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PMC:441373 / 3097-4889 JSONTXT

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Id Subject Object Predicate Lexical cue
T883 0-3 DT denotes The
T884 42-46 NN denotes gene
T885 4-9 JJ denotes first
T886 10-22 NN denotes Transforming
T887 23-29 JJ denotes acidic
T888 30-36 VBN denotes coiled
T889 37-41 NN denotes coil
T890 59-69 VBN denotes identified
T891 46-48 , denotes ,
T892 48-53 NN denotes TACC1
T893 53-55 , denotes ,
T894 55-58 VBD denotes was
T895 70-76 IN denotes during
T896 77-80 DT denotes the
T897 81-92 NN denotes development
T898 93-95 IN denotes of
T899 96-98 DT denotes an
T900 110-113 NN denotes map
T901 99-109 NN denotes expression
T902 114-116 IN denotes of
T903 117-120 DT denotes the
T904 136-139 NN denotes arm
T905 121-129 JJ denotes proximal
T906 130-135 JJ denotes short
T907 140-142 IN denotes of
T908 143-148 JJ denotes human
T909 149-159 NN denotes chromosome
T910 160-161 CD denotes 8
T911 162-163 -LRB- denotes [
T912 163-164 CD denotes 1
T913 164-165 -RRB- denotes ]
T914 165-166 . denotes .
T915 166-371 sentence denotes Two additional TACC family members were subsequently identified and mapped to paralogous chromosomal regions on human chromosomes 4p16 and 10q26, physically close to members of the FGFR gene family [1-3].
T916 167-170 CD denotes Two
T917 194-201 NNS denotes members
T918 171-181 JJ denotes additional
T919 182-186 NN denotes TACC
T920 187-193 NN denotes family
T921 220-230 VBN denotes identified
T922 202-206 VBD denotes were
T923 207-219 RB denotes subsequently
T924 231-234 CC denotes and
T925 235-241 VBN denotes mapped
T926 242-244 IN denotes to
T927 245-255 JJ denotes paralogous
T928 268-275 NNS denotes regions
T929 256-267 JJ denotes chromosomal
T930 276-278 IN denotes on
T931 279-284 JJ denotes human
T932 297-301 NN denotes 4p16
T933 285-296 NNS denotes chromosomes
T934 302-305 CC denotes and
T935 306-311 NN denotes 10q26
T936 311-313 , denotes ,
T937 313-323 RB denotes physically
T938 324-329 JJ denotes close
T939 330-332 IN denotes to
T940 333-340 NNS denotes members
T941 341-343 IN denotes of
T942 344-347 DT denotes the
T943 358-364 NN denotes family
T944 348-352 NN denotes FGFR
T945 353-357 NN denotes gene
T946 365-366 -LRB- denotes [
T947 366-367 CD denotes 1
T948 367-368 SYM denotes -
T949 368-369 CD denotes 3
T950 369-370 -RRB- denotes ]
T951 370-371 . denotes .
T952 371-625 sentence denotes This mapping data, together with identification of a single TACC gene in the protostomes Caenorhabitis elegans, and Drosophila melanogaster [4-6], led to the speculation that the ancestral FGFR and TACC genes were located physically close to each other.
T953 372-376 DT denotes This
T954 385-389 NNS denotes data
T955 377-384 NN denotes mapping
T956 519-522 VBD denotes led
T957 389-391 , denotes ,
T958 391-399 RB denotes together
T959 400-404 IN denotes with
T960 405-419 NN denotes identification
T961 420-422 IN denotes of
T962 423-424 DT denotes a
T963 437-441 NN denotes gene
T964 425-431 JJ denotes single
T965 432-436 NN denotes TACC
T966 442-444 IN denotes in
T967 445-448 DT denotes the
T968 475-482 NNP denotes elegans
T969 449-460 NNS denotes protostomes
T970 461-474 NNP denotes Caenorhabitis
T971 482-484 , denotes ,
T972 484-487 CC denotes and
T973 488-498 NNP denotes Drosophila
T974 499-511 NNP denotes melanogaster
T975 512-513 -LRB- denotes [
T976 513-514 CD denotes 4
T977 514-515 SYM denotes -
T978 515-516 CD denotes 6
T979 516-517 -RRB- denotes ]
T980 517-519 , denotes ,
T981 523-525 IN denotes to
T982 526-529 DT denotes the
T983 530-541 NN denotes speculation
T984 542-546 IN denotes that
T985 586-593 VBN denotes located
T986 547-550 DT denotes the
T987 575-580 NNS denotes genes
T988 551-560 JJ denotes ancestral
T989 561-565 NN denotes FGFR
T990 566-569 CC denotes and
T991 570-574 NN denotes TACC
T992 581-585 VBD denotes were
T993 594-604 RB denotes physically
T994 605-610 RB denotes close
T995 611-613 IN denotes to
T996 614-618 DT denotes each
T997 619-624 JJ denotes other
T998 624-625 . denotes .
T999 625-817 sentence denotes Thus, during the evolution of vertebrates, subsequent successive duplications of the ancestral gene cluster have given rise to three TACC family members located close to FGFR genes in humans.
T1000 626-630 RB denotes Thus
T1001 739-744 VBN denotes given
T1002 630-632 , denotes ,
T1003 632-638 IN denotes during
T1004 639-642 DT denotes the
T1005 643-652 NN denotes evolution
T1006 653-655 IN denotes of
T1007 656-667 NNS denotes vertebrates
T1008 667-669 , denotes ,
T1009 669-679 JJ denotes subsequent
T1010 691-703 NNS denotes duplications
T1011 680-690 JJ denotes successive
T1012 704-706 IN denotes of
T1013 707-710 DT denotes the
T1014 726-733 NN denotes cluster
T1015 711-720 JJ denotes ancestral
T1016 721-725 NN denotes gene
T1017 734-738 VBP denotes have
T1018 745-749 NN denotes rise
T1019 750-752 IN denotes to
T1020 753-758 CD denotes three
T1021 771-778 NNS denotes members
T1022 759-763 NN denotes TACC
T1023 764-770 NN denotes family
T1024 779-786 VBN denotes located
T1025 787-792 RB denotes close
T1026 793-795 IN denotes to
T1027 796-800 NN denotes FGFR
T1028 801-806 NNS denotes genes
T1029 807-809 IN denotes in
T1030 810-816 NNS denotes humans
T1031 816-817 . denotes .
T1032 817-1060 sentence denotes In accordance with the proposed quadruplication of the vertebrate genome during evolution, there is a fourth FGFR family member in vertebrates, raising the question of whether a fourth TACC gene is associated with FGFR4 in vertebrate genomes.
T1033 818-820 IN denotes In
T1034 915-917 VBZ denotes is
T1035 821-831 NN denotes accordance
T1036 832-836 IN denotes with
T1037 837-840 DT denotes the
T1038 850-865 NN denotes quadruplication
T1039 841-849 VBN denotes proposed
T1040 866-868 IN denotes of
T1041 869-872 DT denotes the
T1042 884-890 NN denotes genome
T1043 873-883 NN denotes vertebrate
T1044 891-897 IN denotes during
T1045 898-907 NN denotes evolution
T1046 907-909 , denotes ,
T1047 909-914 EX denotes there
T1048 918-919 DT denotes a
T1049 939-945 NN denotes member
T1050 920-926 JJ denotes fourth
T1051 927-931 NN denotes FGFR
T1052 932-938 NN denotes family
T1053 946-948 IN denotes in
T1054 949-960 NNS denotes vertebrates
T1055 960-962 , denotes ,
T1056 962-969 VBG denotes raising
T1057 970-973 DT denotes the
T1058 974-982 NN denotes question
T1059 983-985 IN denotes of
T1060 986-993 IN denotes whether
T1061 1016-1026 VBN denotes associated
T1062 994-995 DT denotes a
T1063 1008-1012 NN denotes gene
T1064 996-1002 JJ denotes fourth
T1065 1003-1007 NN denotes TACC
T1066 1013-1015 VBZ denotes is
T1067 1027-1031 IN denotes with
T1068 1032-1037 NN denotes FGFR4
T1069 1038-1040 IN denotes in
T1070 1041-1051 NN denotes vertebrate
T1071 1052-1059 NNS denotes genomes
T1072 1059-1060 . denotes .
T1073 1060-1221 sentence denotes To date, only three active TACC genes have been cloned in humans [1-3], one in each of mouse [7], Xenopus laevis [8], D. melanogaster [4], and C. elegans [5,6].
T1074 1061-1063 IN denotes To
T1075 1133-1136 CD denotes one
T1076 1064-1068 NN denotes date
T1077 1068-1070 , denotes ,
T1078 1070-1074 RB denotes only
T1079 1093-1098 NNS denotes genes
T1080 1075-1080 CD denotes three
T1081 1081-1087 JJ denotes active
T1082 1088-1092 NN denotes TACC
T1083 1109-1115 VBN denotes cloned
T1084 1099-1103 VBP denotes have
T1085 1104-1108 VBN denotes been
T1086 1116-1118 IN denotes in
T1087 1119-1125 NNS denotes humans
T1088 1126-1127 -LRB- denotes [
T1089 1127-1128 CD denotes 1
T1090 1128-1129 SYM denotes -
T1091 1129-1130 CD denotes 3
T1092 1130-1131 -RRB- denotes ]
T1093 1131-1133 , denotes ,
T1094 1137-1139 IN denotes in
T1095 1140-1144 DT denotes each
T1096 1145-1147 IN denotes of
T1097 1148-1153 NN denotes mouse
T1098 1154-1155 -LRB- denotes [
T1099 1155-1156 CD denotes 7
T1100 1156-1157 -RRB- denotes ]
T1101 1157-1159 , denotes ,
T1102 1159-1166 NNP denotes Xenopus
T1103 1167-1173 NNP denotes laevis
T1104 1174-1175 -LRB- denotes [
T1105 1175-1176 CD denotes 8
T1106 1176-1177 -RRB- denotes ]
T1107 1177-1179 , denotes ,
T1108 1179-1181 NNP denotes D.
T1109 1182-1194 NNP denotes melanogaster
T1110 1195-1196 -LRB- denotes [
T1111 1196-1197 CD denotes 4
T1112 1197-1198 -RRB- denotes ]
T1113 1198-1200 , denotes ,
T1114 1200-1203 CC denotes and
T1115 1204-1206 NNP denotes C.
T1116 1207-1214 NNP denotes elegans
T1117 1215-1216 -LRB- denotes [
T1118 1218-1219 CD denotes 6
T1119 1216-1217 CD denotes 5
T1120 1217-1218 , denotes ,
T1121 1219-1220 -RRB- denotes ]
T1122 1220-1221 . denotes .
T1123 1221-1440 sentence denotes Although two additional new candidate TACC family members, Oryctolagus cuniculus TACC4 [9] and human RHAMM [10] have been proposed, their true identity and placement in the evolution of the TACC family is under debate.
T1124 1222-1230 IN denotes Although
T1125 1344-1352 VBN denotes proposed
T1126 1231-1234 CD denotes two
T1127 1272-1279 NNS denotes members
T1128 1235-1245 JJ denotes additional
T1129 1246-1249 JJ denotes new
T1130 1250-1259 NN denotes candidate
T1131 1260-1264 NN denotes TACC
T1132 1265-1271 NN denotes family
T1133 1279-1281 , denotes ,
T1134 1281-1292 NNP denotes Oryctolagus
T1135 1303-1308 NN denotes TACC4
T1136 1293-1302 NNP denotes cuniculus
T1137 1309-1310 -LRB- denotes [
T1138 1310-1311 CD denotes 9
T1139 1311-1312 -RRB- denotes ]
T1140 1313-1316 CC denotes and
T1141 1317-1322 JJ denotes human
T1142 1323-1328 NN denotes RHAMM
T1143 1329-1330 -LRB- denotes [
T1144 1330-1332 CD denotes 10
T1145 1332-1333 -RRB- denotes ]
T1146 1334-1338 VBP denotes have
T1147 1339-1343 VBN denotes been
T1148 1424-1426 VBZ denotes is
T1149 1352-1354 , denotes ,
T1150 1354-1359 PRP$ denotes their
T1151 1365-1373 NN denotes identity
T1152 1360-1364 JJ denotes true
T1153 1374-1377 CC denotes and
T1154 1378-1387 NN denotes placement
T1155 1388-1390 IN denotes in
T1156 1391-1394 DT denotes the
T1157 1395-1404 NN denotes evolution
T1158 1405-1407 IN denotes of
T1159 1408-1411 DT denotes the
T1160 1417-1423 NN denotes family
T1161 1412-1416 NN denotes TACC
T1162 1427-1432 IN denotes under
T1163 1433-1439 NN denotes debate
T1164 1439-1440 . denotes .
T1165 1440-1792 sentence denotes Thus, the identification and functional characterization of new members of the TACC family in other organisms, alternatively spliced isoforms of each TACC and comparison of the phylogenetic relationship of these genes relative to other members of the coiled coil superfamily will resolve this issue and provide clues to the evolution of TACC function.
T1166 1441-1445 RB denotes Thus
T1167 1721-1728 VB denotes resolve
T1168 1445-1447 , denotes ,
T1169 1447-1450 DT denotes the
T1170 1451-1465 NN denotes identification
T1171 1466-1469 CC denotes and
T1172 1470-1480 JJ denotes functional
T1173 1481-1497 NN denotes characterization
T1174 1498-1500 IN denotes of
T1175 1501-1504 JJ denotes new
T1176 1505-1512 NNS denotes members
T1177 1513-1515 IN denotes of
T1178 1516-1519 DT denotes the
T1179 1525-1531 NN denotes family
T1180 1520-1524 NN denotes TACC
T1181 1532-1534 IN denotes in
T1182 1535-1540 JJ denotes other
T1183 1541-1550 NNS denotes organisms
T1184 1550-1552 , denotes ,
T1185 1552-1565 RB denotes alternatively
T1186 1566-1573 VBN denotes spliced
T1187 1574-1582 NNS denotes isoforms
T1188 1583-1585 IN denotes of
T1189 1586-1590 DT denotes each
T1190 1591-1595 NN denotes TACC
T1191 1596-1599 CC denotes and
T1192 1600-1610 NN denotes comparison
T1193 1611-1613 IN denotes of
T1194 1614-1617 DT denotes the
T1195 1631-1643 NN denotes relationship
T1196 1618-1630 JJ denotes phylogenetic
T1197 1644-1646 IN denotes of
T1198 1647-1652 DT denotes these
T1199 1653-1658 NNS denotes genes
T1200 1659-1667 JJ denotes relative
T1201 1668-1670 IN denotes to
T1202 1671-1676 JJ denotes other
T1203 1677-1684 NNS denotes members
T1204 1685-1687 IN denotes of
T1205 1688-1691 DT denotes the
T1206 1704-1715 NN denotes superfamily
T1207 1692-1698 VBN denotes coiled
T1208 1699-1703 NN denotes coil
T1209 1716-1720 MD denotes will
T1210 1729-1733 DT denotes this
T1211 1734-1739 NN denotes issue
T1212 1740-1743 CC denotes and
T1213 1744-1751 VB denotes provide
T1214 1752-1757 NNS denotes clues
T1215 1758-1760 IN denotes to
T1216 1761-1764 DT denotes the
T1217 1765-1774 NN denotes evolution
T1218 1775-1777 IN denotes of
T1219 1778-1782 NN denotes TACC
T1220 1783-1791 NN denotes function
T1221 1791-1792 . denotes .
R486 T883 T884 det The,gene
R488 T885 T884 amod first,gene
R489 T886 T884 nmod Transforming,gene
R490 T887 T884 amod acidic,gene
R491 T888 T889 amod coiled,coil
R492 T889 T884 compound coil,gene
R493 T891 T884 punct ", ",gene
R494 T892 T884 appos TACC1,gene
R495 T893 T890 punct ", ",identified
R496 T894 T890 auxpass was,identified
R497 T895 T890 prep during,identified
R498 T896 T897 det the,development
R499 T897 T895 pobj development,during
R500 T898 T897 prep of,development
R501 T899 T900 det an,map
R502 T900 T898 pobj map,of
R503 T901 T900 compound expression,map
R504 T902 T900 prep of,map
R505 T903 T904 det the,arm
R506 T904 T902 pobj arm,of
R507 T905 T904 amod proximal,arm
R508 T906 T904 amod short,arm
R509 T907 T904 prep of,arm
R510 T908 T909 amod human,chromosome
R511 T909 T907 pobj chromosome,of
R512 T910 T909 nummod 8,chromosome
R513 T911 T912 punct [,1
R514 T912 T890 parataxis 1,identified
R515 T913 T912 punct ],1
R516 T914 T890 punct .,identified
R517 T916 T917 nummod Two,members
R518 T917 T921 nsubjpass members,identified
R519 T918 T917 amod additional,members
R520 T919 T917 compound TACC,members
R521 T920 T917 compound family,members
R522 T922 T921 auxpass were,identified
R523 T923 T921 advmod subsequently,identified
R524 T924 T921 cc and,identified
R525 T925 T921 conj mapped,identified
R526 T926 T925 prep to,mapped
R527 T927 T928 amod paralogous,regions
R528 T928 T926 pobj regions,to
R529 T929 T928 amod chromosomal,regions
R530 T930 T928 prep on,regions
R531 T931 T932 amod human,4p16
R532 T932 T930 pobj 4p16,on
R533 T933 T932 compound chromosomes,4p16
R534 T934 T932 cc and,4p16
R535 T935 T932 conj 10q26,4p16
R536 T936 T932 punct ", ",4p16
R537 T937 T938 advmod physically,close
R538 T938 T932 amod close,4p16
R539 T939 T938 prep to,close
R540 T940 T939 pobj members,to
R541 T941 T940 prep of,members
R542 T942 T943 det the,family
R543 T943 T941 pobj family,of
R544 T944 T943 compound FGFR,family
R545 T945 T943 compound gene,family
R546 T946 T947 punct [,1
R547 T947 T925 parataxis 1,mapped
R548 T948 T949 punct -,3
R549 T949 T947 prep 3,1
R550 T950 T947 punct ],1
R551 T951 T921 punct .,identified
R552 T953 T954 det This,data
R553 T954 T956 nsubj data,led
R554 T955 T954 compound mapping,data
R555 T957 T954 punct ", ",data
R556 T958 T959 advmod together,with
R557 T959 T954 prep with,data
R558 T960 T959 pobj identification,with
R559 T961 T960 prep of,identification
R560 T962 T963 det a,gene
R561 T963 T961 pobj gene,of
R562 T964 T963 amod single,gene
R563 T965 T963 compound TACC,gene
R564 T966 T960 prep in,identification
R565 T967 T968 det the,elegans
R566 T968 T966 pobj elegans,in
R567 T969 T968 compound protostomes,elegans
R568 T970 T968 compound Caenorhabitis,elegans
R569 T971 T968 punct ", ",elegans
R570 T972 T968 cc and,elegans
R571 T973 T974 compound Drosophila,melanogaster
R572 T974 T968 conj melanogaster,elegans
R573 T975 T976 punct [,4
R574 T976 T954 parataxis 4,data
R575 T977 T978 punct -,6
R576 T978 T976 prep 6,4
R577 T979 T976 punct ],4
R578 T980 T956 punct ", ",led
R579 T981 T956 prep to,led
R580 T982 T983 det the,speculation
R581 T983 T981 pobj speculation,to
R582 T984 T985 mark that,located
R583 T985 T983 acl located,speculation
R584 T986 T987 det the,genes
R585 T987 T985 nsubjpass genes,located
R586 T988 T987 amod ancestral,genes
R587 T989 T987 nmod FGFR,genes
R588 T990 T989 cc and,FGFR
R589 T991 T989 conj TACC,FGFR
R590 T992 T985 auxpass were,located
R591 T993 T994 advmod physically,close
R592 T994 T985 advmod close,located
R593 T995 T994 prep to,close
R594 T996 T997 det each,other
R595 T997 T995 pobj other,to
R596 T998 T956 punct .,led
R597 T1000 T1001 advmod Thus,given
R598 T1002 T1001 punct ", ",given
R599 T1003 T1001 prep during,given
R600 T1004 T1005 det the,evolution
R601 T1005 T1003 pobj evolution,during
R602 T1006 T1005 prep of,evolution
R603 T1007 T1006 pobj vertebrates,of
R604 T1008 T1001 punct ", ",given
R605 T1009 T1010 amod subsequent,duplications
R606 T1010 T1001 nsubj duplications,given
R607 T1011 T1010 amod successive,duplications
R608 T1012 T1010 prep of,duplications
R609 T1013 T1014 det the,cluster
R610 T1014 T1012 pobj cluster,of
R611 T1015 T1014 amod ancestral,cluster
R612 T1016 T1014 compound gene,cluster
R613 T1017 T1001 aux have,given
R614 T1018 T1001 dobj rise,given
R615 T1019 T1001 prep to,given
R616 T1020 T1021 nummod three,members
R617 T1021 T1019 pobj members,to
R618 T1022 T1021 compound TACC,members
R619 T1023 T1021 compound family,members
R620 T1024 T1021 acl located,members
R621 T1025 T1024 advmod close,located
R622 T1026 T1025 prep to,close
R623 T1027 T1028 compound FGFR,genes
R624 T1028 T1026 pobj genes,to
R625 T1029 T1024 prep in,located
R626 T1030 T1029 pobj humans,in
R627 T1031 T1001 punct .,given
R628 T1033 T1034 prep In,is
R629 T1035 T1033 pobj accordance,In
R630 T1036 T1035 prep with,accordance
R631 T1037 T1038 det the,quadruplication
R632 T1038 T1036 pobj quadruplication,with
R633 T1039 T1038 amod proposed,quadruplication
R634 T1040 T1038 prep of,quadruplication
R635 T1041 T1042 det the,genome
R636 T1042 T1040 pobj genome,of
R637 T1043 T1042 compound vertebrate,genome
R638 T1044 T1038 prep during,quadruplication
R639 T1045 T1044 pobj evolution,during
R640 T1046 T1034 punct ", ",is
R641 T1047 T1034 expl there,is
R642 T1048 T1049 det a,member
R643 T1049 T1034 attr member,is
R644 T1050 T1049 amod fourth,member
R645 T1051 T1049 compound FGFR,member
R646 T1052 T1049 compound family,member
R647 T1053 T1034 prep in,is
R648 T1054 T1053 pobj vertebrates,in
R649 T1055 T1034 punct ", ",is
R650 T1056 T1034 advcl raising,is
R651 T1057 T1058 det the,question
R652 T1058 T1056 dobj question,raising
R653 T1059 T1058 prep of,question
R654 T1060 T1061 mark whether,associated
R656 T1062 T1063 det a,gene
R657 T1063 T1061 nsubjpass gene,associated
R658 T1064 T1063 amod fourth,gene
R659 T1065 T1063 compound TACC,gene
R660 T1066 T1061 auxpass is,associated
R661 T1067 T1061 prep with,associated
R662 T1068 T1067 pobj FGFR4,with
R663 T1069 T1061 prep in,associated
R664 T1070 T1071 compound vertebrate,genomes
R665 T1071 T1069 pobj genomes,in
R666 T1072 T1034 punct .,is
R667 T1074 T1075 prep To,one
R668 T1076 T1074 pobj date,To
R669 T1077 T1075 punct ", ",one
R670 T1078 T1079 advmod only,genes
R671 T1079 T1083 nsubjpass genes,cloned
R672 T1080 T1079 nummod three,genes
R673 T1081 T1079 amod active,genes
R674 T1082 T1079 compound TACC,genes
R675 T1083 T1075 ccomp cloned,one
R676 T1084 T1083 aux have,cloned
R677 T1085 T1083 auxpass been,cloned
R678 T1086 T1083 prep in,cloned
R679 T1087 T1086 pobj humans,in
R680 T1088 T1089 punct [,1
R681 T1089 T1083 parataxis 1,cloned
R682 T1090 T1091 punct -,3
R683 T1091 T1089 prep 3,1
R684 T1092 T1089 punct ],1
R685 T1093 T1075 punct ", ",one
R686 T1094 T1075 prep in,one
R687 T1095 T1094 pobj each,in
R688 T1096 T1095 prep of,each
R689 T1097 T1096 pobj mouse,of
R690 T1098 T1099 punct [,7
R691 T1099 T1097 parataxis 7,mouse
R692 T1100 T1099 punct ],7
R693 T1101 T1097 punct ", ",mouse
R694 T1102 T1103 compound Xenopus,laevis
R695 T1103 T1097 conj laevis,mouse
R696 T1104 T1105 punct [,8
R697 T1105 T1103 parataxis 8,laevis
R698 T1106 T1105 punct ],8
R699 T1107 T1103 punct ", ",laevis
R700 T1108 T1109 compound D.,melanogaster
R701 T1109 T1103 conj melanogaster,laevis
R702 T1110 T1111 punct [,4
R703 T1111 T1109 parataxis 4,melanogaster
R704 T1112 T1111 punct ],4
R705 T1113 T1109 punct ", ",melanogaster
R706 T1114 T1109 cc and,melanogaster
R707 T1115 T1116 compound C.,elegans
R708 T1116 T1109 conj elegans,melanogaster
R709 T1117 T1118 punct [,6
R710 T1118 T1116 parataxis 6,elegans
R711 T1119 T1118 nummod 5,6
R712 T1120 T1118 punct ",",6
R713 T1121 T1118 punct ],6
R714 T1122 T1075 punct .,one
R715 T1124 T1125 mark Although,proposed
R716 T1125 T1148 advcl proposed,is
R717 T1126 T1127 nummod two,members
R718 T1127 T1125 nsubjpass members,proposed
R719 T1128 T1127 amod additional,members
R720 T1129 T1127 amod new,members
R721 T1130 T1127 compound candidate,members
R722 T1131 T1127 compound TACC,members
R723 T1132 T1127 compound family,members
R724 T1133 T1127 punct ", ",members
R725 T1134 T1135 compound Oryctolagus,TACC4
R726 T1135 T1127 appos TACC4,members
R727 T1136 T1135 compound cuniculus,TACC4
R728 T1137 T1138 punct [,9
R729 T1138 T1135 parataxis 9,TACC4
R730 T1139 T1138 punct ],9
R731 T1140 T1135 cc and,TACC4
R732 T1141 T1142 amod human,RHAMM
R733 T1142 T1135 conj RHAMM,TACC4
R734 T1143 T1144 punct [,10
R735 T1144 T1142 parataxis 10,RHAMM
R736 T1145 T1144 punct ],10
R737 T1146 T1125 aux have,proposed
R738 T1147 T1125 auxpass been,proposed
R739 T1149 T1148 punct ", ",is
R740 T1150 T1151 poss their,identity
R741 T1151 T1148 nsubj identity,is
R742 T1152 T1151 amod true,identity
R743 T1153 T1151 cc and,identity
R744 T1154 T1151 conj placement,identity
R745 T1155 T1151 prep in,identity
R746 T1156 T1157 det the,evolution
R747 T1157 T1155 pobj evolution,in
R748 T1158 T1157 prep of,evolution
R749 T1159 T1160 det the,family
R750 T1160 T1158 pobj family,of
R751 T1161 T1160 compound TACC,family
R752 T1162 T1148 prep under,is
R753 T1163 T1162 pobj debate,under
R754 T1164 T1148 punct .,is
R755 T1166 T1167 advmod Thus,resolve
R756 T1168 T1167 punct ", ",resolve
R757 T1169 T1170 det the,identification
R758 T1170 T1167 nsubj identification,resolve
R759 T1171 T1170 cc and,identification
R760 T1172 T1173 amod functional,characterization
R761 T1173 T1170 conj characterization,identification
R762 T1174 T1170 prep of,identification
R763 T1175 T1176 amod new,members
R764 T1176 T1174 pobj members,of
R765 T1177 T1176 prep of,members
R766 T1178 T1179 det the,family
R767 T1179 T1177 pobj family,of
R768 T1180 T1179 compound TACC,family
R769 T1181 T1170 prep in,identification
R770 T1182 T1183 amod other,organisms
R771 T1183 T1181 pobj organisms,in
R772 T1184 T1170 punct ", ",identification
R773 T1185 T1186 advmod alternatively,spliced
R774 T1186 T1187 amod spliced,isoforms
R775 T1187 T1170 conj isoforms,identification
R776 T1188 T1187 prep of,isoforms
R777 T1189 T1190 det each,TACC
R778 T1190 T1188 pobj TACC,of
R779 T1191 T1187 cc and,isoforms
R780 T1192 T1187 conj comparison,isoforms
R781 T1193 T1192 prep of,comparison
R782 T1194 T1195 det the,relationship
R783 T1195 T1193 pobj relationship,of
R784 T1196 T1195 amod phylogenetic,relationship
R785 T1197 T1195 prep of,relationship
R786 T1198 T1199 det these,genes
R787 T1199 T1197 pobj genes,of
R788 T1200 T1195 amod relative,relationship
R789 T1201 T1200 prep to,relative
R790 T1202 T1203 amod other,members
R791 T1203 T1201 pobj members,to
R792 T1204 T1203 prep of,members
R793 T1205 T1206 det the,superfamily
R794 T1206 T1204 pobj superfamily,of
R795 T1207 T1208 amod coiled,coil
R796 T1208 T1206 compound coil,superfamily
R797 T1209 T1167 aux will,resolve
R798 T1210 T1211 det this,issue
R799 T1211 T1167 dobj issue,resolve
R800 T1212 T1167 cc and,resolve
R801 T1213 T1167 conj provide,resolve
R802 T1214 T1213 dobj clues,provide
R803 T1215 T1214 prep to,clues
R804 T1216 T1217 det the,evolution
R805 T1217 T1215 pobj evolution,to
R806 T1218 T1217 prep of,evolution
R807 T1219 T1220 compound TACC,function
R808 T1220 T1218 pobj function,of
R809 T1221 T1167 punct .,resolve
R487 T884 T890 nsubjpass gene,identified
R655 T1061 T1059 pcomp associated,of

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T649 23-29 CHEBI_EXT:37527 denotes acidic
T650 30-41 SO_EXT:0001080 denotes coiled coil
T651 42-46 SO_EXT:0000704 denotes gene
T652 48-53 PR_EXT:000016006 denotes TACC1
T653 99-109 GO:0010467 denotes expression
T654 99-113 SO_EXT:0001428 denotes expression map
T656 136-142,149-159 SO_EXT:0000105 denotes arm of chromosome
T657 143-148 NCBITaxon:9606 denotes human
T658 149-159 GO_SO_EXT:chromosome denotes chromosome
T660 245-255,268-275 SO_EXT:0000854 denotes paralogous regions
T661 256-275 GO_SO_EXT:chromosomal_part_or_position_or_region_or_site denotes chromosomal regions
T663 268-278,285-296 GO_SO_EXT:chromosomal_part_or_position_or_region_or_site denotes regions on chromosomes
T664 279-284 NCBITaxon:9606 denotes human
T665 285-296 GO_SO_EXT:chromosome denotes chromosomes
T666 348-352 GO_PR_EXT:fibroblast_growth_factor_receptor denotes FGFR
T667 353-357 SO_EXT:0000704 denotes gene
T668 437-441 SO_EXT:0000704 denotes gene
T669 449-460 NCBITaxon:33317 denotes protostomes
T670 461-482 NCBITaxon:6239 denotes Caenorhabitis elegans
T671 488-511 NCBITaxon:7227 denotes Drosophila melanogaster
T672 561-565 GO_PR_EXT:fibroblast_growth_factor_receptor denotes FGFR
T673 575-580 SO_EXT:0000704 denotes genes
T674 656-667 NCBITaxon:7742 denotes vertebrates
T675 691-703 SO_EXT:sequence_duplication_entity_or_process denotes duplications
T676 721-725 SO_EXT:0000704 denotes gene
T677 796-800 GO_PR_EXT:fibroblast_growth_factor_receptor denotes FGFR
T678 801-806 SO_EXT:0000704 denotes genes
T679 810-816 NCBITaxon:9606 denotes humans
T680 873-883 NCBITaxon:7742 denotes vertebrate
T681 884-890 SO_EXT:0001026 denotes genome
T682 927-931 GO_PR_EXT:fibroblast_growth_factor_receptor denotes FGFR
T683 949-960 NCBITaxon:7742 denotes vertebrates
T684 1008-1012 SO_EXT:0000704 denotes gene
T685 1032-1037 PR_EXT:000001451 denotes FGFR4
T686 1041-1051 NCBITaxon:7742 denotes vertebrate
T687 1052-1059 SO_EXT:0001026 denotes genomes
T688 1093-1098 SO_EXT:0000704 denotes genes
T689 1109-1115 SO_EXT:sequence_cloning_process denotes cloned
T690 1119-1125 NCBITaxon:9606 denotes humans
T691 1148-1153 NCBITaxon:10088 denotes mouse
T692 1159-1173 NCBITaxon:8355 denotes Xenopus laevis
T693 1179-1194 NCBITaxon:7227 denotes D. melanogaster
T694 1204-1214 NCBITaxon:6239 denotes C. elegans
T695 1281-1302 NCBITaxon:9986 denotes Oryctolagus cuniculus
T696 1317-1322 NCBITaxon:9606 denotes human
T697 1323-1328 PR_EXT:000001856 denotes RHAMM
T698 1541-1550 NCBITaxon:1 denotes organisms
T699 1552-1573 GO:0000380 denotes alternatively spliced
T700 1552-1582 SO_EXT:alternative_splice_variant denotes alternatively spliced isoforms
T701 1653-1658 SO_EXT:0000704 denotes genes
T702 1692-1703 SO_EXT:0001080 denotes coiled coil

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T583 23-29 CHEBI:37527 denotes acidic
T584 30-41 SO:0001080 denotes coiled coil
T585 42-46 SO:0000704 denotes gene
T586 48-53 PR:000016006 denotes TACC1
T587 99-109 GO:0010467 denotes expression
T588 99-113 SO:0001428 denotes expression map
T590 136-142,149-159 SO:0000105 denotes arm of chromosome
T591 143-148 NCBITaxon:9606 denotes human
T593 245-255,268-275 SO:0000854 denotes paralogous regions
T594 279-284 NCBITaxon:9606 denotes human
T595 353-357 SO:0000704 denotes gene
T596 437-441 SO:0000704 denotes gene
T597 449-460 NCBITaxon:33317 denotes protostomes
T598 461-482 NCBITaxon:6239 denotes Caenorhabitis elegans
T599 488-511 NCBITaxon:7227 denotes Drosophila melanogaster
T600 575-580 SO:0000704 denotes genes
T601 656-667 NCBITaxon:7742 denotes vertebrates
T602 721-725 SO:0000704 denotes gene
T603 801-806 SO:0000704 denotes genes
T604 810-816 NCBITaxon:9606 denotes humans
T605 873-883 NCBITaxon:7742 denotes vertebrate
T606 884-890 SO:0001026 denotes genome
T607 949-960 NCBITaxon:7742 denotes vertebrates
T608 1008-1012 SO:0000704 denotes gene
T609 1032-1037 PR:000001451 denotes FGFR4
T610 1041-1051 NCBITaxon:7742 denotes vertebrate
T611 1052-1059 SO:0001026 denotes genomes
T612 1093-1098 SO:0000704 denotes genes
T613 1119-1125 NCBITaxon:9606 denotes humans
T614 1148-1153 NCBITaxon:10088 denotes mouse
T615 1159-1173 NCBITaxon:8355 denotes Xenopus laevis
T616 1179-1194 NCBITaxon:7227 denotes D. melanogaster
T617 1204-1214 NCBITaxon:6239 denotes C. elegans
T618 1281-1302 NCBITaxon:9986 denotes Oryctolagus cuniculus
T619 1317-1322 NCBITaxon:9606 denotes human
T620 1323-1328 PR:000001856 denotes RHAMM
T621 1541-1550 NCBITaxon:1 denotes organisms
T622 1552-1573 GO:0000380 denotes alternatively spliced
T623 1653-1658 SO:0000704 denotes genes
T624 1692-1703 SO:0001080 denotes coiled coil

2_test

Id Subject Object Predicate Lexical cue
15207008-10435627-9665981 163-164 10435627 denotes 1
15207008-10435627-9665982 366-367 10435627 denotes 1
15207008-10366448-9665982 366-367 10366448 denotes 1
15207008-12620397-9665982 366-367 12620397 denotes 1
15207008-10637228-9665983 513-514 10637228 denotes 4
15207008-12956952-9665983 513-514 12956952 denotes 4
15207008-12956951-9665983 513-514 12956951 denotes 4
15207008-10435627-9665984 1127-1128 10435627 denotes 1
15207008-10366448-9665984 1127-1128 10366448 denotes 1
15207008-12620397-9665984 1127-1128 12620397 denotes 1
15207008-11025203-9665985 1155-1156 11025203 denotes 7
15207008-10635326-9665986 1175-1176 10635326 denotes 8
15207008-10637228-9665987 1196-1197 10637228 denotes 4
15207008-12956952-9665988 1216-1217 12956952 denotes 5
15207008-12956951-9665989 1218-1219 12956951 denotes 6
15207008-12015314-9665990 1310-1311 12015314 denotes 9
15207008-12808028-9665991 1330-1332 12808028 denotes 10