9113 4029-4033 RB denotes only
T9114 4043-4045 IN denotes of
T9115 4046-4049 DT denotes the
T9116 4055-4061 NN denotes domain
T9117 4050-4054 NN denotes TACC
T9118 4061-4063 , denotes ,
T9119 4063-4066 DT denotes the
T9120 4100-4107 NNS denotes members
T9121 4067-4080 RB denotes significantly
T9122 4081-4087 JJR denotes larger
T9123 4088-4092 NN denotes TACC
T9124 4093-4099 NN denotes family
T9125 4108-4110 IN denotes in
T9126 4111-4117 JJR denotes higher
T9127 4118-4129 NNS denotes protostomes
T9128 4130-4133 CC denotes and
T9129 4134-4147 NNS denotes deuterostomes
T9130 4148-4151 MD denotes may
T9131 4152-4156 VB denotes have
T9132 4168-4171 CD denotes one
T9133 4180-4189 NNS denotes functions
T9134 4172-4174 CC denotes or
T9135 4175-4179 JJR denotes more
T9136 4190-4192 IN denotes of
T9137 4193-4196 DT denotes the
T9138 4206-4213 NN denotes protein
T9139 4197-4205 VBG denotes bridging
T9140 4214-4215 -LRB- denotes (
T9141 4215-4217 IN denotes in
T9142 4218-4222 DT denotes this
T9143 4223-4227 NN denotes case
T9144 4228-4234 NN denotes lin15A
T9145 4234-4236 , denotes ,
T9146 4236-4241 NN denotes lin36
T9147 4242-4244 CC denotes or
T9148 4245-4250 NN denotes lin37
T9149 4250-4251 -RRB- denotes )
T9150 4251-4252 . denotes .
T9151 4252-4474 sentence denotes This may also explain the absence of lin15A, lin36 and lin37 homologues in higher organisms, as they were no longer under selective evolutionary pressure to remain within the complex, and thus lost in the evolving genome.
T9152 4253-4257 DT denotes This
T9153 4267-4274 VB denotes explain
T9154 4258-4261 MD denotes may
T9155 4262-4266 RB denotes also
T9156 4275-4278 DT denotes the
T9157 4279-4286 NN denotes absence
T9158 4287-4289 IN denotes of
T9159 4290-4296 NN denotes lin15A
T9160 4314-4324 NNS denotes homologues
T9161 4296-4298 , denotes ,
T9162 4298-4303 NN denotes lin36
T9163 4304-4307 CC denotes and
T9164 4308-4313 NN denotes lin37
T9165 4325-4327 IN denotes in
T9166 4328-4334 JJR denotes higher
T9167 4335-4344 NNS denotes organisms
T9168 4344-4346 , denotes ,
T9169 4346-4348 IN denotes as
T9170 4354-4358 VBD denotes were
T9171 4349-4353 PRP denotes they
T9172 4359-4361 RB denotes no
T9173 4362-4368 RBR denotes longer
T9174 4369-4374 IN denotes under
T9175 4375-4384 JJ denotes selective
T9176 4398-4406 NN denotes pressure
T9177 4385-4397 JJ denotes evolutionary
T9178 4407-4409 TO denotes to
T9179 4410-4416 VB denotes remain
T9180 4417-4423 IN denotes within
T9181 4424-4427 DT denotes the
T9182 4428-4435 NN denotes complex
T9183 4435-4437 , denotes ,
T9184 4437-4440 CC denotes and
T9185 4441-4445 RB denotes thus
T9186 4446-4450 VBN denotes lost
T9187 4451-4453 IN denotes in
T9188 4454-4457 DT denotes the
T9189 4467-4473 NN denotes genome
T9190 4458-4466 VBG denotes evolving
T9191 4473-4474 . denotes .
T13918 4677-4681 NN denotes Lane
T13919 4682-4683 CD denotes 3
T13920 4683-4685 SYM denotes :
T13921 4685-4686 CD denotes 5
T13922 4686-4687 NN denotes %
T13923 4694-4696 IN denotes of
T13924 4697-4699 FW denotes in
T13925 4700-4705 FW denotes vitro
T13926 4723-4730 NN denotes protein
T13927 4706-4716 VBN denotes translated
T13928 4717-4720 NN denotes RXR
T13929 4721-4722 NN denotes β
T13930 4720-4721 HYPH denotes -
T13931 4730-4731 . denotes .
T13932 4731-4849 sentence denotes Bottom two panels represent Coomassie blue stained gels of pull down experiment showing loading of GST-TACC2 and GST.
T13933 4732-4738 JJ denotes Bottom
T13934 4743-4749 NNS denotes panels
T13935 4739-4742 CD denotes two
T13936 4750-4759 VBP denotes represent
T13937 4760-4769 NNP denotes Coomassie
T13938 4783-4787 NNS denotes gels
T13939 4770-4774 JJ denotes blue
T13940 4775-4782 VBN denotes stained
T13941 4788-4790 IN denotes of
T13942 4791-4795 VB denotes pull
T13943 4801-4811 NN denotes experiment
T13944 4796-4800 RP denotes down
T13945 4812-4819 VBG denotes showing
T13946 4820-4827 NN denotes loading
T13947 4828-4830 IN denotes of
T13948 4831-4834 NN denotes GST
T13949 4835-4840 NN denotes TACC2
T13950 4834-4835 HYPH denotes -
T13951 4841-4844 CC denotes and
T13952 4845-4848 NN denotes GST
T13953 4848-4849 . denotes .
T13889 4553-4555 IN denotes of
T13890 4556-4558 CD denotes 12
T13891 4558-4559 NN denotes %
T13892 4560-4563 NN denotes SDS
T13893 4579-4582 NN denotes gel
T13894 4564-4578 NN denotes polyacrylamide
T13895 4583-4587 IN denotes with
T13896 4588-4590 FW denotes in
T13897 4591-4596 FW denotes vitro
T13898 4597-4607 VBN denotes translated
T13899 4614-4623 NN denotes construct
T13900 4608-4613 NN denotes RXRβ3
T13901 4624-4630 VBN denotes pulled
T13902 4631-4635 RP denotes down
T13903 4636-4640 IN denotes with
T13904 4641-4644 NN denotes GST
T13905 4645-4650 NN denotes TACC2
T13906 4644-4645 HYPH denotes -
T13907 4651-4652 -LRB- denotes (
T13908 4652-4656 NN denotes Lane
T13909 4657-4658 CD denotes 1
T13910 4658-4659 -RRB- denotes )
T13911 4660-4662 CC denotes or
T13912 4663-4666 NN denotes GST
T13913 4667-4668 -LRB- denotes (
T13914 4668-4672 NN denotes Lane
T13915 4673-4674 CD denotes 2
T13916 4674-4675 -RRB- denotes )
T13917 4675-4676 : denotes ;
T13875 4485-4487 FW denotes In
T13876 4488-4493 FW denotes vitro
T13877 4494-4505 NN denotes interaction
T13878 4506-4508 IN denotes of
T13879 4509-4514 NN denotes RXRβ3
T13880 4515-4518 CC denotes and
T13881 4519-4525 NNS denotes TACC2s
T13882 4525-4526 . denotes .
T13883 4526-4731 sentence denotes Top panel: Autoradiograph of 12% SDS polyacrylamide gel with in vitro translated RXRβ3 construct pulled down with GST-TACC2 (Lane 1) or GST (Lane 2); Lane 3: 5% input of in vitro translated RXR-β protein.
T13884 4527-4530 JJ denotes Top
T13885 4531-4536 NN denotes panel
T13886 4538-4552 NN denotes Autoradiograph
T13887 4536-4538 : denotes :
T13888 4688-4693 NN denotes input
R8999 T13879 T13878 pobj RXRβ3,of
R9000 T13880 T13879 cc and,RXRβ3
R9001 T13881 T13879 conj TACC2s,RXRβ3
R9002 T13882 T13877 punct .,interaction
R9003 T13884 T13885 amod Top,panel
R9004 T13885 T13886 dep panel,Autoradiograph
R9005 T13886 T13888 dep Autoradiograph,input
R9006 T13887 T13886 punct : ,Autoradiograph
R9007 T13889 T13886 prep of,Autoradiograph
R9008 T13890 T13891 nummod 12,%
R9009 T13891 T13892 compound %,SDS
R9010 T13892 T13893 compound SDS,gel
R9011 T13893 T13889 pobj gel,of
R9012 T13894 T13893 compound polyacrylamide,gel
R9013 T13895 T13886 prep with,Autoradiograph
R9014 T13896 T13897 advmod in,vitro
R9015 T13897 T13898 advmod vitro,translated
R9016 T13898 T13899 amod translated,construct
R9017 T13899 T13895 pobj construct,with
R9018 T13900 T13899 compound RXRβ3,construct
R9019 T13901 T13899 acl pulled,construct
R9020 T13902 T13901 prt down,pulled
R9021 T13903 T13901 prep with,pulled
R9022 T13904 T13905 compound GST,TACC2
R9023 T13905 T13903 pobj TACC2,with
R9024 T13906 T13905 punct -,TACC2
R9025 T13907 T13908 punct (,Lane
R9026 T13908 T13905 parataxis Lane,TACC2
R9027 T13909 T13908 nummod 1,Lane
R9028 T13910 T13908 punct ),Lane
R9029 T13911 T13905 cc or,TACC2
R9030 T13912 T13905 conj GST,TACC2
R9031 T13913 T13914 punct (,Lane
R9032 T13914 T13912 parataxis Lane,GST
R9033 T13915 T13914 nummod 2,Lane
R9034 T13916 T13914 punct ),Lane
R9035 T13917 T13888 punct ;,input
R9036 T13918 T13888 dep Lane,input
R9037 T13919 T13918 nummod 3,Lane
R9038 T13920 T13888 punct : ,input
R9039 T13921 T13888 nummod 5,input
R9040 T13922 T13888 compound %,input
R9041 T13923 T13888 prep of,input
R9042 T13924 T13925 advmod in,vitro
R9043 T13925 T13926 amod vitro,protein
R9044 T13926 T13923 pobj protein,of
R9045 T13927 T13926 amod translated,protein
R9046 T13928 T13929 compound RXR,β
R9047 T13929 T13926 compound β,protein
R9048 T13930 T13929 punct -,β
R9049 T13931 T13888 punct .,input
R9050 T13933 T13934 amod Bottom,panels
R9051 T13934 T13936 nsubj panels,represent
R9052 T13935 T13934 nummod two,panels
R9053 T13937 T13938 nmod Coomassie,gels
R9054 T13938 T13936 dobj gels,represent
R9055 T13939 T13940 amod blue,stained
R9056 T13940 T13938 amod stained,gels
R9057 T13941 T13938 prep of,gels
R9058 T13942 T13943 amod pull,experiment
R9059 T13943 T13941 pobj experiment,of
R9060 T13944 T13942 prt down,pull
R9061 T13945 T13943 acl showing,experiment
R9062 T13946 T13945 dobj loading,showing
R9063 T13947 T13946 prep of,loading
R9064 T13948 T13949 compound GST,TACC2
R9065 T13949 T13947 pobj TACC2,of
R9066 T13950 T13949 punct -,TACC2
R9067 T13951 T13949 cc and,TACC2
R9068 T13952 T13949 conj GST,TACC2
R9069 T13953 T13936 punct .,represent
R5177 T8333 T8332 prep of,Comparison
R5178 T8334 T8333 pobj modeled,of
R5179 T8335 T8332 prep with,Comparison
R5180 T8336 T8337 advmod experimentally,defined
R5181 T8337 T8335 pobj defined,with
R5182 T8338 T8332 appos interactions,Comparison
R5183 T8339 T8338 prep of,interactions
R5184 T8340 T8341 det the,proteins
R5185 T8341 T8339 pobj proteins,of
R5186 T8342 T8341 compound vertebrate,proteins
R5187 T8343 T8341 compound TACC,proteins
R5188 T8345 T8346 det The,data
R5189 T8346 T8348 nsubj data,is
R5190 T8347 T8346 compound interaction,data
R5191 T8348 T8353 ccomp is,beginning
R5192 T8349 T8346 prep for,data
R5193 T8350 T8351 det the,TACCs
R5194 T8351 T8349 pobj TACCs,for
R5195 T8352 T8351 compound vertebrate,TACCs
R5196 T8354 T8355 advmod relatively,limited
R5197 T8355 T8348 acomp limited,is
R5198 T8356 T8353 punct ;,beginning
R5199 T8357 T8353 advmod however,beginning
R5200 T8358 T8353 punct ", ",beginning
R5201 T8359 T8360 compound interaction,networks
R5202 T8360 T8353 nsubj networks,beginning
R5203 T8361 T8353 aux are,beginning
R5204 T8362 T8353 advmod now,beginning
R5205 T8363 T8364 aux to,emerge
R5206 T8364 T8353 xcomp emerge,beginning
R5207 T8365 T8353 punct .,beginning
R5208 T8367 T8368 det The,results
R5209 T8368 T8369 nsubj results,indicate
R5210 T8370 T8368 prep of,results
R5211 T8371 T8372 poss our,analysis
R5212 T8372 T8370 pobj analysis,of
R5213 T8373 T8372 amod functional,analysis
R5214 T8374 T8368 punct ", ",results
R5215 T8375 T8376 advmod as,as
R5216 T8376 T8368 cc as,results
R5217 T8377 T8376 advmod well,as
R5218 T8378 T8379 amod other,data
R5219 T8379 T8368 conj data,results
R5220 T8380 T8379 amod published,data
R5221 T8381 T8369 advmod clearly,indicate
R5222 T8382 T8383 mark that,interact
R5223 T8383 T8369 ccomp interact,indicate
R5224 T8384 T8385 det the,TACCs
R5225 T8385 T8383 nsubj TACCs,interact
R5226 T8386 T8385 compound vertebrate,TACCs
R5227 T8387 T8383 prep with,interact
R5228 T8388 T8387 pobj proteins,with
R5229 T8389 T8390 dep that,divided
R5230 T8390 T8388 relcl divided,proteins
R5231 T8391 T8390 aux can,divided
R5232 T8392 T8390 auxpass be,divided
R5233 T8393 T8390 prep into,divided
R5234 T8394 T8395 nummod two,categories
R5235 T8395 T8393 pobj categories,into
R5236 T8396 T8395 amod broad,categories
R5237 T8397 T8369 punct : ,indicate
R5238 T8398 T8399 meta 1,proteins
R5239 T8401 T8398 punct ),1
R5240 T8402 T8399 prep with,proteins
R5241 T8403 T8402 pobj roles,with
R5242 T8404 T8403 prep in,roles
R5243 T8405 T8406 npadvmod centrosome,mitotic
R5244 T8406 T8408 amod mitotic,spindle
R5245 T8407 T8406 punct /,mitotic
R5246 T8408 T8409 compound spindle,dynamics
R5247 T8409 T8404 pobj dynamics,in
R5248 T8410 T8399 punct ", ",proteins
R5249 T8411 T8399 cc and,proteins
R5250 T8412 T8413 meta 2,proteins
R5251 T8413 T8399 conj proteins,proteins
R5252 T8414 T8412 punct ),2
R5253 T8415 T8413 acl involved,proteins
R5254 T8416 T8415 prep in,involved
R5255 T8417 T8418 compound gene,regulation
R5256 T8418 T8416 pobj regulation,in
R5257 T8419 T8415 punct ", ",involved
R5258 T8420 T8421 preconj either,at
R5259 T8421 T8415 prep at,involved
R5260 T8422 T8423 det the,level
R5261 T8423 T8421 pobj level,at
R5262 T8424 T8423 prep of,level
R5263 T8425 T8424 pobj transcription,of
R5264 T8426 T8425 punct ", ",transcription
R5265 T8427 T8425 cc or,transcription
R5266 T8428 T8429 amod subsequent,processing
R5267 T8429 T8425 conj processing,transcription
R5268 T8430 T8429 compound RNA,processing
R5269 T8431 T8429 cc and,processing
R5270 T8432 T8429 conj translation,processing
R5271 T8433 T8434 punct [,3
R5272 T8434 T8415 parataxis 3,involved
R5273 T8435 T8434 punct ",",3
R5274 T8436 T8434 appos 5,3
R5275 T8437 T8438 punct -,7
R5276 T8438 T8436 prep 7,5
R5277 T8439 T8434 punct ",",3
R5278 T8440 T8434 appos 15,3
R5279 T8441 T8434 punct ",",3
R5280 T8442 T8434 appos 19,3
R5281 T8443 T8444 punct -,21
R5282 T8444 T8442 prep 21,19
R5283 T8445 T8434 punct ",",3
R5284 T8446 T8434 appos 24,3
R5285 T8447 T8434 punct ",",3
R5286 T8448 T8434 appos 25,3
R5287 T8449 T8434 punct ",",3
R5288 T8450 T8434 appos 33,3
R5289 T8451 T8434 punct ",",3
R5290 T8452 T8434 appos 34,3
R5291 T8453 T8434 punct ],3
R5292 T8454 T8413 punct .,proteins
R5293 T8456 T8457 nsubj Many,appear
R5294 T8458 T8456 prep of,Many
R5295 T8459 T8460 det these,proteins
R5296 T8460 T8458 pobj proteins,of
R5297 T8461 T8457 aux do,appear
R5298 T8462 T8457 neg not,appear
R5299 T8463 T8464 aux to,interact
R5300 T8464 T8457 xcomp interact,appear
R5301 T8465 T8464 advmod directly,interact
R5302 T8466 T8464 prep with,interact
R5303 T8467 T8468 det the,TACCs
R5304 T8468 T8466 pobj TACCs,with
R5305 T8469 T8468 compound protostome,TACCs
R5306 T8470 T8457 punct ", ",appear
R5307 T8471 T8457 cc but,appear
R5308 T8472 T8473 aux would,expected
R5309 T8473 T8457 conj expected,appear
R5310 T8474 T8473 auxpass be,expected
R5311 T8475 T8476 aux to,be
R5312 T8476 T8473 xcomp be,expected
R5313 T8477 T8476 prep in,be
R5314 T8478 T8479 det the,complex
R5315 T8479 T8477 pobj complex,in
R5316 T8480 T8479 amod same,complex
R5317 T8481 T8479 compound protein,complex
R5318 T8482 T8483 punct (,6D
R5319 T8483 T8473 parataxis 6D,expected
R5320 T8484 T8483 nmod Fig.,6D
R5321 T8485 T8483 nummod 6C,6D
R5322 T8486 T8483 punct ",",6D
R5323 T8487 T8483 punct ),6D
R5324 T8488 T8457 punct .,appear
R5325 T8490 T8491 amod Significant,analysis
R5326 T8491 T8492 nsubjpass analysis,published
R5327 T8493 T8491 prep of,analysis
R5328 T8494 T8495 det the,association
R5329 T8495 T8493 pobj association,of
R5330 T8496 T8495 prep of,association
R5331 T8497 T8498 det the,TACCs
R5332 T8498 T8496 pobj TACCs,of
R5333 T8499 T8495 prep with,association
R5334 T8500 T8501 det the,centrosome
R5335 T8501 T8499 pobj centrosome,with
R5336 T8502 T8495 cc and,association
R5337 T8503 T8504 det the,dynamics
R5338 T8504 T8495 conj dynamics,association
R5339 T8505 T8504 prep of,dynamics
R5340 T8506 T8507 amod mitotic,spindle
R5341 T8507 T8508 compound spindle,assembly
R5342 T8508 T8505 pobj assembly,of
R5343 T8509 T8491 prep from,analysis
R5344 T8510 T8509 pobj yeast,from
R5345 T8511 T8509 prep to,from
R5346 T8512 T8511 pobj humans,to
R5347 T8513 T8492 aux has,published
R5348 T8514 T8492 auxpass been,published
R5349 T8515 T8516 punct [,5
R5350 T8516 T8492 parataxis 5,published
R5351 T8517 T8516 punct ",",5
R5352 T8518 T8516 appos 6,5
R5353 T8519 T8516 punct ",",5
R5354 T8520 T8516 appos 21,5
R5355 T8521 T8522 punct -,24
R5356 T8522 T8520 prep 24,21
R5357 T8523 T8516 punct ],5
R5358 T8524 T8492 punct .,published
R5359 T8526 T8527 prep From,seems
R5360 T8528 T8529 det this,analysis
R5361 T8529 T8526 pobj analysis,From
R5362 T8530 T8527 punct ", ",seems
R5363 T8531 T8527 nsubj it,seems
R5364 T8532 T8527 oprd likely,seems
R5365 T8533 T8534 mark that,retained
R5366 T8534 T8527 ccomp retained,seems
R5367 T8535 T8536 det the,protein
R5368 T8536 T8534 nsubj protein,retained
R5369 T8537 T8536 compound vertebrate,protein
R5370 T8538 T8536 compound TACC3,protein
R5371 T8539 T8534 aux has,retained
R5372 T8540 T8541 det this,function
R5373 T8541 T8534 dobj function,retained
R5374 T8542 T8541 amod direct,function
R5375 T8543 T8541 amod ancestral,function
R5376 T8544 T8527 punct ", ",seems
R5377 T8545 T8527 prep based,seems
R5378 T8546 T8545 prep upon,based
R5379 T8547 T8548 poss its,location
R5380 T8548 T8546 pobj location,upon
R5381 T8549 T8548 prep in,location
R5382 T8550 T8551 det these,structures
R5383 T8551 T8549 pobj structures,in
R5384 T8552 T8548 prep during,location
R5385 T8553 T8552 pobj mitosis,during
R5386 T8554 T8555 punct [,27
R5387 T8555 T8548 parataxis 27,location
R5388 T8556 T8555 punct ],27
R5389 T8557 T8548 punct ", ",location
R5390 T8558 T8559 poss its,interaction
R5391 T8559 T8548 conj interaction,location
R5392 T8560 T8559 amod strong,interaction
R5393 T8561 T8559 prep with,interaction
R5394 T8562 T8563 compound Aurora,A
R5395 T8563 T8561 pobj A,with
R5396 T8564 T8563 compound Kinase,A
R5397 T8565 T8559 punct ", ",interaction
R5398 T8566 T8559 cc and,interaction
R5399 T8567 T8568 det the,observation
R5400 T8568 T8559 conj observation,interaction
R5401 T8569 T8570 mark that,is
R5402 T8570 T8568 acl is,observation
R5403 T8571 T8570 nsubj it,is
R5404 T8572 T8573 det the,protein
R5405 T8573 T8570 attr protein,is
R5406 T8574 T8573 advmod only,protein
R5407 T8575 T8573 amod human,protein
R5408 T8576 T8573 compound TACC,protein
R5409 T8577 T8573 acl phosphorylated,protein
R5410 T8578 T8577 agent by,phosphorylated
R5411 T8579 T8580 det this,enzyme
R5412 T8580 T8578 pobj enzyme,by
R5413 T8581 T8582 punct [,21
R5414 T8582 T8568 parataxis 21,observation
R5415 T8583 T8582 punct ],21
R5416 T8584 T8527 punct .,seems
R5417 T8586 T8587 advmod However,suggests
R5418 T8588 T8587 punct ", ",suggests
R5419 T8589 T8590 det the,variability
R5420 T8590 T8587 nsubj variability,suggests
R5421 T8591 T8590 prep of,variability
R5422 T8592 T8593 det the,domain
R5423 T8593 T8591 pobj domain,of
R5424 T8594 T8593 amod central,domain
R5425 T8595 T8593 prep of,domain
R5426 T8596 T8597 det the,orthologues
R5427 T8597 T8595 pobj orthologues,of
R5428 T8598 T8597 compound vertebrate,orthologues
R5429 T8599 T8587 punct ", ",suggests
R5430 T8600 T8601 mark that,acquired
R5431 T8601 T8587 ccomp acquired,suggests
R5432 T8602 T8601 nsubj TACC3,acquired
R5433 T8603 T8601 aux may,acquired
R5434 T8604 T8601 advmod also,acquired
R5435 T8605 T8601 aux have,acquired
R5436 T8606 T8607 amod additional,functions
R5437 T8607 T8601 dobj functions,acquired
R5438 T8608 T8606 punct ", ",additional
R5439 T8609 T8606 cc and,additional
R5440 T8610 T8611 prep in,specific
R5441 T8611 T8606 conj specific,additional
R5442 T8612 T8613 det some,instances
R5443 T8613 T8610 pobj instances,in
R5444 T8614 T8611 punct ", ",specific
R5445 T8615 T8611 npadvmod species,specific
R5446 T8616 T8611 punct -,specific
R5447 T8617 T8587 punct .,suggests
R5448 T8619 T8620 prep For,acquired
R5449 T8621 T8619 pobj instance,For
R5450 T8622 T8620 punct ", ",acquired
R5451 T8623 T8620 prep in,acquired
R5452 T8624 T8625 compound X.,laevis
R5453 T8625 T8623 pobj laevis,in
R5454 T8626 T8620 punct ", ",acquired
R5455 T8627 T8628 det the,protein
R5456 T8628 T8620 nsubj protein,acquired
R5457 T8629 T8628 compound maskin,protein
R5458 T8630 T8620 aux has,acquired
R5459 T8631 T8632 det a,site
R5460 T8632 T8620 dobj site,acquired
R5461 T8633 T8632 compound binding,site
R5462 T8634 T8632 prep for,site
R5463 T8635 T8636 det the,protein
R5464 T8636 T8634 pobj protein,for
R5465 T8637 T8636 compound eIF4E,protein
R5466 T8638 T8632 punct ", ",site
R5467 T8639 T8632 cc and,site
R5468 T8640 T8641 advmod thus,function
R5469 T8641 T8632 conj function,site
R5470 T8642 T8641 det a,function
R5471 T8643 T8641 prep in,function
R5472 T8644 T8645 det the,control
R5473 T8645 T8643 pobj control,in
R5474 T8646 T8645 amod coordinated,control
R5475 T8647 T8645 prep of,control
R5476 T8648 T8647 pobj polyadenylation,of
R5477 T8649 T8648 cc and,polyadenylation
R5478 T8650 T8648 conj translation,polyadenylation
R5479 T8651 T8641 prep in,function
R5480 T8652 T8653 det the,oocyte
R5481 T8653 T8651 pobj oocyte,in
R5482 T8654 T8653 compound Xenopus,oocyte
R5483 T8655 T8656 punct [,35
R5484 T8656 T8620 parataxis 35,acquired
R5485 T8657 T8656 nummod 8,35
R5486 T8658 T8656 punct ",",35
R5487 T8659 T8656 punct ],35
R5488 T8660 T8620 punct .,acquired
R5489 T8662 T8663 det A,study
R5490 T8663 T8665 nsubj study,suggested
R5491 T8664 T8663 amod recent,study
R5492 T8665 T8667 ccomp suggested,is
R5493 T8666 T8665 aux has,suggested
R5494 T8668 T8669 mark that,be
R5495 T8669 T8665 ccomp be,suggested
R5496 T8670 T8671 det this,function
R5497 T8671 T8669 nsubj function,be
R5498 T8672 T8669 aux may,be
R5499 T8673 T8669 acomp unique,be
R5500 T8674 T8673 prep to,unique
R5501 T8675 T8674 pobj maskin,to
R5502 T8676 T8667 punct : ,is
R5503 T8677 T8678 mark although,is
R5504 T8678 T8667 advcl is,is
R5505 T8679 T8678 nsubj it,is
R5506 T8680 T8678 acomp unclear,is
R5507 T8681 T8682 mark whether,interact
R5508 T8682 T8678 ccomp interact,is
R5509 T8683 T8684 det the,proteins
R5510 T8684 T8682 nsubj proteins,interact
R5511 T8685 T8684 amod other,proteins
R5512 T8686 T8684 compound vertebrate,proteins
R5513 T8687 T8684 compound TACC3,proteins
R5514 T8688 T8682 prep with,interact
R5515 T8689 T8690 det the,complex
R5516 T8690 T8688 pobj complex,with
R5517 T8691 T8692 compound eIF4E,CPEB
R5518 T8692 T8690 compound CPEB,complex
R5519 T8693 T8692 punct /,CPEB
R5520 T8694 T8667 punct ", ",is
R5521 T8695 T8696 det the,isoform
R5522 T8696 T8667 nsubj isoform,is
R5523 T8697 T8696 amod human,isoform
R5524 T8698 T8696 compound TACC1A,isoform
R5525 T8699 T8667 acomp unable,is
R5526 T8700 T8701 aux to,interact
R5527 T8701 T8699 xcomp interact,unable
R5528 T8702 T8701 prep with,interact
R5529 T8703 T8704 det the,complex
R5530 T8704 T8702 pobj complex,with
R5531 T8705 T8706 compound eIF4E,CPEB
R5532 T8706 T8704 compound CPEB,complex
R5533 T8707 T8706 punct /,CPEB
R5534 T8708 T8667 punct .,is
R5535 T8710 T8711 advmod Instead,evolved
R5536 T8712 T8711 punct ", ",evolved
R5537 T8713 T8714 det some,isoforms
R5538 T8714 T8711 nsubj isoforms,evolved
R5539 T8715 T8714 compound TACC1,isoforms
R5540 T8716 T8711 aux have,evolved
R5541 T8717 T8718 det a,function
R5542 T8718 T8711 dobj function,evolved
R5543 T8719 T8718 amod related,function
R5544 T8720 T8719 punct ", ",related
R5545 T8721 T8719 cc but,related
R5546 T8722 T8719 conj distinct,related
R5547 T8723 T8711 prep by,evolved
R5548 T8724 T8725 advmod directly,interacting
R5549 T8725 T8723 pcomp interacting,by
R5550 T8726 T8725 prep with,interacting
R5551 T8727 T8726 pobj elements,with
R5552 T8728 T8727 prep of,elements
R5553 T8729 T8730 det the,machinery
R5554 T8730 T8728 pobj machinery,of
R5555 T8731 T8732 nmod RNA,splicing
R5556 T8732 T8730 nmod splicing,machinery
R5557 T8733 T8732 cc and,splicing
R5558 T8734 T8732 conj transport,splicing
R5559 T8735 T8736 punct [,19
R5560 T8736 T8711 parataxis 19,evolved
R5561 T8737 T8736 punct ],19
R5562 T8738 T8711 punct .,evolved
R5563 T8740 T8741 aux To,characterize
R5564 T8741 T8743 advcl characterize,used
R5565 T8742 T8741 advmod further,characterize
R5566 T8744 T8745 det the,functions
R5567 T8745 T8741 dobj functions,characterize
R5568 T8746 T8745 amod evolving,functions
R5569 T8747 T8745 prep of,functions
R5570 T8748 T8749 det the,proteins
R5571 T8749 T8747 pobj proteins,of
R5572 T8750 T8749 compound TACC,proteins
R5573 T8751 T8743 punct ", ",used
R5574 T8752 T8743 nsubj we,used
R5575 T8753 T8743 aux have,used
R5576 T8754 T8755 det an,method
R5577 T8755 T8743 dobj method,used
R5578 T8756 T8755 amod unbiased,method
R5579 T8757 T8755 nmod yeast,method
R5580 T8758 T8759 nummod two,hybrid
R5581 T8759 T8755 compound hybrid,method
R5582 T8760 T8755 compound screening,method
R5583 T8761 T8762 aux to,identify
R5584 T8762 T8743 advcl identify,used
R5585 T8763 T8762 dobj proteins,identify
R5586 T8764 T8765 dep that,bind
R5587 T8765 T8763 relcl bind,proteins
R5588 T8766 T8765 prep to,bind
R5589 T8767 T8768 det the,proteins
R5590 T8768 T8766 pobj proteins,to
R5591 T8769 T8768 amod human,proteins
R5592 T8770 T8768 compound TACC,proteins
R5593 T8771 T8772 punct [,34
R5594 T8772 T8743 parataxis 34,used
R5595 T8773 T8772 nummod 3,34
R5596 T8774 T8772 punct ",",34
R5597 T8775 T8772 punct ],34
R5598 T8776 T8743 punct .,used
R5599 T8778 T8779 prep In,identified
R5600 T8780 T8781 det a,screen
R5601 T8781 T8778 pobj screen,In
R5602 T8782 T8781 prep of,screen
R5603 T8783 T8784 det a,library
R5604 T8784 T8782 pobj library,of
R5605 T8785 T8784 nmod MATCHMAKER,library
R5606 T8786 T8787 amod fetal,brain
R5607 T8787 T8784 compound brain,library
R5608 T8788 T8789 punct (,Clontech
R5609 T8789 T8784 parataxis Clontech,library
R5610 T8790 T8789 compound BD,Clontech
R5611 T8791 T8789 compound Biosciences,Clontech
R5612 T8792 T8789 punct ),Clontech
R5613 T8793 T8779 punct ", ",identified
R5614 T8794 T8779 prep in,identified
R5615 T8795 T8794 pobj addition,in
R5616 T8796 T8795 prep to,addition
R5617 T8797 T8796 pcomp isolating,to
R5618 T8798 T8799 det the,acetyltransferase
R5619 T8799 T8797 dobj acetyltransferase,isolating
R5620 T8800 T8799 compound histone,acetyltransferase
R5621 T8801 T8799 appos hGCN5L2,acetyltransferase
R5622 T8802 T8803 punct [,34
R5623 T8803 T8797 parataxis 34,isolating
R5624 T8804 T8803 punct ],34
R5625 T8805 T8779 punct ", ",identified
R5626 T8806 T8779 nsubj we,identified
R5627 T8807 T8779 advmod also,identified
R5628 T8808 T8809 det the,isoform
R5629 T8809 T8779 dobj isoform,identified
R5630 T8810 T8809 compound β3,isoform
R5631 T8811 T8809 prep of,isoform
R5632 T8812 T8813 compound retinoid,X
R5633 T8813 T8815 compound X,β
R5634 T8814 T8813 punct -,X
R5635 T8815 T8811 pobj β,of
R5636 T8816 T8815 compound receptor,β
R5637 T8817 T8779 prep as,identified
R5638 T8818 T8819 det a,protein
R5639 T8819 T8817 pobj protein,as
R5640 T8820 T8821 dep that,interacts
R5641 T8821 T8819 relcl interacts,protein
R5642 T8822 T8821 prep with,interacts
R5643 T8823 T8824 det the,domain
R5644 T8824 T8822 pobj domain,with
R5645 T8825 T8824 compound TACC,domain
R5646 T8826 T8824 prep of,domain
R5647 T8827 T8826 pobj TACC2,of
R5648 T8828 T8779 punct .,identified
R5649 T8830 T8831 mark As,shown
R5650 T8831 T8832 advcl shown,confirmed
R5651 T8833 T8831 prep in,shown
R5652 T8834 T8833 pobj Fig.,in
R5653 T8835 T8834 nummod 7,Fig.
R5654 T8836 T8832 punct ", ",confirmed
R5655 T8837 T8838 det this,interaction
R5656 T8838 T8832 nsubjpass interaction,confirmed
R5657 T8839 T8832 auxpass is,confirmed
R5658 T8840 T8841 advmod in,vitro
R5659 T8841 T8832 advmod vitro,confirmed
R5660 T8842 T8832 prep by,confirmed
R5661 T8843 T8844 npadvmod GST,pull
R5662 T8844 T8846 amod pull,analysis
R5663 T8845 T8844 punct -,pull
R5664 T8846 T8842 pobj analysis,by
R5665 T8847 T8844 prt down,pull
R5666 T8848 T8832 punct .,confirmed
R5667 T8850 T8851 advmod Significantly,is
R5668 T8852 T8851 punct ", ",is
R5669 T8853 T8851 nsubj RXRβ,is
R5670 T8854 T8855 det a,family
R5671 T8855 T8851 attr family,is
R5672 T8856 T8855 amod close,family
R5673 T8857 T8855 amod relative,family
R5674 T8858 T8855 prep of,family
R5675 T8859 T8860 det the,receptor
R5676 T8860 T8858 pobj receptor,of
R5677 T8861 T8860 amod nuclear,receptor
R5678 T8862 T8860 compound hormone,receptor
R5679 T8863 T8860 punct ", ",receptor
R5680 T8864 T8860 appos nhr,receptor
R5681 T8865 T8864 punct -,nhr
R5682 T8866 T8864 nummod 86,nhr
R5683 T8867 T8860 punct ", ",receptor
R5684 T8868 T8860 prep from,receptor
R5685 T8869 T8870 compound C.,elegans
R5686 T8870 T8868 pobj elegans,from
R5687 T8871 T8870 punct ", ",elegans
R5688 T8872 T8873 dep which,interacts
R5689 T8873 T8870 relcl interacts,elegans
R5690 T8874 T8873 prep with,interacts
R5691 T8875 T8876 det the,protein
R5692 T8876 T8874 pobj protein,with
R5693 T8877 T8876 compound ceTAC,protein
R5694 T8878 T8876 compound binding,protein
R5695 T8879 T8876 appos lin36,protein
R5696 T8880 T8881 punct (,Fig.
R5697 T8881 T8873 parataxis Fig.,interacts
R5698 T8882 T8881 nummod 6A,Fig.
R5699 T8883 T8881 punct ),Fig.
R5700 T8884 T8851 punct .,is
R5701 T8886 T8887 nsubj This,suggests
R5702 T8888 T8889 mark that,evolved
R5703 T8889 T8887 ccomp evolved,suggests
R5704 T8890 T8891 mark while,require
R5705 T8891 T8889 advcl require,evolved
R5706 T8892 T8893 compound protostome,TACCs
R5707 T8893 T8891 nsubj TACCs,require
R5708 T8894 T8891 aux may,require
R5709 T8895 T8896 amod additional,factors
R5710 T8896 T8891 dobj factors,require
R5711 T8897 T8896 compound protein,factors
R5712 T8898 T8899 aux to,interact
R5713 T8899 T8891 advcl interact,require
R5714 T8900 T8899 prep with,interact
R5715 T8901 T8902 amod such,components
R5716 T8902 T8900 pobj components,with
R5717 T8903 T8889 punct ", ",evolved
R5718 T8904 T8905 det the,TACCs
R5719 T8905 T8889 nsubj TACCs,evolved
R5720 T8906 T8905 prep in,TACCs
R5721 T8907 T8908 amod higher,organisms
R5722 T8908 T8906 pobj organisms,in
R5723 T8909 T8889 aux may,evolved
R5724 T8910 T8889 aux have,evolved
R5725 T8911 T8912 det the,ability
R5726 T8912 T8889 dobj ability,evolved
R5727 T8913 T8914 aux to,interact
R5728 T8914 T8912 acl interact,ability
R5729 T8915 T8914 advmod directly,interact
R5730 T8916 T8914 prep with,interact
R5731 T8917 T8916 pobj some,with
R5732 T8918 T8917 prep of,some
R5733 T8919 T8920 det the,proteins
R5734 T8920 T8918 pobj proteins,of
R5735 T8921 T8914 prep in,interact
R5736 T8922 T8923 det the,map
R5737 T8923 T8921 pobj map,in
R5738 T8924 T8923 amod predicted,map
R5739 T8925 T8923 compound interaction,map
R5740 T8926 T8927 punct (,Fig.
R5741 T8927 T8887 parataxis Fig.,suggests
R5742 T8928 T8927 nummod 6E,Fig.
R5743 T8929 T8927 punct ),Fig.
R5744 T8930 T8887 punct .,suggests
R5745 T8932 T8933 advmod Indeed,appears
R5746 T8934 T8933 punct ", ",appears
R5747 T8935 T8933 nsubj this,appears
R5748 T8936 T8937 aux to,linked
R5749 T8937 T8933 xcomp linked,appears
R5750 T8938 T8937 auxpass be,linked
R5751 T8939 T8937 advmod directly,linked
R5752 T8940 T8937 prep to,linked
R5753 T8941 T8942 det the,acquisition
R5754 T8942 T8940 pobj acquisition,to
R5755 T8943 T8942 prep of,acquisition
R5756 T8944 T8945 amod new,domains
R5757 T8945 T8943 pobj domains,of
R5758 T8946 T8942 cc and,acquisition
R5759 T8947 T8942 conj duplication,acquisition
R5760 T8948 T8947 prep of,duplication
R5761 T8949 T8950 det the,precursor
R5762 T8950 T8948 pobj precursor,of
R5763 T8951 T8950 compound chordate,precursor
R5764 T8952 T8950 compound TACC,precursor
R5765 T8953 T8933 punct .,appears
R5766 T8955 T8956 prep In,was
R5767 T8957 T8955 pobj fact,In
R5768 T8958 T8956 punct ", ",was
R5769 T8959 T8960 det the,function
R5770 T8960 T8956 nsubj function,was
R5771 T8961 T8960 amod first,function
R5772 T8962 T8960 amod identified,function
R5773 T8963 T8960 prep of,function
R5774 T8964 T8965 det a,protein
R5775 T8965 T8963 pobj protein,of
R5776 T8966 T8965 compound vertebrate,protein
R5777 T8967 T8965 compound TACC,protein
R5778 T8968 T8956 prep as,was
R5779 T8969 T8970 det a,coactivator
R5780 T8970 T8968 pobj coactivator,as
R5781 T8971 T8970 amod transcriptional,coactivator
R5782 T8972 T8970 acl acting,coactivator
R5783 T8973 T8972 prep through,acting
R5784 T8974 T8975 det a,interaction
R5785 T8975 T8973 pobj interaction,through
R5786 T8976 T8975 amod direct,interaction
R5787 T8977 T8975 prep with,interaction
R5788 T8978 T8979 det the,factor
R5789 T8979 T8977 pobj factor,with
R5790 T8980 T8979 compound ARNT,factor
R5791 T8981 T8979 compound transcription,factor
R5792 T8982 T8983 punct [,7
R5793 T8983 T8956 parataxis 7,was
R5794 T8984 T8983 punct ],7
R5795 T8985 T8956 punct .,was
R5796 T8987 T8988 nsubj It,is
R5797 T8989 T8988 advmod also,is
R5798 T8990 T8988 acomp intriguing,is
R5799 T8991 T8992 mark that,interacts
R5800 T8992 T8988 ccomp interacts,is
R5801 T8993 T8994 det the,repeat
R5802 T8994 T8992 nsubj repeat,interacts
R5803 T8995 T8996 npadvmod deuterostome,specific
R5804 T8996 T8994 amod specific,repeat
R5805 T8997 T8994 compound SDP,repeat
R5806 T8998 T8992 prep with,interacts
R5807 T8999 T8998 pobj GAS41,with
R5808 T9000 T8999 punct ", ",GAS41
R5809 T9001 T9002 det a,factor
R5810 T9002 T8999 appos factor,GAS41
R5811 T9003 T9004 compound component,accessory
R5812 T9004 T9002 compound accessory,factor
R5813 T9005 T9004 punct /,accessory
R5814 T9006 T9002 prep of,factor
R5815 T9007 T9008 det the,complex
R5816 T9008 T9006 pobj complex,of
R5817 T9009 T9008 amod human,complex
R5818 T9010 T9011 compound SWI,SNF
R5819 T9011 T9008 compound SNF,complex
R5820 T9012 T9011 punct /,SNF
R5821 T9013 T9014 compound chromatin,remodeling
R5822 T9014 T9008 compound remodeling,complex
R5823 T9015 T9016 punct [,15
R5824 T9016 T8988 parataxis 15,is
R5825 T9017 T9016 nummod 3,15
R5826 T9018 T9016 punct ",",15
R5827 T9019 T9016 punct ],15
R5828 T9020 T8988 punct .,is
R5829 T9022 T9023 mark Although,is
R5830 T9023 T9025 advcl is,indicate
R5831 T9024 T9023 expl there,is
R5832 T9026 T9027 det a,homologue
R5833 T9027 T9023 attr homologue,is
R5834 T9028 T9029 compound D.,melanogaster
R5835 T9029 T9027 compound melanogaster,homologue
R5836 T9030 T9027 prep of,homologue
R5837 T9031 T9030 pobj GAS41,of
R5838 T9032 T9027 punct ", ",homologue
R5839 T9033 T9027 appos dmGAS41,homologue
R5840 T9034 T9025 punct ", ",indicate
R5841 T9035 T9036 det the,database
R5842 T9036 T9025 nsubj database,indicate
R5843 T9037 T9038 amod large,scale
R5844 T9038 T9039 nmod scale,interaction
R5845 T9039 T9036 compound interaction,database
R5846 T9040 T9039 amod proteomic,interaction
R5847 T9041 T9025 aux does,indicate
R5848 T9042 T9025 neg not,indicate
R5849 T9043 T9044 det a,interaction
R5850 T9044 T9025 dobj interaction,indicate
R5851 T9045 T9044 amod direct,interaction
R5852 T9046 T9044 prep of,interaction
R5853 T9047 T9046 pobj dmGAS41,of
R5854 T9048 T9044 prep with,interaction
R5855 T9049 T9048 pobj DTACC,with
R5856 T9050 T9025 punct .,indicate
R5857 T9052 T9053 nsubj This,be
R5858 T9054 T9053 aux may,be
R5859 T9055 T9053 prep due,be
R5860 T9056 T9055 pcomp to,due
R5861 T9057 T9058 det the,lack
R5862 T9058 T9055 pobj lack,due
R5863 T9059 T9058 prep of,lack
R5864 T9060 T9061 det the,region
R5865 T9061 T9059 pobj region,of
R5866 T9062 T9063 compound SDP,repeat
R5867 T9063 T9061 compound repeat,region
R5868 T9064 T9058 prep in,lack
R5869 T9065 T9066 det the,protein
R5870 T9066 T9064 pobj protein,in
R5871 T9067 T9066 compound Drosophila,protein
R5872 T9068 T9066 compound TACC,protein
R5873 T9069 T9053 punct .,be
R5874 T9071 T9072 nsubj This,suggests
R5875 T9073 T9072 advmod further,suggests
R5876 T9074 T9075 mark that,gained
R5877 T9075 T9072 advcl gained,suggests
R5878 T9076 T9077 det the,TACCs
R5879 T9077 T9075 nsubj TACCs,gained
R5880 T9078 T9077 compound vertebrate,TACCs
R5881 T9079 T9075 aux have,gained
R5882 T9080 T9081 det the,ability
R5883 T9081 T9075 dobj ability,gained
R5884 T9082 T9081 amod specific,ability
R5885 T9083 T9084 aux to,interact
R5886 T9084 T9081 acl interact,ability
R5887 T9085 T9084 amod direct,interact
R5888 T9086 T9084 prep with,interact
R5889 T9087 T9088 amod transcriptional,complexes
R5890 T9088 T9086 pobj complexes,with
R5891 T9089 T9088 amod regulatory,complexes
R5892 T9090 T9075 punct ", ",gained
R5893 T9091 T9075 cc and,gained
R5894 T9092 T9093 mark that,required
R5895 T9093 T9075 conj required,gained
R5896 T9094 T9095 amod bridging,protein
R5897 T9095 T9093 nsubjpass protein,required
R5898 T9096 T9095 punct (,protein
R5899 T9097 T9095 nmod s,protein
R5900 T9098 T9095 punct ),protein
R5901 T9099 T9093 auxpass are,required
R5902 T9100 T9101 neg no,longer
R5903 T9101 T9093 advmod longer,required
R5904 T9102 T9072 punct .,suggests
R5905 T9104 T9105 advmod Thus,integrated
R5906 T9106 T9105 punct ", ",integrated
R5907 T9107 T9108 advmod where,composed
R5908 T9108 T9105 advcl composed,integrated
R5909 T9109 T9110 det the,protein
R5910 T9110 T9108 nsubjpass protein,composed
R5911 T9111 T9110 compound ceTAC,protein
R5912 T9112 T9108 auxpass is,composed
R5913 T9113 T9108 advmod only,composed
R5914 T9114 T9108 prep of,composed
R5915 T9115 T9116 det the,domain
R5916 T9116 T9114 pobj domain,of
R5917 T9117 T9116 compound TACC,domain
R5918 T9118 T9105 punct ", ",integrated
R5919 T9119 T9120 det the,members
R5920 T9120 T9105 nsubj members,integrated
R5921 T9121 T9122 advmod significantly,larger
R5922 T9122 T9120 amod larger,members
R5923 T9123 T9120 compound TACC,members
R5924 T9124 T9120 compound family,members
R5925 T9125 T9120 prep in,members
R5926 T9126 T9127 amod higher,protostomes
R5927 T9127 T9125 pobj protostomes,in
R5928 T9128 T9127 cc and,protostomes
R5929 T9129 T9127 conj deuterostomes,protostomes
R5930 T9130 T9105 aux may,integrated
R5931 T9131 T9105 aux have,integrated
R5932 T9132 T9133 nummod one,functions
R5933 T9133 T9105 dobj functions,integrated
R5934 T9134 T9132 cc or,one
R5935 T9135 T9132 conj more,one
R5936 T9136 T9133 prep of,functions
R5937 T9137 T9138 det the,protein
R5938 T9138 T9136 pobj protein,of
R5939 T9139 T9138 amod bridging,protein
R5940 T9140 T9138 punct (,protein
R5941 T9141 T9138 prep in,protein
R5942 T9142 T9143 det this,case
R5943 T9143 T9141 pobj case,in
R5944 T9144 T9138 appos lin15A,protein
R5945 T9145 T9144 punct ", ",lin15A
R5946 T9146 T9144 conj lin36,lin15A
R5947 T9147 T9146 cc or,lin36
R5948 T9148 T9146 conj lin37,lin36
R5949 T9149 T9105 punct ),integrated
R5950 T9150 T9105 punct .,integrated
R5951 T9152 T9153 nsubj This,explain
R5952 T9154 T9153 aux may,explain
R5953 T9155 T9153 advmod also,explain
R5954 T9156 T9157 det the,absence
R5955 T9157 T9153 dobj absence,explain
R5956 T9158 T9157 prep of,absence
R5957 T9159 T9160 nmod lin15A,homologues
R5958 T9160 T9158 pobj homologues,of
R5959 T9161 T9159 punct ", ",lin15A
R5960 T9162 T9159 conj lin36,lin15A
R5961 T9163 T9162 cc and,lin36
R5962 T9164 T9162 conj lin37,lin36
R5963 T9165 T9157 prep in,absence
R5964 T9166 T9167 amod higher,organisms
R5965 T9167 T9165 pobj organisms,in
R5966 T9168 T9153 punct ", ",explain
R5967 T9169 T9170 mark as,were
R5968 T9170 T9153 advcl were,explain
R5969 T9171 T9170 nsubj they,were
R5970 T9172 T9173 neg no,longer
R5971 T9173 T9170 advmod longer,were
R5972 T9174 T9170 prep under,were
R5973 T9175 T9176 amod selective,pressure
R5974 T9176 T9174 pobj pressure,under
R5975 T9177 T9176 amod evolutionary,pressure
R5976 T9178 T9179 aux to,remain
R5977 T9179 T9176 acl remain,pressure
R5978 T9180 T9179 prep within,remain
R5979 T9181 T9182 det the,complex
R5980 T9182 T9180 pobj complex,within
R5981 T9183 T9170 punct ", ",were
R5982 T9184 T9170 cc and,were
R5983 T9185 T9186 advmod thus,lost
R5984 T9186 T9170 conj lost,were
R5985 T9187 T9186 prep in,lost
R5986 T9188 T9189 det the,genome
R5987 T9189 T9187 pobj genome,in
R5988 T9190 T9189 amod evolving,genome
R5989 T9191 T9153 punct .,explain
R8996 T13875 T13876 advmod In,vitro
R8997 T13876 T13877 amod vitro,interaction
R8998 T13878 T13877 prep of,interaction

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8188 70-80 NCBITaxon:7742 denotes vertebrate
T8189 86-94 CHEBI_PR_EXT:protein denotes proteins
T8190 124-134 NCBITaxon:7742 denotes vertebrate
T8191 321-331 NCBITaxon:7742 denotes vertebrate
T8192 352-360 CHEBI_PR_EXT:protein denotes proteins
T8193 411-419 CHEBI_PR_EXT:protein denotes proteins
T8194 434-444 GO:0005813 denotes centrosome
T8195 445-452 GO:0007067 denotes mitotic
T8196 445-460 GO:0072686 denotes mitotic spindle
T8197 478-486 CHEBI_PR_EXT:protein denotes proteins
T8198 499-503 SO_EXT:0000704 denotes gene
T8199 504-514 GO:0065007 denotes regulation
T8200 539-552 GO_EXT:transcription denotes transcription
T8201 568-571 CHEBI_SO_EXT:RNA denotes RNA
T8202 568-582 GO:0006396 denotes RNA processing
T8203 572-582 SO_EXT:sequence_alteration_process denotes processing
T8204 587-598 GO:0006412 denotes translation
T8205 643-651 CHEBI_PR_EXT:protein denotes proteins
T8206 754-761 CHEBI_PR_EXT:protein denotes protein
T8207 754-769 GO:0043234 denotes protein complex
T8208 846-856 GO:0005813 denotes centrosome
T8209 877-892 GO:0072686 denotes mitotic spindle
T8210 877-901 GO:0090307 denotes mitotic spindle assembly
T8211 907-912 NCBITaxon_EXT:yeast denotes yeast
T8212 1000-1010 NCBITaxon:7742 denotes vertebrate
T8213 1011-1016 PR_EXT:000016008 denotes TACC3
T8214 1017-1024 CHEBI_PR_EXT:protein denotes protein
T8215 1121-1128 GO:0007067 denotes mitosis
T8216 1163-1178 PR_EXT:000004515 denotes Aurora Kinase A
T8217 1170-1176 GO_EXT:0016301 denotes Kinase
T8218 1220-1225 NCBITaxon:9606 denotes human
T8219 1231-1238 CHEBI_PR_EXT:protein denotes protein
T8220 1239-1253 GO_PATO_EXT:phosphorylation_process_or_quality denotes phosphorylated
T8221 1262-1268 CHEBI_GO_SO_EXT:enzyme denotes enzyme
T8222 1315-1321 SO_EXT:0000417 denotes domain
T8223 1329-1339 NCBITaxon:7742 denotes vertebrate
T8224 1340-1351 SO_EXT:0000855 denotes orthologues
T8225 1367-1372 PR_EXT:000016008 denotes TACC3
T8226 1431-1438 NCBITaxon:species denotes species
T8227 1476-1485 NCBITaxon:8355 denotes X. laevis
T8228 1498-1505 CHEBI_PR_EXT:protein denotes protein
T8229 1521-1528 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T8230 1521-1537 _FRAGMENT denotes binding site for
T8231 1548-1555 SO_EXT:0000410 denotes protein
T8232 1542-1547 PR_EXT:000006990 denotes eIF4E
T8233 1548-1555 CHEBI_PR_EXT:protein denotes protein
T8234 1596-1606 _FRAGMENT denotes control of
T8235 1627-1638 GO:0006417 denotes translation
T8236 1607-1622 GO:0043631 denotes polyadenylation
T8237 1646-1653 NCBITaxon:8353 denotes Xenopus
T8238 1654-1660 CL:0000023 denotes oocyte
T8239 1783-1793 NCBITaxon:7742 denotes vertebrate
T8240 1794-1799 PR_EXT:000016008 denotes TACC3
T8241 1800-1808 CHEBI_PR_EXT:protein denotes proteins
T8242 1827-1832 PR_EXT:000006990 denotes eIF4E
T8243 1833-1837 PR_EXT:000005805 denotes CPEB
T8244 1838-1845 GO:0032991 denotes complex
T8245 1851-1856 NCBITaxon:9606 denotes human
T8246 1864-1871 SO_EXT:0001060 denotes isoform
T8247 1903-1908 PR_EXT:000006990 denotes eIF4E
T8248 1909-1913 PR_EXT:000005805 denotes CPEB
T8249 1914-1921 GO:0032991 denotes complex
T8250 1937-1942 PR_EXT:000016006 denotes TACC1
T8251 1943-1951 SO_EXT:0001060 denotes isoforms
T8252 2043-2046 CHEBI_SO_EXT:RNA denotes RNA
T8253 2043-2055 GO:0008380 denotes RNA splicing
T8254 2043-2046 _FRAGMENT denotes RNA
T8255 2060-2069 GO:0050658 denotes transport
T8256 2145-2153 CHEBI_PR_EXT:protein denotes proteins
T8257 2180-2185 NCBITaxon_EXT:yeast denotes yeast
T8258 2226-2234 CHEBI_PR_EXT:protein denotes proteins
T8259 2240-2244 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes bind
T8260 2252-2257 NCBITaxon:9606 denotes human
T8261 2263-2271 CHEBI_PR_EXT:protein denotes proteins
T8262 2314-2319 UBERON:0000955 denotes brain
T8263 2384-2391 PR_EXT:000043452 denotes histone
T8264 2384-2391 CHEBI:15358 denotes histone
T8265 2384-2409 GO_EXT:0004402 denotes histone acetyltransferase
T8266 2410-2417 PR_EXT:Q92830 denotes hGCN5L2
T8267 2450-2457 SO_EXT:0001060 denotes isoform
T8268 2461-2469 CHEBI:26537 denotes retinoid
T8269 2461-2480 GO_EXT:0004886 denotes retinoid-X receptor
T8270 2461-2482 PR_EXT:000014373 denotes retinoid-X receptor β
T8271 2488-2495 CHEBI_PR_EXT:protein denotes protein
T8272 2525-2531 SO_EXT:0000417 denotes domain
T8273 2535-2540 PR_EXT:000016007 denotes TACC2
T8274 2604-2607 GO_PR_EXT:glutathione_S_transferase denotes GST
T8275 2643-2647 PR_EXT:000014373 denotes RXRβ
T8276 2682-2689 GO:0005634 denotes nuclear
T8277 2690-2697 CHEBI_GO_EXT:hormone denotes hormone
T8278 2698-2706 GO_EXT:0004872 denotes receptor
T8279 2708-2714 PR_EXT:Q965W2 denotes nhr-86
T8280 2721-2731 NCBITaxon:6239 denotes C. elegans
T8281 2764-2771 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T8282 2772-2779 CHEBI_PR_EXT:protein denotes protein
T8283 2780-2785 PR_EXT:P34427 denotes lin36
T8284 2822-2832 NCBITaxon:33317 denotes protostome
T8285 2862-2869 CHEBI_PR_EXT:protein denotes protein
T8286 2932-2941 NCBITaxon:1 denotes organisms
T8287 3009-3017 CHEBI_PR_EXT:protein denotes proteins
T8288 3131-3138 SO_EXT:0000417 denotes domains
T8289 3143-3154 SO_EXT:sequence_duplication_entity_or_process denotes duplication
T8290 3162-3170 NCBITaxon:7711 denotes chordate
T8291 3231-3241 NCBITaxon:7742 denotes vertebrate
T8292 3247-3254 CHEBI_PR_EXT:protein denotes protein
T8293 3264-3279 GO_EXT:transcription denotes transcriptional
T8294 3264-3291 GO_EXT:0003713 denotes transcriptional coactivator
T8295 3337-3341 PR_EXT:000004303 denotes ARNT
T8296 3342-3355 GO_EXT:transcription denotes transcription
T8297 3342-3362 GO_EXT:transcription_factor denotes transcription factor
T8298 3399-3411 NCBITaxon:33511 denotes deuterostome
T8299 3425-3431 SO_EXT:sequence_repeat_unit_or_region denotes repeat
T8300 3447-3452 PR_EXT:000017527 denotes GAS41
T8301 3490-3495 NCBITaxon:9606 denotes human
T8302 3496-3532 GO:0016514 denotes SWI/SNF chromatin remodeling complex
T8303 3504-3524 GO:0006338 denotes chromatin remodeling
T8304 3561-3576 NCBITaxon:7227 denotes D. melanogaster
T8305 3577-3586 SO_EXT:0000853 denotes homologue
T8306 3590-3595 PR_EXT:000017527 denotes GAS41
T8307 3754-3767 SO_EXT:0000657 denotes repeat region
T8308 3775-3785 NCBITaxon:7215 denotes Drosophila
T8309 3791-3798 CHEBI_PR_EXT:protein denotes protein
T8310 3831-3841 NCBITaxon:7742 denotes vertebrate
T8311 3905-3920 GO_EXT:transcription denotes transcriptional
T8312 3921-3931 GO:0065007 denotes regulatory
T8313 3932-3941 GO:0032991 denotes complexes
T8314 3952-3960 GO:0030674 denotes bridging
T8315 3961-3971 CHEBI_PR_EXT:protein denotes protein(s)
T8316 4018-4025 CHEBI_PR_EXT:protein denotes protein
T8317 4055-4061 SO_EXT:0000417 denotes domain
T8318 4118-4129 NCBITaxon:33317 denotes protostomes
T8319 4134-4147 NCBITaxon:33511 denotes deuterostomes
T8320 4197-4205 GO:0030674 denotes bridging
T8321 4206-4213 CHEBI_PR_EXT:protein denotes protein
T8322 4228-4234 PR_EXT:Q27365 denotes lin15A
T8323 4236-4241 PR_EXT:P34427 denotes lin36
T8324 4245-4250 PR_EXT:000009822 denotes lin37
T8325 4290-4296 PR_EXT:Q27365 denotes lin15A
T8326 4298-4303 PR_EXT:P34427 denotes lin36
T8327 4308-4313 PR_EXT:000009822 denotes lin37
T8328 4314-4324 SO_EXT:0000853 denotes homologues
T8329 4335-4344 NCBITaxon:1 denotes organisms
T8330 4428-4435 GO:0032991 denotes complex
T8331 4467-4473 SO_EXT:0001026 denotes genome
T13860 4519-4525 PR_EXT:000016007 denotes TACC2s
T13861 4560-4563 CHEBI:8984 denotes SDS
T13862 4564-4578 CHEBI_EXT:polyacrylamide denotes polyacrylamide
T13863 4597-4607 GO:0006412 denotes translated
T13864 4614-4623 SO_EXT:engineered_biological_sequence denotes construct
T13865 4641-4644 GO_PR_EXT:glutathione_S_transferase denotes GST
T13866 4645-4650 PR_EXT:000016007 denotes TACC2
T13867 4663-4666 GO_PR_EXT:glutathione_S_transferase denotes GST
T13868 4706-4716 GO:0006412 denotes translated
T13869 4717-4720 GO_EXT:0004886 denotes RXR
T13870 4717-4722 PR_EXT:000014373 denotes RXR-β
T13871 4723-4730 CHEBI_PR_EXT:protein denotes protein
T13872 4831-4834 GO_PR_EXT:glutathione_S_transferase denotes GST
T13873 4835-4840 PR_EXT:000016007 denotes TACC2
T13874 4845-4848 GO_PR_EXT:glutathione_S_transferase denotes GST
R5174 T8231 T8230 _lexicallyChainedTo protein,binding site for
R5175 T8235 T8234 _lexicallyChainedTo translation,control of
R5176 T8255 T8254 _lexicallyChainedTo transport,RNA

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8091 70-80 NCBITaxon:7742 denotes vertebrate
T8092 124-134 NCBITaxon:7742 denotes vertebrate
T8093 321-331 NCBITaxon:7742 denotes vertebrate
T8094 434-444 GO:0005813 denotes centrosome
T8095 445-452 GO:0007067 denotes mitotic
T8096 445-460 GO:0072686 denotes mitotic spindle
T8097 499-503 SO:0000704 denotes gene
T8098 504-514 GO:0065007 denotes regulation
T8099 568-582 GO:0006396 denotes RNA processing
T8100 587-598 GO:0006412 denotes translation
T8101 754-769 GO:0043234 denotes protein complex
T8102 846-856 GO:0005813 denotes centrosome
T8103 877-892 GO:0072686 denotes mitotic spindle
T8104 877-901 GO:0090307 denotes mitotic spindle assembly
T8105 1000-1010 NCBITaxon:7742 denotes vertebrate
T8106 1011-1016 PR:000016008 denotes TACC3
T8107 1121-1128 GO:0007067 denotes mitosis
T8108 1163-1178 PR:000004515 denotes Aurora Kinase A
T8109 1220-1225 NCBITaxon:9606 denotes human
T8110 1315-1321 SO:0000417 denotes domain
T8111 1329-1339 NCBITaxon:7742 denotes vertebrate
T8112 1340-1351 SO:0000855 denotes orthologues
T8113 1367-1372 PR:000016008 denotes TACC3
T8114 1431-1438 NCBITaxon:species denotes species
T8115 1476-1485 NCBITaxon:8355 denotes X. laevis
T8116 1521-1537 _FRAGMENT denotes binding site for
T8117 1548-1555 SO:0000410 denotes protein
T8118 1542-1547 PR:000006990 denotes eIF4E
T8119 1596-1606 _FRAGMENT denotes control of
T8120 1627-1638 GO:0006417 denotes translation
T8121 1607-1622 GO:0043631 denotes polyadenylation
T8122 1646-1653 NCBITaxon:8353 denotes Xenopus
T8123 1654-1660 CL:0000023 denotes oocyte
T8124 1783-1793 NCBITaxon:7742 denotes vertebrate
T8125 1794-1799 PR:000016008 denotes TACC3
T8126 1827-1832 PR:000006990 denotes eIF4E
T8127 1833-1837 PR:000005805 denotes CPEB
T8128 1838-1845 GO:0032991 denotes complex
T8129 1851-1856 NCBITaxon:9606 denotes human
T8130 1864-1871 SO:0001060 denotes isoform
T8131 1903-1908 PR:000006990 denotes eIF4E
T8132 1909-1913 PR:000005805 denotes CPEB
T8133 1914-1921 GO:0032991 denotes complex
T8134 1937-1942 PR:000016006 denotes TACC1
T8135 1943-1951 SO:0001060 denotes isoforms
T8136 2043-2055 GO:0008380 denotes RNA splicing
T8137 2043-2046 _FRAGMENT denotes RNA
T8138 2060-2069 GO:0050658 denotes transport
T8139 2252-2257 NCBITaxon:9606 denotes human
T8140 2314-2319 UBERON:0000955 denotes brain
T8141 2384-2391 PR:000043452 denotes histone
T8142 2384-2391 CHEBI:15358 denotes histone
T8143 2410-2417 PR:Q92830 denotes hGCN5L2
T8144 2450-2457 SO:0001060 denotes isoform
T8145 2461-2469 CHEBI:26537 denotes retinoid
T8146 2461-2482 PR:000014373 denotes retinoid-X receptor β
T8147 2525-2531 SO:0000417 denotes domain
T8148 2535-2540 PR:000016007 denotes TACC2
T8149 2643-2647 PR:000014373 denotes RXRβ
T8150 2682-2689 GO:0005634 denotes nuclear
T8151 2708-2714 PR:Q965W2 denotes nhr-86
T8152 2721-2731 NCBITaxon:6239 denotes C. elegans
T8153 2780-2785 PR:P34427 denotes lin36
T8154 2822-2832 NCBITaxon:33317 denotes protostome
T8155 2932-2941 NCBITaxon:1 denotes organisms
T8156 3131-3138 SO:0000417 denotes domains
T8157 3162-3170 NCBITaxon:7711 denotes chordate
T8158 3231-3241 NCBITaxon:7742 denotes vertebrate
T8159 3337-3341 PR:000004303 denotes ARNT
T8160 3399-3411 NCBITaxon:33511 denotes deuterostome
T8161 3447-3452 PR:000017527 denotes GAS41
T8162 3490-3495 NCBITaxon:9606 denotes human
T8163 3496-3532 GO:0016514 denotes SWI/SNF chromatin remodeling complex
T8164 3504-3524 GO:0006338 denotes chromatin remodeling
T8165 3561-3576 NCBITaxon:7227 denotes D. melanogaster
T8166 3577-3586 SO:0000853 denotes homologue
T8167 3590-3595 PR:000017527 denotes GAS41
T8168 3754-3767 SO:0000657 denotes repeat region
T8169 3775-3785 NCBITaxon:7215 denotes Drosophila
T8170 3831-3841 NCBITaxon:7742 denotes vertebrate
T8171 3921-3931 GO:0065007 denotes regulatory
T8172 3932-3941 GO:0032991 denotes complexes
T8173 3952-3960 GO:0030674 denotes bridging
T8174 4055-4061 SO:0000417 denotes domain
T8175 4118-4129 NCBITaxon:33317 denotes protostomes
T8176 4134-4147 NCBITaxon:33511 denotes deuterostomes
T8177 4197-4205 GO:0030674 denotes bridging
T8178 4228-4234 PR:Q27365 denotes lin15A
T8179 4236-4241 PR:P34427 denotes lin36
T8180 4245-4250 PR:000009822 denotes lin37
T8181 4290-4296 PR:Q27365 denotes lin15A
T8182 4298-4303 PR:P34427 denotes lin36
T8183 4308-4313 PR:000009822 denotes lin37
T8184 4314-4324 SO:0000853 denotes homologues
T8185 4335-4344 NCBITaxon:1 denotes organisms
T8186 4428-4435 GO:0032991 denotes complex
T8187 4467-4473 SO:0001026 denotes genome
T13853 4519-4525 PR:000016007 denotes TACC2s
T13854 4560-4563 CHEBI:8984 denotes SDS
T13855 4597-4607 GO:0006412 denotes translated
T13856 4645-4650 PR:000016007 denotes TACC2
T13857 4706-4716 GO:0006412 denotes translated
T13858 4717-4722 PR:000014373 denotes RXR-β
T13859 4835-4840 PR:000016007 denotes TACC2
R5171 T8117 T8116 _lexicallyChainedTo protein,binding site for
R5172 T8120 T8119 _lexicallyChainedTo translation,control of
R5173 T8138 T8137 _lexicallyChainedTo transport,RNA

2_test

Id Subject Object Predicate Lexical cue
15207008-12620397-9666042 600-601 12620397 denotes 3
15207008-12956952-9666043 602-603 12956952 denotes 5
15207008-12956951-9666043 602-603 12956951 denotes 5
15207008-11025203-9666043 602-603 11025203 denotes 5
15207008-11903063-9666044 606-608 11903063 denotes 15
15207008-12165861-9666045 609-611 12165861 denotes 19
15207008-14603251-9666045 609-611 14603251 denotes 19
15207008-14602875-9666045 609-611 14602875 denotes 19
15207008-11433296-9666046 615-617 11433296 denotes 24
15207008-11827981-9666047 618-620 11827981 denotes 25
15207008-11847113-9666048 621-623 11847113 denotes 33
15207008-14767476-9666049 624-626 14767476 denotes 34
15207008-12956952-9666050 943-944 12956952 denotes 5
15207008-12956951-9666051 945-946 12956951 denotes 6
15207008-14602875-9666052 947-949 14602875 denotes 21
15207008-12970190-9666052 947-949 12970190 denotes 21
15207008-12569123-9666052 947-949 12569123 denotes 21
15207008-11433296-9666052 947-949 11433296 denotes 21
15207008-11121038-9666053 1130-1132 11121038 denotes 27
15207008-14602875-9666054 1270-1272 14602875 denotes 21
15207008-10635326-9666055 1662-1663 10635326 denotes 8
15207008-11081630-9666056 1664-1666 11081630 denotes 35
15207008-12165861-9666057 2081-2083 12165861 denotes 19
15207008-12620397-9666058 2273-2274 12620397 denotes 3
15207008-14767476-9666059 2275-2277 14767476 denotes 34
15207008-14767476-9666060 2419-2421 14767476 denotes 34
15207008-11025203-9666061 3364-3365 11025203 denotes 7
15207008-12620397-9666062 3534-3535 12620397 denotes 3
15207008-11903063-9666063 3536-3538 11903063 denotes 15