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Id Subject Object Predicate Lexical cue
T5507 0-11 JJ denotes Comparative
T5508 20-29 NN denotes structure
T5509 12-19 JJ denotes genomic
T5510 30-32 IN denotes of
T5511 33-36 DT denotes the
T5512 42-48 NN denotes family
T5513 37-41 NN denotes TACC
T5514 48-304 sentence denotes The genomic DNA sequences corresponding to the orthologous TACC genes of human, mouse, rat, pufferfish, C. intestinalis, D. melanogaster and C. elegans were extracted and analyzed by Genescan and BLAST to determine the genomic structure of each TACC gene.
T5515 49-52 DT denotes The
T5516 65-74 NNS denotes sequences
T5517 53-60 JJ denotes genomic
T5518 61-64 NN denotes DNA
T5519 206-215 VBN denotes extracted
T5520 75-88 VBG denotes corresponding
T5521 89-91 IN denotes to
T5522 92-95 DT denotes the
T5523 113-118 NNS denotes genes
T5524 96-107 JJ denotes orthologous
T5525 108-112 NN denotes TACC
T5526 119-121 IN denotes of
T5527 122-127 JJ denotes human
T5528 127-129 , denotes ,
T5529 129-134 NN denotes mouse
T5530 134-136 , denotes ,
T5531 136-139 NN denotes rat
T5532 139-141 , denotes ,
T5533 141-151 NN denotes pufferfish
T5534 151-153 , denotes ,
T5535 153-155 NNP denotes C.
T5536 156-168 NNP denotes intestinalis
T5537 168-170 , denotes ,
T5538 170-172 NNP denotes D.
T5539 173-185 NNP denotes melanogaster
T5540 186-189 CC denotes and
T5541 190-192 NNP denotes C.
T5542 193-200 NNP denotes elegans
T5543 201-205 VBD denotes were
T5544 216-219 CC denotes and
T5545 220-228 VBN denotes analyzed
T5546 229-231 IN denotes by
T5547 232-240 NNP denotes Genescan
T5548 241-244 CC denotes and
T5549 245-250 NNP denotes BLAST
T5550 251-253 TO denotes to
T5551 254-263 VB denotes determine
T5552 264-267 DT denotes the
T5553 276-285 NN denotes structure
T5554 268-275 JJ denotes genomic
T5555 286-288 IN denotes of
T5556 289-293 DT denotes each
T5557 299-303 NN denotes gene
T5558 294-298 NN denotes TACC
T5559 303-304 . denotes .
T5560 304-471 sentence denotes In some cases, for rat and pufferfish, exons were added or modified based on the best similarity of translated peptides to the corresponding mouse and human proteins.
T5561 305-307 IN denotes In
T5562 355-360 VBN denotes added
T5563 308-312 DT denotes some
T5564 313-318 NNS denotes cases
T5565 318-320 , denotes ,
T5566 320-323 IN denotes for
T5567 324-327 NN denotes rat
T5568 328-331 CC denotes and
T5569 332-342 NN denotes pufferfish
T5570 342-344 , denotes ,
T5571 344-349 NNS denotes exons
T5572 350-354 VBD denotes were
T5573 361-363 CC denotes or
T5574 364-372 VBN denotes modified
T5575 373-378 VBN denotes based
T5576 379-381 IN denotes on
T5577 382-385 DT denotes the
T5578 391-401 NN denotes similarity
T5579 386-390 JJS denotes best
T5580 402-404 IN denotes of
T5581 405-415 VBN denotes translated
T5582 416-424 NNS denotes peptides
T5583 425-427 IN denotes to
T5584 428-431 DT denotes the
T5585 462-470 NN denotes proteins
T5586 432-445 VBG denotes corresponding
T5587 446-451 NN denotes mouse
T5588 452-455 CC denotes and
T5589 456-461 JJ denotes human
T5590 470-471 . denotes .
T5591 471-664 sentence denotes For regions with low sequence similarity in T. rubripes, genomic sequences from the fresh water pufferfish, Tetraodon nigroviridis were used as additional means to verify the predicted exons.
T5592 472-475 IN denotes For
T5593 609-613 VBN denotes used
T5594 476-483 NNS denotes regions
T5595 484-488 IN denotes with
T5596 489-492 JJ denotes low
T5597 502-512 NN denotes similarity
T5598 493-501 NN denotes sequence
T5599 513-515 IN denotes in
T5600 516-518 NNP denotes T.
T5601 519-527 NNP denotes rubripes
T5602 527-529 , denotes ,
T5603 529-536 JJ denotes genomic
T5604 537-546 NNS denotes sequences
T5605 548-552 IN denotes from
T5606 553-556 DT denotes the
T5607 569-579 NN denotes pufferfish
T5608 557-562 JJ denotes fresh
T5609 563-568 NN denotes water
T5610 579-581 , denotes ,
T5611 581-590 NNP denotes Tetraodon
T5612 591-603 NNP denotes nigroviridis
T5613 604-608 VBD denotes were
T5614 614-616 IN denotes as
T5615 617-627 JJ denotes additional
T5616 628-633 NNS denotes means
T5617 634-636 TO denotes to
T5618 637-643 VB denotes verify
T5619 644-647 DT denotes the
T5620 658-663 NNS denotes exons
T5621 648-657 VBN denotes predicted
T5622 663-664 . denotes .
T5623 664-740 sentence denotes The general structure of the TACC genes and proteins is depicted in Fig. 4.
T5624 665-668 DT denotes The
T5625 677-686 NN denotes structure
T5626 669-676 JJ denotes general
T5627 721-729 VBN denotes depicted
T5628 687-689 IN denotes of
T5629 690-693 DT denotes the
T5630 699-704 NNS denotes genes
T5631 694-698 NN denotes TACC
T5632 705-708 CC denotes and
T5633 709-717 NN denotes proteins
T5634 718-720 VBZ denotes is
T5635 730-732 IN denotes in
T5636 733-737 NN denotes Fig.
T5637 738-739 CD denotes 4
T5638 739-740 . denotes .
T5639 740-855 sentence denotes The main conserved feature of the TACC family, the TACC domain, is located at the carboxy terminus of the protein.
T5640 741-744 DT denotes The
T5641 760-767 NN denotes feature
T5642 745-749 JJ denotes main
T5643 750-759 VBN denotes conserved
T5644 808-815 VBN denotes located
T5645 768-770 IN denotes of
T5646 771-774 DT denotes the
T5647 780-786 NN denotes family
T5648 775-779 NN denotes TACC
T5649 786-788 , denotes ,
T5650 788-791 DT denotes the
T5651 797-803 NN denotes domain
T5652 792-796 NN denotes TACC
T5653 803-805 , denotes ,
T5654 805-807 VBZ denotes is
T5655 816-818 IN denotes at
T5656 819-822 DT denotes the
T5657 831-839 NN denotes terminus
T5658 823-830 NN denotes carboxy
T5659 840-842 IN denotes of
T5660 843-846 DT denotes the
T5661 847-854 NN denotes protein
T5662 854-855 . denotes .
T5663 855-1005 sentence denotes In the case of the C. elegans TAC protein, this structure comprises the majority of the protein and is encoded by two of the three exons of the gene.
T5664 856-858 IN denotes In
T5665 914-923 VBZ denotes comprises
T5666 859-862 DT denotes the
T5667 863-867 NN denotes case
T5668 868-870 IN denotes of
T5669 871-874 DT denotes the
T5670 890-897 NN denotes protein
T5671 875-877 NNP denotes C.
T5672 878-885 NNP denotes elegans
T5673 886-889 NN denotes TAC
T5674 897-899 , denotes ,
T5675 899-903 DT denotes this
T5676 904-913 NN denotes structure
T5677 924-927 DT denotes the
T5678 928-936 NN denotes majority
T5679 937-939 IN denotes of
T5680 940-943 DT denotes the
T5681 944-951 NN denotes protein
T5682 952-955 CC denotes and
T5683 956-958 VBZ denotes is
T5684 959-966 VBN denotes encoded
T5685 967-969 IN denotes by
T5686 970-973 CD denotes two
T5687 974-976 IN denotes of
T5688 977-980 DT denotes the
T5689 987-992 NNS denotes exons
T5690 981-986 CD denotes three
T5691 993-995 IN denotes of
T5692 996-999 DT denotes the
T5693 1000-1004 NN denotes gene
T5694 1004-1005 . denotes .
T5695 1005-1215 sentence denotes In the higher organisms, D. melanogaster, and the deuterostomes C. intestinalis to human, this feature is also encoded by the final exons of the gene (five in D. melanogaster, seven in the deuterostome genes).
T5696 1006-1008 IN denotes In
T5697 1117-1124 VBN denotes encoded
T5698 1009-1012 DT denotes the
T5699 1020-1029 NNS denotes organisms
T5700 1013-1019 JJR denotes higher
T5701 1029-1031 , denotes ,
T5702 1031-1033 NNP denotes D.
T5703 1034-1046 NNP denotes melanogaster
T5704 1046-1048 , denotes ,
T5705 1048-1051 CC denotes and
T5706 1052-1055 DT denotes the
T5707 1073-1085 NNP denotes intestinalis
T5708 1056-1069 NNS denotes deuterostomes
T5709 1070-1072 NNP denotes C.
T5710 1086-1088 IN denotes to
T5711 1089-1094 JJ denotes human
T5712 1094-1096 , denotes ,
T5713 1096-1100 DT denotes this
T5714 1101-1108 NN denotes feature
T5715 1109-1111 VBZ denotes is
T5716 1112-1116 RB denotes also
T5717 1125-1127 IN denotes by
T5718 1128-1131 DT denotes the
T5719 1138-1143 NNS denotes exons
T5720 1132-1137 JJ denotes final
T5721 1144-1146 IN denotes of
T5722 1147-1150 DT denotes the
T5723 1151-1155 NN denotes gene
T5724 1156-1157 -LRB- denotes (
T5725 1157-1161 CD denotes five
T5726 1162-1164 IN denotes in
T5727 1165-1167 NNP denotes D.
T5728 1168-1180 NNP denotes melanogaster
T5729 1180-1182 , denotes ,
T5730 1182-1187 CD denotes seven
T5731 1188-1190 IN denotes in
T5732 1191-1194 DT denotes the
T5733 1208-1213 NNS denotes genes
T5734 1195-1207 NN denotes deuterostome
T5735 1213-1214 -RRB- denotes )
T5736 1214-1215 . denotes .
T5737 1215-1305 sentence denotes Outside of the TACC domain, however, TACC family members show relatively little homology.
T5738 1216-1223 IN denotes Outside
T5739 1273-1277 VBP denotes show
T5740 1224-1226 IN denotes of
T5741 1227-1230 DT denotes the
T5742 1236-1242 NN denotes domain
T5743 1231-1235 NN denotes TACC
T5744 1242-1244 , denotes ,
T5745 1244-1251 RB denotes however
T5746 1251-1253 , denotes ,
T5747 1253-1257 NN denotes TACC
T5748 1265-1272 NNS denotes members
T5749 1258-1264 NN denotes family
T5750 1278-1288 RB denotes relatively
T5751 1289-1295 JJ denotes little
T5752 1296-1304 NN denotes homology
T5753 1304-1305 . denotes .
T5754 1305-1523 sentence denotes It is interesting that each TACC gene contains one large exon, which shows considerable variability between TACC orthologues, and constitutes the main difference between the TACC3 genes in the vertebrates (see below).
T5755 1306-1308 PRP denotes It
T5756 1309-1311 VBZ denotes is
T5757 1312-1323 JJ denotes interesting
T5758 1324-1328 IN denotes that
T5759 1344-1352 VBZ denotes contains
T5760 1329-1333 DT denotes each
T5761 1339-1343 NN denotes gene
T5762 1334-1338 NN denotes TACC
T5763 1353-1356 CD denotes one
T5764 1363-1367 NN denotes exon
T5765 1357-1362 JJ denotes large
T5766 1367-1369 , denotes ,
T5767 1369-1374 WDT denotes which
T5768 1375-1380 VBZ denotes shows
T5769 1381-1393 JJ denotes considerable
T5770 1394-1405 NN denotes variability
T5771 1406-1413 IN denotes between
T5772 1414-1418 NN denotes TACC
T5773 1419-1430 NNS denotes orthologues
T5774 1430-1432 , denotes ,
T5775 1432-1435 CC denotes and
T5776 1436-1447 VBZ denotes constitutes
T5777 1448-1451 DT denotes the
T5778 1457-1467 NN denotes difference
T5779 1452-1456 JJ denotes main
T5780 1468-1475 IN denotes between
T5781 1476-1479 DT denotes the
T5782 1486-1491 NNS denotes genes
T5783 1480-1485 NN denotes TACC3
T5784 1492-1494 IN denotes in
T5785 1495-1498 DT denotes the
T5786 1499-1510 NNS denotes vertebrates
T5787 1511-1512 -LRB- denotes (
T5788 1512-1515 VB denotes see
T5789 1516-1521 RB denotes below
T5790 1521-1522 -RRB- denotes )
T5791 1522-1523 . denotes .
T5792 1523-1761 sentence denotes In deuterostomes, this exon contains the SDP repeat (or in the case of the murine TACC3's, a rodent-specific 24 amino acid repeat), which is responsible for the binding of the SWI/SNF chromatin remodeling complex component GAS41 [15,16].
T5793 1524-1526 IN denotes In
T5794 1552-1560 VBZ denotes contains
T5795 1527-1540 NNS denotes deuterostomes
T5796 1540-1542 , denotes ,
T5797 1542-1546 DT denotes this
T5798 1547-1551 NN denotes exon
T5799 1561-1564 DT denotes the
T5800 1569-1575 NN denotes repeat
T5801 1565-1568 NN denotes SDP
T5802 1576-1577 -LRB- denotes (
T5803 1577-1579 CC denotes or
T5804 1580-1582 IN denotes in
T5805 1647-1653 NN denotes repeat
T5806 1583-1586 DT denotes the
T5807 1587-1591 NN denotes case
T5808 1592-1594 IN denotes of
T5809 1595-1598 DT denotes the
T5810 1606-1611 NN denotes TACC3
T5811 1599-1605 JJ denotes murine
T5812 1611-1613 POS denotes 's
T5813 1613-1615 , denotes ,
T5814 1615-1616 DT denotes a
T5815 1617-1623 NN denotes rodent
T5816 1624-1632 JJ denotes specific
T5817 1623-1624 HYPH denotes -
T5818 1633-1635 CD denotes 24
T5819 1642-1646 NN denotes acid
T5820 1636-1641 NN denotes amino
T5821 1653-1654 -RRB- denotes )
T5822 1654-1656 , denotes ,
T5823 1656-1661 WDT denotes which
T5824 1662-1664 VBZ denotes is
T5825 1665-1676 JJ denotes responsible
T5826 1677-1680 IN denotes for
T5827 1681-1684 DT denotes the
T5828 1685-1692 NN denotes binding
T5829 1693-1695 IN denotes of
T5830 1696-1699 DT denotes the
T5831 1737-1746 NN denotes component
T5832 1700-1703 NN denotes SWI
T5833 1704-1707 NN denotes SNF
T5834 1703-1704 HYPH denotes /
T5835 1708-1717 NN denotes chromatin
T5836 1718-1728 NN denotes remodeling
T5837 1729-1736 JJ denotes complex
T5838 1747-1752 NN denotes GAS41
T5839 1753-1754 -LRB- denotes [
T5840 1757-1759 CD denotes 16
T5841 1754-1756 CD denotes 15
T5842 1756-1757 , denotes ,
T5843 1759-1760 -RRB- denotes ]
T5844 1760-1761 . denotes .
T5845 1761-1979 sentence denotes Of the vertebrate TACC proteins, the TACC3 orthologues show the greatest variability in size and sequence, ranging in size from 599 amino acids for the rat TACC3 protein, to 942 amino acids in the Danio rerio protein.
T5846 1762-1764 IN denotes Of
T5847 1817-1821 VBP denotes show
T5848 1765-1768 DT denotes the
T5849 1785-1793 NN denotes proteins
T5850 1769-1779 NN denotes vertebrate
T5851 1780-1784 NN denotes TACC
T5852 1793-1795 , denotes ,
T5853 1795-1798 DT denotes the
T5854 1805-1816 NNS denotes orthologues
T5855 1799-1804 NN denotes TACC3
T5856 1822-1825 DT denotes the
T5857 1835-1846 NN denotes variability
T5858 1826-1834 JJS denotes greatest
T5859 1847-1849 IN denotes in
T5860 1850-1854 NN denotes size
T5861 1855-1858 CC denotes and
T5862 1859-1867 NN denotes sequence
T5863 1867-1869 , denotes ,
T5864 1869-1876 VBG denotes ranging
T5865 1877-1879 IN denotes in
T5866 1880-1884 NN denotes size
T5867 1885-1889 IN denotes from
T5868 1890-1893 CD denotes 599
T5869 1900-1905 NNS denotes acids
T5870 1894-1899 NN denotes amino
T5871 1906-1909 IN denotes for
T5872 1910-1913 DT denotes the
T5873 1924-1931 NN denotes protein
T5874 1914-1917 NN denotes rat
T5875 1918-1923 NN denotes TACC3
T5876 1931-1933 , denotes ,
T5877 1933-1935 IN denotes to
T5878 1936-1939 CD denotes 942
T5879 1946-1951 NNS denotes acids
T5880 1940-1945 NN denotes amino
T5881 1952-1954 IN denotes in
T5882 1955-1958 DT denotes the
T5883 1971-1978 NN denotes protein
T5884 1959-1964 NNP denotes Danio
T5885 1965-1970 NNP denotes rerio
T5886 1978-1979 . denotes .
T5887 1979-2079 sentence denotes The reasons for these differences are apparent from the genomic structure of the TACC3 orthologues.
T5888 1980-1983 DT denotes The
T5889 1984-1991 NNS denotes reasons
T5890 2014-2017 VBP denotes are
T5891 1992-1995 IN denotes for
T5892 1996-2001 DT denotes these
T5893 2002-2013 NNS denotes differences
T5894 2018-2026 JJ denotes apparent
T5895 2027-2031 IN denotes from
T5896 2032-2035 DT denotes the
T5897 2044-2053 NN denotes structure
T5898 2036-2043 JJ denotes genomic
T5899 2054-2056 IN denotes of
T5900 2057-2060 DT denotes the
T5901 2067-2078 NNS denotes orthologues
T5902 2061-2066 NN denotes TACC3
T5903 2078-2079 . denotes .
T5904 2079-2338 sentence denotes TACC3 can be divided into three sections: a conserved N-terminal region (CNTR) of 108 amino acids, encoded by exons 2 and 3 in each vertebrate TACC3 gene, the conserved TACC domain distributed over the final seven exons, and a highly variable central region.
T5905 2080-2085 NN denotes TACC3
T5906 2093-2100 VBN denotes divided
T5907 2086-2089 MD denotes can
T5908 2090-2092 VB denotes be
T5909 2101-2105 IN denotes into
T5910 2106-2111 CD denotes three
T5911 2112-2120 NNS denotes sections
T5912 2120-2122 : denotes :
T5913 2122-2123 DT denotes a
T5914 2145-2151 NN denotes region
T5915 2124-2133 VBN denotes conserved
T5916 2134-2135 NN denotes N
T5917 2136-2144 JJ denotes terminal
T5918 2135-2136 HYPH denotes -
T5919 2152-2153 -LRB- denotes (
T5920 2153-2157 NN denotes CNTR
T5921 2157-2158 -RRB- denotes )
T5922 2159-2161 IN denotes of
T5923 2162-2165 CD denotes 108
T5924 2172-2177 NNS denotes acids
T5925 2166-2171 NN denotes amino
T5926 2177-2179 , denotes ,
T5927 2179-2186 VBN denotes encoded
T5928 2187-2189 IN denotes by
T5929 2190-2195 NNS denotes exons
T5930 2196-2197 CD denotes 2
T5931 2198-2201 CC denotes and
T5932 2202-2203 CD denotes 3
T5933 2204-2206 IN denotes in
T5934 2207-2211 DT denotes each
T5935 2229-2233 NN denotes gene
T5936 2212-2222 NN denotes vertebrate
T5937 2223-2228 NN denotes TACC3
T5938 2233-2235 , denotes ,
T5939 2235-2238 DT denotes the
T5940 2254-2260 NN denotes domain
T5941 2239-2248 VBN denotes conserved
T5942 2249-2253 NN denotes TACC
T5943 2261-2272 VBN denotes distributed
T5944 2273-2277 IN denotes over
T5945 2278-2281 DT denotes the
T5946 2294-2299 NNS denotes exons
T5947 2282-2287 JJ denotes final
T5948 2288-2293 CD denotes seven
T5949 2299-2301 , denotes ,
T5950 2301-2304 CC denotes and
T5951 2305-2306 DT denotes a
T5952 2331-2337 NN denotes region
T5953 2307-2313 RB denotes highly
T5954 2314-2322 JJ denotes variable
T5955 2323-2330 JJ denotes central
T5956 2337-2338 . denotes .
T5957 2338-2553 sentence denotes The lack of conservation in both size and sequence of the central portion of the TACC3 proteins of human and mouse has been previously noted, and accounts for the major difference between these two orthologues [2].
T5958 2339-2342 DT denotes The
T5959 2343-2347 NN denotes lack
T5960 2474-2479 VBN denotes noted
T5961 2348-2350 IN denotes of
T5962 2351-2363 NN denotes conservation
T5963 2364-2366 IN denotes in
T5964 2367-2371 CC denotes both
T5965 2372-2376 NN denotes size
T5966 2377-2380 CC denotes and
T5967 2381-2389 NN denotes sequence
T5968 2390-2392 IN denotes of
T5969 2393-2396 DT denotes the
T5970 2405-2412 NN denotes portion
T5971 2397-2404 JJ denotes central
T5972 2413-2415 IN denotes of
T5973 2416-2419 DT denotes the
T5974 2426-2434 NN denotes proteins
T5975 2420-2425 NN denotes TACC3
T5976 2435-2437 IN denotes of
T5977 2438-2443 JJ denotes human
T5978 2448-2453 NN denotes mouse
T5979 2444-2447 CC denotes and
T5980 2454-2457 VBZ denotes has
T5981 2458-2462 VBN denotes been
T5982 2463-2473 RB denotes previously
T5983 2479-2481 , denotes ,
T5984 2481-2484 CC denotes and
T5985 2485-2493 VBZ denotes accounts
T5986 2494-2497 IN denotes for
T5987 2498-2501 DT denotes the
T5988 2508-2518 NN denotes difference
T5989 2502-2507 JJ denotes major
T5990 2519-2526 IN denotes between
T5991 2527-2532 DT denotes these
T5992 2537-2548 NNS denotes orthologues
T5993 2533-2536 CD denotes two
T5994 2549-2550 -LRB- denotes [
T5995 2550-2551 CD denotes 2
T5996 2551-2552 -RRB- denotes ]
T5997 2552-2553 . denotes .
T5998 2553-2700 sentence denotes The majority of this central portion, which contains the SDP repeat motifs, is encoded by one exon in human and the pufferfish (emb|CAAB01001184).
T5999 2554-2557 DT denotes The
T6000 2558-2566 NN denotes majority
T6001 2633-2640 VBN denotes encoded
T6002 2567-2569 IN denotes of
T6003 2570-2574 DT denotes this
T6004 2583-2590 NN denotes portion
T6005 2575-2582 JJ denotes central
T6006 2590-2592 , denotes ,
T6007 2592-2597 WDT denotes which
T6008 2598-2606 VBZ denotes contains
T6009 2607-2610 DT denotes the
T6010 2622-2628 NNS denotes motifs
T6011 2611-2614 NN denotes SDP
T6012 2615-2621 NN denotes repeat
T6013 2628-2630 , denotes ,
T6014 2630-2632 VBZ denotes is
T6015 2641-2643 IN denotes by
T6016 2644-2647 CD denotes one
T6017 2648-2652 NN denotes exon
T6018 2653-2655 IN denotes in
T6019 2656-2661 JJ denotes human
T6020 2662-2665 CC denotes and
T6021 2666-2669 DT denotes the
T6022 2670-2680 NN denotes pufferfish
T6023 2681-2682 -LRB- denotes (
T6024 2682-2698 NN denotes emb|CAAB01001184
T6025 2698-2699 -RRB- denotes )
T6026 2699-2700 . denotes .
T6027 2700-2862 sentence denotes In rodents, however, this region is almost entirely composed of seven 24 amino acid repeats, which are located in a single exon of the mouse and rat TACC3 genes.
T6028 2701-2703 IN denotes In
T6029 2753-2761 VBN denotes composed
T6030 2704-2711 NNS denotes rodents
T6031 2711-2713 , denotes ,
T6032 2713-2720 RB denotes however
T6033 2720-2722 , denotes ,
T6034 2722-2726 DT denotes this
T6035 2727-2733 NN denotes region
T6036 2734-2736 VBZ denotes is
T6037 2737-2743 RB denotes almost
T6038 2744-2752 RB denotes entirely
T6039 2762-2764 IN denotes of
T6040 2765-2770 CD denotes seven
T6041 2785-2792 NNS denotes repeats
T6042 2771-2773 CD denotes 24
T6043 2780-2784 NN denotes acid
T6044 2774-2779 NN denotes amino
T6045 2792-2794 , denotes ,
T6046 2794-2799 WDT denotes which
T6047 2804-2811 VBN denotes located
T6048 2800-2803 VBP denotes are
T6049 2812-2814 IN denotes in
T6050 2815-2816 DT denotes a
T6051 2824-2828 NN denotes exon
T6052 2817-2823 JJ denotes single
T6053 2829-2831 IN denotes of
T6054 2832-2835 DT denotes the
T6055 2856-2861 NNS denotes genes
T6056 2836-2841 NN denotes mouse
T6057 2842-2845 CC denotes and
T6058 2846-2849 NN denotes rat
T6059 2850-2855 NN denotes TACC3
T6060 2861-2862 . denotes .
T6061 2862-2995 sentence denotes It has been previously reported that there are four mouse TACC3 splice variants that differ in the number of these repeats [2,7,17].
T6062 2863-2865 PRP denotes It
T6063 2886-2894 VBN denotes reported
T6064 2866-2869 VBZ denotes has
T6065 2870-2874 VBN denotes been
T6066 2875-2885 RB denotes previously
T6067 2895-2899 IN denotes that
T6068 2906-2909 VBP denotes are
T6069 2900-2905 EX denotes there
T6070 2910-2914 CD denotes four
T6071 2934-2942 NNS denotes variants
T6072 2915-2920 NN denotes mouse
T6073 2921-2926 NN denotes TACC3
T6074 2927-2933 NN denotes splice
T6075 2943-2947 WDT denotes that
T6076 2948-2954 VBP denotes differ
T6077 2955-2957 IN denotes in
T6078 2958-2961 DT denotes the
T6079 2962-2968 NN denotes number
T6080 2969-2971 IN denotes of
T6081 2972-2977 DT denotes these
T6082 2978-2985 NNS denotes repeats
T6083 2986-2987 -LRB- denotes [
T6084 2991-2993 CD denotes 17
T6085 2987-2988 CD denotes 2
T6086 2988-2989 , denotes ,
T6087 2989-2990 CD denotes 7
T6088 2990-2991 , denotes ,
T6089 2993-2994 -RRB- denotes ]
T6090 2994-2995 . denotes .
T6091 2995-3216 sentence denotes As these repeats are present in a single exon, it appears likely that these different sequences may be the result of the DNA polymerases used in the cDNA synthesis and/or PCR reaction stuttering through the repeat motif.
T6092 2996-2998 IN denotes As
T6093 3013-3016 VBP denotes are
T6094 2999-3004 DT denotes these
T6095 3005-3012 NNS denotes repeats
T6096 3046-3053 VBZ denotes appears
T6097 3017-3024 JJ denotes present
T6098 3025-3027 IN denotes in
T6099 3028-3029 DT denotes a
T6100 3037-3041 NN denotes exon
T6101 3030-3036 JJ denotes single
T6102 3041-3043 , denotes ,
T6103 3043-3045 PRP denotes it
T6104 3054-3060 JJ denotes likely
T6105 3061-3065 IN denotes that
T6106 3096-3098 VB denotes be
T6107 3066-3071 DT denotes these
T6108 3082-3091 NNS denotes sequences
T6109 3072-3081 JJ denotes different
T6110 3092-3095 MD denotes may
T6111 3099-3102 DT denotes the
T6112 3103-3109 NN denotes result
T6113 3110-3112 IN denotes of
T6114 3113-3116 DT denotes the
T6115 3121-3132 NNS denotes polymerases
T6116 3117-3120 NN denotes DNA
T6117 3133-3137 VBN denotes used
T6118 3138-3140 IN denotes in
T6119 3141-3144 DT denotes the
T6120 3150-3159 NN denotes synthesis
T6121 3145-3149 NN denotes cDNA
T6122 3160-3163 CC denotes and
T6123 3163-3164 HYPH denotes /
T6124 3164-3166 CC denotes or
T6125 3167-3170 NN denotes PCR
T6126 3171-3179 NN denotes reaction
T6127 3180-3190 VBG denotes stuttering
T6128 3191-3198 IN denotes through
T6129 3199-3202 DT denotes the
T6130 3210-3215 NN denotes motif
T6131 3203-3209 NN denotes repeat
T6132 3215-3216 . denotes .
T6133 3216-3327 sentence denotes The correct sequence, reported by Sadek et al [7], is the one used throughout the entirety of this manuscript.
T6134 3217-3220 DT denotes The
T6135 3229-3237 NN denotes sequence
T6136 3221-3228 JJ denotes correct
T6137 3268-3270 VBZ denotes is
T6138 3237-3239 , denotes ,
T6139 3239-3247 VBN denotes reported
T6140 3248-3250 IN denotes by
T6141 3251-3256 NNP denotes Sadek
T6142 3257-3259 FW denotes et
T6143 3260-3262 FW denotes al
T6144 3263-3264 -LRB- denotes [
T6145 3264-3265 CD denotes 7
T6146 3265-3266 -RRB- denotes ]
T6147 3266-3268 , denotes ,
T6148 3271-3274 DT denotes the
T6149 3275-3278 CD denotes one
T6150 3279-3283 VBN denotes used
T6151 3284-3294 IN denotes throughout
T6152 3295-3298 DT denotes the
T6153 3299-3307 NN denotes entirety
T6154 3308-3310 IN denotes of
T6155 3311-3315 DT denotes this
T6156 3316-3326 NN denotes manuscript
T6157 3326-3327 . denotes .
T6158 3327-3549 sentence denotes These repeats are not evident in the rabbit protein, or any other TACC protein, and may indicate that the rodent TACC3 has evolved distinct functions, as has already been noted for the amphibian Xenopus TACC3, maskin [8].
T6159 3328-3333 DT denotes These
T6160 3334-3341 NNS denotes repeats
T6161 3342-3345 VBP denotes are
T6162 3346-3349 RB denotes not
T6163 3350-3357 JJ denotes evident
T6164 3358-3360 IN denotes in
T6165 3361-3364 DT denotes the
T6166 3372-3379 NN denotes protein
T6167 3365-3371 NN denotes rabbit
T6168 3379-3381 , denotes ,
T6169 3381-3383 CC denotes or
T6170 3384-3387 DT denotes any
T6171 3399-3406 NN denotes protein
T6172 3388-3393 JJ denotes other
T6173 3394-3398 NN denotes TACC
T6174 3406-3408 , denotes ,
T6175 3408-3411 CC denotes and
T6176 3412-3415 MD denotes may
T6177 3416-3424 VB denotes indicate
T6178 3425-3429 IN denotes that
T6179 3451-3458 VBN denotes evolved
T6180 3430-3433 DT denotes the
T6181 3441-3446 NN denotes TACC3
T6182 3434-3440 NN denotes rodent
T6183 3447-3450 VBZ denotes has
T6184 3459-3467 JJ denotes distinct
T6185 3468-3477 NNS denotes functions
T6186 3477-3479 , denotes ,
T6187 3479-3481 IN denotes as
T6188 3499-3504 VBN denotes noted
T6189 3482-3485 VBZ denotes has
T6190 3486-3493 RB denotes already
T6191 3494-3498 VBN denotes been
T6192 3505-3508 IN denotes for
T6193 3509-3512 DT denotes the
T6194 3531-3536 NN denotes TACC3
T6195 3513-3522 JJ denotes amphibian
T6196 3523-3530 NNP denotes Xenopus
T6197 3536-3538 , denotes ,
T6198 3538-3544 NN denotes maskin
T6199 3545-3546 -LRB- denotes [
T6200 3546-3547 CD denotes 8
T6201 3547-3548 -RRB- denotes ]
T6202 3548-3549 . denotes .
R3405 T5507 T5508 amod Comparative,structure
R3406 T5509 T5508 amod genomic,structure
R3407 T5510 T5508 prep of,structure
R3408 T5511 T5512 det the,family
R3409 T5512 T5510 pobj family,of
R3410 T5513 T5512 compound TACC,family
R3411 T5515 T5516 det The,sequences
R3412 T5516 T5519 nsubj sequences,extracted
R3413 T5517 T5516 amod genomic,sequences
R3414 T5518 T5516 compound DNA,sequences
R3415 T5520 T5516 acl corresponding,sequences
R3416 T5521 T5520 prep to,corresponding
R3417 T5522 T5523 det the,genes
R3418 T5523 T5521 pobj genes,to
R3419 T5524 T5523 amod orthologous,genes
R3420 T5525 T5523 compound TACC,genes
R3421 T5526 T5523 prep of,genes
R3422 T5527 T5526 pobj human,of
R3423 T5528 T5527 punct ", ",human
R3424 T5529 T5527 conj mouse,human
R3425 T5530 T5529 punct ", ",mouse
R3426 T5531 T5529 conj rat,mouse
R3427 T5532 T5531 punct ", ",rat
R3428 T5533 T5531 conj pufferfish,rat
R3429 T5534 T5533 punct ", ",pufferfish
R3430 T5535 T5536 compound C.,intestinalis
R3431 T5536 T5533 conj intestinalis,pufferfish
R3432 T5537 T5536 punct ", ",intestinalis
R3433 T5538 T5539 compound D.,melanogaster
R3434 T5539 T5536 conj melanogaster,intestinalis
R3435 T5540 T5539 cc and,melanogaster
R3436 T5541 T5542 compound C.,elegans
R3437 T5542 T5539 conj elegans,melanogaster
R3438 T5543 T5519 aux were,extracted
R3439 T5544 T5519 cc and,extracted
R3440 T5545 T5519 conj analyzed,extracted
R3441 T5546 T5545 prep by,analyzed
R3442 T5547 T5546 pobj Genescan,by
R3443 T5548 T5547 cc and,Genescan
R3444 T5549 T5547 conj BLAST,Genescan
R3445 T5550 T5551 aux to,determine
R3446 T5551 T5519 advcl determine,extracted
R3447 T5552 T5553 det the,structure
R3448 T5553 T5551 dobj structure,determine
R3449 T5554 T5553 amod genomic,structure
R3450 T5555 T5553 prep of,structure
R3451 T5556 T5557 det each,gene
R3452 T5557 T5555 pobj gene,of
R3453 T5558 T5557 compound TACC,gene
R3454 T5559 T5519 punct .,extracted
R3455 T5561 T5562 prep In,added
R3456 T5563 T5564 det some,cases
R3457 T5564 T5561 pobj cases,In
R3458 T5565 T5562 punct ", ",added
R3459 T5566 T5562 prep for,added
R3460 T5567 T5566 pobj rat,for
R3461 T5568 T5567 cc and,rat
R3462 T5569 T5567 conj pufferfish,rat
R3463 T5570 T5562 punct ", ",added
R3464 T5571 T5562 nsubjpass exons,added
R3465 T5572 T5562 auxpass were,added
R3466 T5573 T5562 cc or,added
R3467 T5574 T5562 conj modified,added
R3468 T5575 T5574 prep based,modified
R3469 T5576 T5575 prep on,based
R3470 T5577 T5578 det the,similarity
R3471 T5578 T5576 pobj similarity,on
R3472 T5579 T5578 amod best,similarity
R3473 T5580 T5578 prep of,similarity
R3474 T5581 T5582 amod translated,peptides
R3475 T5582 T5580 pobj peptides,of
R3476 T5583 T5578 prep to,similarity
R3477 T5584 T5585 det the,proteins
R3478 T5585 T5583 pobj proteins,to
R3479 T5586 T5585 amod corresponding,proteins
R3480 T5587 T5585 nmod mouse,proteins
R3481 T5588 T5587 cc and,mouse
R3482 T5589 T5587 conj human,mouse
R3483 T5590 T5562 punct .,added
R3484 T5592 T5593 prep For,used
R3485 T5594 T5592 pobj regions,For
R3486 T5595 T5594 prep with,regions
R3487 T5596 T5597 amod low,similarity
R3488 T5597 T5595 pobj similarity,with
R3489 T5598 T5597 compound sequence,similarity
R3490 T5599 T5594 prep in,regions
R3491 T5600 T5601 compound T.,rubripes
R3492 T5601 T5599 pobj rubripes,in
R3493 T5602 T5593 punct ", ",used
R3494 T5603 T5604 amod genomic,sequences
R3495 T5604 T5593 nsubjpass sequences,used
R3496 T5605 T5604 prep from,sequences
R3497 T5606 T5607 det the,pufferfish
R3498 T5607 T5605 pobj pufferfish,from
R3499 T5608 T5609 amod fresh,water
R3500 T5609 T5607 compound water,pufferfish
R3501 T5610 T5607 punct ", ",pufferfish
R3502 T5611 T5612 compound Tetraodon,nigroviridis
R3503 T5612 T5607 appos nigroviridis,pufferfish
R3504 T5613 T5593 auxpass were,used
R3505 T5614 T5593 prep as,used
R3506 T5615 T5616 amod additional,means
R3507 T5616 T5614 pobj means,as
R3508 T5617 T5618 aux to,verify
R3509 T5618 T5616 advcl verify,means
R3510 T5619 T5620 det the,exons
R3511 T5620 T5618 dobj exons,verify
R3512 T5621 T5620 amod predicted,exons
R3513 T5622 T5593 punct .,used
R3514 T5624 T5625 det The,structure
R3515 T5625 T5627 nsubjpass structure,depicted
R3516 T5626 T5625 amod general,structure
R3517 T5628 T5625 prep of,structure
R3518 T5629 T5630 det the,genes
R3519 T5630 T5628 pobj genes,of
R3520 T5631 T5630 compound TACC,genes
R3521 T5632 T5630 cc and,genes
R3522 T5633 T5630 conj proteins,genes
R3523 T5634 T5627 auxpass is,depicted
R3524 T5635 T5627 prep in,depicted
R3525 T5636 T5635 pobj Fig.,in
R3526 T5637 T5636 nummod 4,Fig.
R3527 T5638 T5627 punct .,depicted
R3528 T5640 T5641 det The,feature
R3529 T5641 T5644 nsubjpass feature,located
R3530 T5642 T5641 amod main,feature
R3531 T5643 T5641 amod conserved,feature
R3532 T5645 T5641 prep of,feature
R3533 T5646 T5647 det the,family
R3534 T5647 T5645 pobj family,of
R3535 T5648 T5647 compound TACC,family
R3536 T5649 T5641 punct ", ",feature
R3537 T5650 T5651 det the,domain
R3538 T5651 T5641 appos domain,feature
R3539 T5652 T5651 compound TACC,domain
R3540 T5653 T5644 punct ", ",located
R3541 T5654 T5644 auxpass is,located
R3542 T5655 T5644 prep at,located
R3543 T5656 T5657 det the,terminus
R3544 T5657 T5655 pobj terminus,at
R3545 T5658 T5657 compound carboxy,terminus
R3546 T5659 T5657 prep of,terminus
R3547 T5660 T5661 det the,protein
R3548 T5661 T5659 pobj protein,of
R3549 T5662 T5644 punct .,located
R3550 T5664 T5665 prep In,comprises
R3551 T5666 T5667 det the,case
R3552 T5667 T5664 pobj case,In
R3553 T5668 T5667 prep of,case
R3554 T5669 T5670 det the,protein
R3555 T5670 T5668 pobj protein,of
R3556 T5671 T5672 compound C.,elegans
R3557 T5672 T5670 compound elegans,protein
R3558 T5673 T5670 compound TAC,protein
R3559 T5674 T5665 punct ", ",comprises
R3560 T5675 T5676 det this,structure
R3561 T5676 T5665 nsubj structure,comprises
R3562 T5677 T5678 det the,majority
R3563 T5678 T5665 dobj majority,comprises
R3564 T5679 T5678 prep of,majority
R3565 T5680 T5681 det the,protein
R3566 T5681 T5679 pobj protein,of
R3567 T5682 T5665 cc and,comprises
R3568 T5683 T5684 auxpass is,encoded
R3569 T5684 T5665 conj encoded,comprises
R3570 T5685 T5684 agent by,encoded
R3571 T5686 T5685 pobj two,by
R3572 T5687 T5686 prep of,two
R3573 T5688 T5689 det the,exons
R3574 T5689 T5687 pobj exons,of
R3575 T5690 T5689 nummod three,exons
R3576 T5691 T5689 prep of,exons
R3577 T5692 T5693 det the,gene
R3578 T5693 T5691 pobj gene,of
R3579 T5694 T5665 punct .,comprises
R3580 T5696 T5697 prep In,encoded
R3581 T5698 T5699 det the,organisms
R3582 T5699 T5696 pobj organisms,In
R3583 T5700 T5699 amod higher,organisms
R3584 T5701 T5699 punct ", ",organisms
R3585 T5702 T5703 compound D.,melanogaster
R3586 T5703 T5699 appos melanogaster,organisms
R3587 T5704 T5703 punct ", ",melanogaster
R3588 T5705 T5703 cc and,melanogaster
R3589 T5706 T5707 det the,intestinalis
R3590 T5707 T5703 conj intestinalis,melanogaster
R3591 T5708 T5709 compound deuterostomes,C.
R3592 T5709 T5707 compound C.,intestinalis
R3593 T5710 T5707 prep to,intestinalis
R3594 T5711 T5710 pobj human,to
R3595 T5712 T5697 punct ", ",encoded
R3596 T5713 T5714 det this,feature
R3597 T5714 T5697 nsubjpass feature,encoded
R3598 T5715 T5697 auxpass is,encoded
R3599 T5716 T5697 advmod also,encoded
R3600 T5717 T5697 agent by,encoded
R3601 T5718 T5719 det the,exons
R3602 T5719 T5717 pobj exons,by
R3603 T5720 T5719 amod final,exons
R3604 T5721 T5719 prep of,exons
R3605 T5722 T5723 det the,gene
R3606 T5723 T5721 pobj gene,of
R3607 T5724 T5725 punct (,five
R3608 T5725 T5697 parataxis five,encoded
R3609 T5726 T5725 prep in,five
R3610 T5727 T5728 compound D.,melanogaster
R3611 T5728 T5726 pobj melanogaster,in
R3612 T5729 T5725 punct ", ",five
R3613 T5730 T5725 appos seven,five
R3614 T5731 T5730 prep in,seven
R3615 T5732 T5733 det the,genes
R3616 T5733 T5731 pobj genes,in
R3617 T5734 T5733 compound deuterostome,genes
R3618 T5735 T5725 punct ),five
R3619 T5736 T5697 punct .,encoded
R3620 T5738 T5739 prep Outside,show
R3621 T5740 T5738 prep of,Outside
R3622 T5741 T5742 det the,domain
R3623 T5742 T5740 pobj domain,of
R3624 T5743 T5742 compound TACC,domain
R3625 T5744 T5739 punct ", ",show
R3626 T5745 T5739 advmod however,show
R3627 T5746 T5739 punct ", ",show
R3628 T5747 T5748 compound TACC,members
R3629 T5748 T5739 nsubj members,show
R3630 T5749 T5748 compound family,members
R3631 T5750 T5751 advmod relatively,little
R3632 T5751 T5752 amod little,homology
R3633 T5752 T5739 dobj homology,show
R3634 T5753 T5739 punct .,show
R3635 T5755 T5756 nsubj It,is
R3636 T5757 T5756 acomp interesting,is
R3637 T5758 T5759 mark that,contains
R3638 T5759 T5756 ccomp contains,is
R3639 T5760 T5761 det each,gene
R3640 T5761 T5759 nsubj gene,contains
R3641 T5762 T5761 compound TACC,gene
R3642 T5763 T5764 nummod one,exon
R3643 T5764 T5759 dobj exon,contains
R3644 T5765 T5764 amod large,exon
R3645 T5766 T5764 punct ", ",exon
R3646 T5767 T5768 dep which,shows
R3647 T5768 T5764 relcl shows,exon
R3648 T5769 T5770 amod considerable,variability
R3649 T5770 T5768 dobj variability,shows
R3650 T5771 T5768 prep between,shows
R3651 T5772 T5773 compound TACC,orthologues
R3652 T5773 T5771 pobj orthologues,between
R3653 T5774 T5768 punct ", ",shows
R3654 T5775 T5768 cc and,shows
R3655 T5776 T5768 conj constitutes,shows
R3656 T5777 T5778 det the,difference
R3657 T5778 T5776 dobj difference,constitutes
R3658 T5779 T5778 amod main,difference
R3659 T5780 T5778 prep between,difference
R3660 T5781 T5782 det the,genes
R3661 T5782 T5780 pobj genes,between
R3662 T5783 T5782 compound TACC3,genes
R3663 T5784 T5776 prep in,constitutes
R3664 T5785 T5786 det the,vertebrates
R3665 T5786 T5784 pobj vertebrates,in
R3666 T5787 T5788 punct (,see
R3667 T5788 T5759 parataxis see,contains
R3668 T5789 T5788 advmod below,see
R3669 T5790 T5788 punct ),see
R3670 T5791 T5756 punct .,is
R3671 T5793 T5794 prep In,contains
R3672 T5795 T5793 pobj deuterostomes,In
R3673 T5796 T5794 punct ", ",contains
R3674 T5797 T5798 det this,exon
R3675 T5798 T5794 nsubj exon,contains
R3676 T5799 T5800 det the,repeat
R3677 T5800 T5794 dobj repeat,contains
R3678 T5801 T5800 compound SDP,repeat
R3679 T5802 T5800 punct (,repeat
R3680 T5803 T5800 cc or,repeat
R3681 T5804 T5805 prep in,repeat
R3682 T5805 T5800 conj repeat,repeat
R3683 T5806 T5807 det the,case
R3684 T5807 T5804 pobj case,in
R3685 T5808 T5807 prep of,case
R3686 T5809 T5810 det the,TACC3
R3687 T5810 T5808 pobj TACC3,of
R3688 T5811 T5810 amod murine,TACC3
R3689 T5812 T5810 case 's,TACC3
R3690 T5813 T5805 punct ", ",repeat
R3691 T5814 T5805 det a,repeat
R3692 T5815 T5816 npadvmod rodent,specific
R3693 T5816 T5805 amod specific,repeat
R3694 T5817 T5816 punct -,specific
R3695 T5818 T5819 nummod 24,acid
R3696 T5819 T5805 compound acid,repeat
R3697 T5820 T5819 compound amino,acid
R3698 T5821 T5800 punct ),repeat
R3699 T5822 T5800 punct ", ",repeat
R3700 T5823 T5824 dep which,is
R3701 T5824 T5800 relcl is,repeat
R3702 T5825 T5824 acomp responsible,is
R3703 T5826 T5825 prep for,responsible
R3704 T5827 T5828 det the,binding
R3705 T5828 T5826 pobj binding,for
R3706 T5829 T5828 prep of,binding
R3707 T5830 T5831 det the,component
R3708 T5831 T5829 pobj component,of
R3709 T5832 T5833 nmod SWI,SNF
R3710 T5833 T5831 nmod SNF,component
R3711 T5834 T5833 punct /,SNF
R3712 T5835 T5836 compound chromatin,remodeling
R3713 T5836 T5833 appos remodeling,SNF
R3714 T5837 T5833 amod complex,SNF
R3715 T5838 T5831 appos GAS41,component
R3716 T5839 T5840 punct [,16
R3717 T5840 T5824 parataxis 16,is
R3718 T5841 T5840 nummod 15,16
R3719 T5842 T5840 punct ",",16
R3720 T5843 T5840 punct ],16
R3721 T5844 T5794 punct .,contains
R3722 T5846 T5847 prep Of,show
R3723 T5848 T5849 det the,proteins
R3724 T5849 T5846 pobj proteins,Of
R3725 T5850 T5849 compound vertebrate,proteins
R3726 T5851 T5849 compound TACC,proteins
R3727 T5852 T5847 punct ", ",show
R3728 T5853 T5854 det the,orthologues
R3729 T5854 T5847 nsubj orthologues,show
R3730 T5855 T5854 compound TACC3,orthologues
R3731 T5856 T5857 det the,variability
R3732 T5857 T5847 dobj variability,show
R3733 T5858 T5857 amod greatest,variability
R3734 T5859 T5857 prep in,variability
R3735 T5860 T5859 pobj size,in
R3736 T5861 T5860 cc and,size
R3737 T5862 T5860 conj sequence,size
R3738 T5863 T5847 punct ", ",show
R3739 T5864 T5847 advcl ranging,show
R3740 T5865 T5864 prep in,ranging
R3741 T5866 T5865 pobj size,in
R3742 T5867 T5864 prep from,ranging
R3743 T5868 T5869 nummod 599,acids
R3744 T5869 T5867 pobj acids,from
R3745 T5870 T5869 compound amino,acids
R3746 T5871 T5869 prep for,acids
R3747 T5872 T5873 det the,protein
R3748 T5873 T5871 pobj protein,for
R3749 T5874 T5873 compound rat,protein
R3750 T5875 T5873 compound TACC3,protein
R3751 T5876 T5867 punct ", ",from
R3752 T5877 T5867 prep to,from
R3753 T5878 T5879 nummod 942,acids
R3754 T5879 T5877 pobj acids,to
R3755 T5880 T5879 compound amino,acids
R3756 T5881 T5879 prep in,acids
R3757 T5882 T5883 det the,protein
R3758 T5883 T5881 pobj protein,in
R3759 T5884 T5883 compound Danio,protein
R3760 T5885 T5883 compound rerio,protein
R3761 T5886 T5847 punct .,show
R3762 T5888 T5889 det The,reasons
R3763 T5889 T5890 nsubj reasons,are
R3764 T5891 T5889 prep for,reasons
R3765 T5892 T5893 det these,differences
R3766 T5893 T5891 pobj differences,for
R3767 T5894 T5890 acomp apparent,are
R3768 T5895 T5890 prep from,are
R3769 T5896 T5897 det the,structure
R3770 T5897 T5895 pobj structure,from
R3771 T5898 T5897 amod genomic,structure
R3772 T5899 T5897 prep of,structure
R3773 T5900 T5901 det the,orthologues
R3774 T5901 T5899 pobj orthologues,of
R3775 T5902 T5901 compound TACC3,orthologues
R3776 T5903 T5890 punct .,are
R3777 T5905 T5906 nsubjpass TACC3,divided
R3778 T5907 T5906 aux can,divided
R3779 T5908 T5906 auxpass be,divided
R3780 T5909 T5906 prep into,divided
R3781 T5910 T5911 nummod three,sections
R3782 T5911 T5909 pobj sections,into
R3783 T5912 T5911 punct : ,sections
R3784 T5913 T5914 det a,region
R3785 T5914 T5911 appos region,sections
R3786 T5915 T5914 amod conserved,region
R3787 T5916 T5917 npadvmod N,terminal
R3788 T5917 T5914 amod terminal,region
R3789 T5918 T5917 punct -,terminal
R3790 T5919 T5914 punct (,region
R3791 T5920 T5914 appos CNTR,region
R3792 T5921 T5914 punct ),region
R3793 T5922 T5914 prep of,region
R3794 T5923 T5924 nummod 108,acids
R3795 T5924 T5922 pobj acids,of
R3796 T5925 T5924 compound amino,acids
R3797 T5926 T5924 punct ", ",acids
R3798 T5927 T5924 acl encoded,acids
R3799 T5928 T5927 agent by,encoded
R3800 T5929 T5930 nmod exons,2
R3801 T5930 T5928 pobj 2,by
R3802 T5931 T5930 cc and,2
R3803 T5932 T5930 conj 3,2
R3804 T5933 T5927 prep in,encoded
R3805 T5934 T5935 det each,gene
R3806 T5935 T5933 pobj gene,in
R3807 T5936 T5935 compound vertebrate,gene
R3808 T5937 T5935 compound TACC3,gene
R3809 T5938 T5914 punct ", ",region
R3810 T5939 T5940 det the,domain
R3811 T5940 T5914 conj domain,region
R3812 T5941 T5940 amod conserved,domain
R3813 T5942 T5940 compound TACC,domain
R3814 T5943 T5940 acl distributed,domain
R3815 T5944 T5943 prep over,distributed
R3816 T5945 T5946 det the,exons
R3817 T5946 T5944 pobj exons,over
R3818 T5947 T5946 amod final,exons
R3819 T5948 T5946 nummod seven,exons
R3820 T5949 T5940 punct ", ",domain
R3821 T5950 T5940 cc and,domain
R3822 T5951 T5952 det a,region
R3823 T5952 T5940 conj region,domain
R3824 T5953 T5954 advmod highly,variable
R3825 T5954 T5952 amod variable,region
R3826 T5955 T5952 amod central,region
R3827 T5956 T5906 punct .,divided
R3828 T5958 T5959 det The,lack
R3829 T5959 T5960 nsubjpass lack,noted
R3830 T5961 T5959 prep of,lack
R3831 T5962 T5961 pobj conservation,of
R3832 T5963 T5962 prep in,conservation
R3833 T5964 T5965 preconj both,size
R3834 T5965 T5963 pobj size,in
R3835 T5966 T5965 cc and,size
R3836 T5967 T5965 conj sequence,size
R3837 T5968 T5965 prep of,size
R3838 T5969 T5970 det the,portion
R3839 T5970 T5968 pobj portion,of
R3840 T5971 T5970 amod central,portion
R3841 T5972 T5970 prep of,portion
R3842 T5973 T5974 det the,proteins
R3843 T5974 T5972 pobj proteins,of
R3844 T5975 T5974 compound TACC3,proteins
R3845 T5976 T5974 prep of,proteins
R3846 T5977 T5978 amod human,mouse
R3847 T5978 T5976 pobj mouse,of
R3848 T5979 T5978 cc and,mouse
R3849 T5980 T5960 aux has,noted
R3850 T5981 T5960 auxpass been,noted
R3851 T5982 T5960 advmod previously,noted
R3852 T5983 T5960 punct ", ",noted
R3853 T5984 T5960 cc and,noted
R3854 T5985 T5960 conj accounts,noted
R3855 T5986 T5985 prep for,accounts
R3856 T5987 T5988 det the,difference
R3857 T5988 T5986 pobj difference,for
R3858 T5989 T5988 amod major,difference
R3859 T5990 T5988 prep between,difference
R3860 T5991 T5992 det these,orthologues
R3861 T5992 T5990 pobj orthologues,between
R3862 T5993 T5992 nummod two,orthologues
R3863 T5994 T5995 punct [,2
R3864 T5995 T5985 parataxis 2,accounts
R3865 T5996 T5995 punct ],2
R3866 T5997 T5960 punct .,noted
R3867 T5999 T6000 det The,majority
R3868 T6000 T6001 nsubjpass majority,encoded
R3869 T6002 T6000 prep of,majority
R3870 T6003 T6004 det this,portion
R3871 T6004 T6002 pobj portion,of
R3872 T6005 T6004 amod central,portion
R3873 T6006 T6004 punct ", ",portion
R3874 T6007 T6008 dep which,contains
R3875 T6008 T6004 relcl contains,portion
R3876 T6009 T6010 det the,motifs
R3877 T6010 T6008 dobj motifs,contains
R3878 T6011 T6010 compound SDP,motifs
R3879 T6012 T6010 compound repeat,motifs
R3880 T6013 T6001 punct ", ",encoded
R3881 T6014 T6001 auxpass is,encoded
R3882 T6015 T6001 agent by,encoded
R3883 T6016 T6017 nummod one,exon
R3884 T6017 T6015 pobj exon,by
R3885 T6018 T6001 prep in,encoded
R3886 T6019 T6018 pobj human,in
R3887 T6020 T6019 cc and,human
R3888 T6021 T6022 det the,pufferfish
R3889 T6022 T6019 conj pufferfish,human
R3890 T6023 T6024 punct (,emb|CAAB01001184
R3891 T6024 T6001 parataxis emb|CAAB01001184,encoded
R3892 T6025 T6024 punct ),emb|CAAB01001184
R3893 T6026 T6001 punct .,encoded
R3894 T6028 T6029 prep In,composed
R3895 T6030 T6028 pobj rodents,In
R3896 T6031 T6029 punct ", ",composed
R3897 T6032 T6029 advmod however,composed
R3898 T6033 T6029 punct ", ",composed
R3899 T6034 T6035 det this,region
R3900 T6035 T6029 nsubjpass region,composed
R3901 T6036 T6029 auxpass is,composed
R3902 T6037 T6038 advmod almost,entirely
R3903 T6038 T6029 advmod entirely,composed
R3904 T6039 T6029 prep of,composed
R3905 T6040 T6041 nummod seven,repeats
R3906 T6041 T6039 pobj repeats,of
R3907 T6042 T6043 nummod 24,acid
R3908 T6043 T6041 compound acid,repeats
R3909 T6044 T6043 compound amino,acid
R3910 T6045 T6041 punct ", ",repeats
R3911 T6046 T6047 dep which,located
R3912 T6047 T6041 relcl located,repeats
R3913 T6048 T6047 auxpass are,located
R3914 T6049 T6047 prep in,located
R3915 T6050 T6051 det a,exon
R3916 T6051 T6049 pobj exon,in
R3917 T6052 T6051 amod single,exon
R3918 T6053 T6051 prep of,exon
R3919 T6054 T6055 det the,genes
R3920 T6055 T6053 pobj genes,of
R3921 T6056 T6055 nmod mouse,genes
R3922 T6057 T6056 cc and,mouse
R3923 T6058 T6056 conj rat,mouse
R3924 T6059 T6055 compound TACC3,genes
R3925 T6060 T6029 punct .,composed
R3926 T6062 T6063 nsubjpass It,reported
R3927 T6064 T6063 aux has,reported
R3928 T6065 T6063 auxpass been,reported
R3929 T6066 T6063 advmod previously,reported
R3930 T6067 T6068 mark that,are
R3931 T6068 T6063 ccomp are,reported
R3932 T6069 T6068 expl there,are
R3933 T6070 T6071 nummod four,variants
R3934 T6071 T6068 attr variants,are
R3935 T6072 T6073 compound mouse,TACC3
R3936 T6073 T6071 compound TACC3,variants
R3937 T6074 T6071 compound splice,variants
R3938 T6075 T6076 dep that,differ
R3939 T6076 T6071 relcl differ,variants
R3940 T6077 T6076 prep in,differ
R3941 T6078 T6079 det the,number
R3942 T6079 T6077 pobj number,in
R3943 T6080 T6079 prep of,number
R3944 T6081 T6082 det these,repeats
R3945 T6082 T6080 pobj repeats,of
R3946 T6083 T6084 punct [,17
R3947 T6084 T6063 parataxis 17,reported
R3948 T6085 T6084 nummod 2,17
R3949 T6086 T6084 punct ",",17
R3950 T6087 T6084 nummod 7,17
R3951 T6088 T6084 punct ",",17
R3952 T6089 T6084 punct ],17
R3953 T6090 T6063 punct .,reported
R3954 T6092 T6093 mark As,are
R3955 T6093 T6096 advcl are,appears
R3956 T6094 T6095 det these,repeats
R3957 T6095 T6093 nsubj repeats,are
R3958 T6097 T6093 acomp present,are
R3959 T6098 T6093 prep in,are
R3960 T6099 T6100 det a,exon
R3961 T6100 T6098 pobj exon,in
R3962 T6101 T6100 amod single,exon
R3963 T6102 T6096 punct ", ",appears
R3964 T6103 T6096 nsubj it,appears
R3965 T6104 T6096 oprd likely,appears
R3966 T6105 T6106 mark that,be
R3967 T6106 T6096 ccomp be,appears
R3968 T6107 T6108 det these,sequences
R3969 T6108 T6106 nsubj sequences,be
R3970 T6109 T6108 amod different,sequences
R3971 T6110 T6106 aux may,be
R3972 T6111 T6112 det the,result
R3973 T6112 T6106 attr result,be
R3974 T6113 T6112 prep of,result
R3975 T6114 T6115 det the,polymerases
R3976 T6115 T6113 pobj polymerases,of
R3977 T6116 T6115 compound DNA,polymerases
R3978 T6117 T6115 acl used,polymerases
R3979 T6118 T6117 prep in,used
R3980 T6119 T6120 det the,synthesis
R3981 T6120 T6118 pobj synthesis,in
R3982 T6121 T6120 compound cDNA,synthesis
R3983 T6122 T6115 cc and,polymerases
R3984 T6123 T6122 punct /,and
R3985 T6124 T6122 cc or,and
R3986 T6125 T6126 compound PCR,reaction
R3987 T6126 T6127 nsubj reaction,stuttering
R3988 T6127 T6115 conj stuttering,polymerases
R3989 T6128 T6127 prep through,stuttering
R3990 T6129 T6130 det the,motif
R3991 T6130 T6128 pobj motif,through
R3992 T6131 T6130 compound repeat,motif
R3993 T6132 T6096 punct .,appears
R3994 T6134 T6135 det The,sequence
R3995 T6135 T6137 nsubj sequence,is
R3996 T6136 T6135 amod correct,sequence
R3997 T6138 T6135 punct ", ",sequence
R3998 T6139 T6135 acl reported,sequence
R3999 T6140 T6139 agent by,reported
R4000 T6141 T6140 pobj Sadek,by
R4001 T6142 T6143 advmod et,al
R4002 T6143 T6141 advmod al,Sadek
R4003 T6144 T6145 punct [,7
R4004 T6145 T6139 parataxis 7,reported
R4005 T6146 T6145 punct ],7
R4006 T6147 T6137 punct ", ",is
R4007 T6148 T6149 det the,one
R4008 T6149 T6137 attr one,is
R4009 T6150 T6149 acl used,one
R4010 T6151 T6150 prep throughout,used
R4011 T6152 T6153 det the,entirety
R4012 T6153 T6151 pobj entirety,throughout
R4013 T6154 T6153 prep of,entirety
R4014 T6155 T6156 det this,manuscript
R4015 T6156 T6154 pobj manuscript,of
R4016 T6157 T6137 punct .,is
R4017 T6159 T6160 det These,repeats
R4018 T6160 T6161 nsubj repeats,are
R4019 T6162 T6161 neg not,are
R4020 T6163 T6161 acomp evident,are
R4021 T6164 T6161 prep in,are
R4022 T6165 T6166 det the,protein
R4023 T6166 T6164 pobj protein,in
R4024 T6167 T6166 compound rabbit,protein
R4025 T6168 T6166 punct ", ",protein
R4026 T6169 T6166 cc or,protein
R4027 T6170 T6171 det any,protein
R4028 T6171 T6166 conj protein,protein
R4029 T6172 T6171 amod other,protein
R4030 T6173 T6171 compound TACC,protein
R4031 T6174 T6161 punct ", ",are
R4032 T6175 T6161 cc and,are
R4033 T6176 T6177 aux may,indicate
R4034 T6177 T6161 conj indicate,are
R4035 T6178 T6179 mark that,evolved
R4036 T6179 T6177 ccomp evolved,indicate
R4037 T6180 T6181 det the,TACC3
R4038 T6181 T6179 nsubj TACC3,evolved
R4039 T6182 T6181 compound rodent,TACC3
R4040 T6183 T6179 aux has,evolved
R4041 T6184 T6185 amod distinct,functions
R4042 T6185 T6179 dobj functions,evolved
R4043 T6186 T6177 punct ", ",indicate
R4044 T6187 T6188 mark as,noted
R4045 T6188 T6177 advcl noted,indicate
R4046 T6189 T6188 aux has,noted
R4047 T6190 T6188 advmod already,noted
R4048 T6191 T6188 auxpass been,noted
R4049 T6192 T6188 prep for,noted
R4050 T6193 T6194 det the,TACC3
R4051 T6194 T6192 pobj TACC3,for
R4052 T6195 T6194 amod amphibian,TACC3
R4053 T6196 T6194 compound Xenopus,TACC3
R4054 T6197 T6194 punct ", ",TACC3
R4055 T6198 T6194 appos maskin,TACC3
R4056 T6199 T6200 punct [,8
R4057 T6200 T6188 parataxis 8,noted
R4058 T6201 T6200 punct ],8
R4059 T6202 T6161 punct .,are

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5361 12-19 SO_EXT:0001026 denotes genomic
T5362 53-64 SO_EXT:genomic_DNA denotes genomic DNA
T5363 61-64 CHEBI_SO_EXT:DNA denotes DNA
T5364 65-74 SO_EXT:biological_sequence denotes sequences
T5365 96-107 SO:0000858 denotes orthologous
T5366 113-118 SO_EXT:0000704 denotes genes
T5367 122-127 NCBITaxon:9606 denotes human
T5368 129-134 NCBITaxon:10088 denotes mouse
T5369 136-139 NCBITaxon:10114 denotes rat
T5370 141-151 NCBITaxon:31031 denotes pufferfish
T5371 153-168 NCBITaxon:7719 denotes C. intestinalis
T5372 170-185 NCBITaxon:7227 denotes D. melanogaster
T5373 190-200 NCBITaxon:6239 denotes C. elegans
T5374 268-275 SO_EXT:0001026 denotes genomic
T5375 299-303 SO_EXT:0000704 denotes gene
T5376 324-327 NCBITaxon:10114 denotes rat
T5377 332-342 NCBITaxon:31031 denotes pufferfish
T5378 344-349 SO_EXT:0000147 denotes exons
T5379 364-372 SO_EXT:sequence_alteration_process denotes modified
T5380 405-415 GO:0006412 denotes translated
T5381 416-424 CHEBI_SO_EXT:peptide_or_peptide_region denotes peptides
T5382 446-451 NCBITaxon:10088 denotes mouse
T5383 456-461 NCBITaxon:9606 denotes human
T5384 462-470 CHEBI_PR_EXT:protein denotes proteins
T5385 493-501 SO_EXT:biological_sequence denotes sequence
T5386 516-527 NCBITaxon:31033 denotes T. rubripes
T5387 529-536 SO_EXT:0001026 denotes genomic
T5388 537-546 SO_EXT:biological_sequence denotes sequences
T5389 563-568 CHEBI:15377 denotes water
T5390 569-579 NCBITaxon:31031 denotes pufferfish
T5391 581-603 NCBITaxon:99883 denotes Tetraodon nigroviridis
T5392 658-663 SO_EXT:0000147 denotes exons
T5393 699-704 SO_EXT:0000704 denotes genes
T5394 709-717 CHEBI_PR_EXT:protein denotes proteins
T5395 750-759 SO_EXT:biological_conservation_process_or_quality denotes conserved
T5396 797-803 SO_EXT:0000417 denotes domain
T5397 823-839 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes carboxy terminus
T5398 847-854 CHEBI_PR_EXT:protein denotes protein
T5399 875-885 NCBITaxon:6239 denotes C. elegans
T5400 890-897 CHEBI_PR_EXT:protein denotes protein
T5401 944-951 CHEBI_PR_EXT:protein denotes protein
T5402 959-966 SO_EXT:sequence_coding_function denotes encoded
T5403 987-992 SO_EXT:0000147 denotes exons
T5404 1000-1004 SO_EXT:0000704 denotes gene
T5405 1020-1029 NCBITaxon:1 denotes organisms
T5406 1031-1046 NCBITaxon:7227 denotes D. melanogaster
T5407 1056-1069 NCBITaxon:33511 denotes deuterostomes
T5408 1070-1085 NCBITaxon:7719 denotes C. intestinalis
T5409 1089-1094 NCBITaxon:9606 denotes human
T5410 1117-1124 SO_EXT:sequence_coding_function denotes encoded
T5411 1138-1143 SO_EXT:0000147 denotes exons
T5412 1151-1155 SO_EXT:0000704 denotes gene
T5413 1165-1180 NCBITaxon:7227 denotes D. melanogaster
T5414 1195-1207 NCBITaxon:33511 denotes deuterostome
T5415 1208-1213 SO_EXT:0000704 denotes genes
T5416 1236-1242 SO_EXT:0000417 denotes domain
T5417 1296-1304 SO:0000857 denotes homology
T5418 1339-1343 SO_EXT:0000704 denotes gene
T5419 1363-1367 SO_EXT:0000147 denotes exon
T5420 1419-1430 SO_EXT:0000855 denotes orthologues
T5421 1480-1485 PR_EXT:000016008 denotes TACC3
T5422 1486-1491 SO_EXT:0000704 denotes genes
T5423 1499-1510 NCBITaxon:7742 denotes vertebrates
T5424 1527-1540 NCBITaxon:33511 denotes deuterostomes
T5425 1547-1551 SO_EXT:0000147 denotes exon
T5426 1569-1575 SO_EXT:sequence_repeat_unit_or_region denotes repeat
T5427 1599-1605 NCBITaxon:39107 denotes murine
T5428 1606-1613 PR_EXT:000016008 denotes TACC3's
T5429 1617-1623 NCBITaxon:9989 denotes rodent
T5430 1636-1646 CHEBI_SO_EXT:amino_acid denotes amino acid
T5431 1647-1653 SO_EXT:sequence_repeat_unit_or_region denotes repeat
T5432 1685-1692 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T5433 1700-1736 GO:0016514 denotes SWI/SNF chromatin remodeling complex
T5434 1708-1728 GO:0006338 denotes chromatin remodeling
T5435 1747-1752 PR_EXT:000017527 denotes GAS41
T5436 1769-1779 NCBITaxon:7742 denotes vertebrate
T5437 1785-1793 CHEBI_PR_EXT:protein denotes proteins
T5438 1799-1804 PR_EXT:000016008 denotes TACC3
T5439 1805-1816 SO_EXT:0000855 denotes orthologues
T5440 1859-1867 SO_EXT:biological_sequence denotes sequence
T5441 1894-1905 CHEBI_SO_EXT:amino_acid denotes amino acids
T5442 1914-1917 NCBITaxon:10114 denotes rat
T5443 1918-1923 PR_EXT:000016008 denotes TACC3
T5444 1924-1931 CHEBI_PR_EXT:protein denotes protein
T5445 1940-1951 CHEBI_SO_EXT:amino_acid denotes amino acids
T5446 1959-1970 NCBITaxon:7955 denotes Danio rerio
T5447 1971-1978 CHEBI_PR_EXT:protein denotes protein
T5448 2036-2043 SO_EXT:0001026 denotes genomic
T5449 2061-2066 PR_EXT:000016008 denotes TACC3
T5450 2067-2078 SO_EXT:0000855 denotes orthologues
T5451 2080-2085 PR_EXT:000016008 denotes TACC3
T5452 2124-2133 SO_EXT:biological_conservation_process_or_quality denotes conserved
T5453 2134-2144 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-terminal
T5454 2166-2177 CHEBI_SO_EXT:amino_acid denotes amino acids
T5455 2179-2186 SO_EXT:sequence_coding_function denotes encoded
T5456 2190-2195 SO_EXT:0000147 denotes exons
T5457 2212-2222 NCBITaxon:7742 denotes vertebrate
T5458 2223-2228 PR_EXT:000016008 denotes TACC3
T5459 2229-2233 SO_EXT:0000704 denotes gene
T5460 2239-2248 SO_EXT:biological_conservation_process_or_quality denotes conserved
T5461 2254-2260 SO_EXT:0000417 denotes domain
T5462 2294-2299 SO_EXT:0000147 denotes exons
T5463 2351-2363 SO_EXT:biological_conservation_process_or_quality denotes conservation
T5464 2381-2389 SO_EXT:biological_sequence denotes sequence
T5465 2420-2425 PR_EXT:000016008 denotes TACC3
T5466 2426-2434 CHEBI_PR_EXT:protein denotes proteins
T5467 2438-2443 NCBITaxon:9606 denotes human
T5468 2448-2453 NCBITaxon:10088 denotes mouse
T5469 2537-2548 SO_EXT:0000855 denotes orthologues
T5470 2615-2621 SO_EXT:sequence_repeat_unit_or_region denotes repeat
T5471 2622-2628 SO_EXT:sequence_or_structure_motif denotes motifs
T5472 2633-2640 SO_EXT:sequence_coding_function denotes encoded
T5473 2648-2652 SO_EXT:0000147 denotes exon
T5474 2656-2661 NCBITaxon:9606 denotes human
T5475 2670-2680 NCBITaxon:31031 denotes pufferfish
T5476 2704-2711 NCBITaxon:9989 denotes rodents
T5477 2774-2784 CHEBI_SO_EXT:amino_acid denotes amino acid
T5478 2785-2792 SO_EXT:sequence_repeat_unit_or_region denotes repeats
T5479 2824-2828 SO_EXT:0000147 denotes exon
T5480 2836-2841 NCBITaxon:10088 denotes mouse
T5481 2846-2849 NCBITaxon:10114 denotes rat
T5482 2850-2855 PR_EXT:000016008 denotes TACC3
T5483 2856-2861 SO_EXT:0000704 denotes genes
T5484 2915-2920 NCBITaxon:10088 denotes mouse
T5485 2921-2926 PR_EXT:000016008 denotes TACC3
T5486 2927-2933 GO:0008380 denotes splice
T5487 2927-2942 SO_EXT:alternative_splice_variant denotes splice variants
T5488 2978-2985 SO_EXT:sequence_repeat_unit_or_region denotes repeats
T5489 3005-3012 SO_EXT:sequence_repeat_unit_or_region denotes repeats
T5490 3037-3041 SO_EXT:0000147 denotes exon
T5491 3082-3091 SO_EXT:biological_sequence denotes sequences
T5492 3117-3120 CHEBI_SO_EXT:DNA denotes DNA
T5493 3117-3132 GO_EXT:0034061 denotes DNA polymerases
T5494 3145-3149 SO_EXT:cDNA denotes cDNA
T5495 3203-3209 SO_EXT:sequence_repeat_unit_or_region denotes repeat
T5496 3210-3215 SO_EXT:sequence_or_structure_motif denotes motif
T5497 3229-3237 SO_EXT:biological_sequence denotes sequence
T5498 3334-3341 SO_EXT:sequence_repeat_unit_or_region denotes repeats
T5499 3365-3371 NCBITaxon:9986 denotes rabbit
T5500 3372-3379 CHEBI_PR_EXT:protein denotes protein
T5501 3399-3406 CHEBI_PR_EXT:protein denotes protein
T5502 3434-3440 NCBITaxon:9989 denotes rodent
T5503 3441-3446 PR_EXT:000016008 denotes TACC3
T5504 3513-3522 NCBITaxon:8292 denotes amphibian
T5505 3523-3530 NCBITaxon:8353 denotes Xenopus
T5506 3531-3536 PR_EXT:000016008 denotes TACC3

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5266 12-19 SO:0001026 denotes genomic
T5267 53-60 SO:0001026 denotes genomic
T5268 96-107 SO:0000858 denotes orthologous
T5269 113-118 SO:0000704 denotes genes
T5270 122-127 NCBITaxon:9606 denotes human
T5271 129-134 NCBITaxon:10088 denotes mouse
T5272 136-139 NCBITaxon:10114 denotes rat
T5273 141-151 NCBITaxon:31031 denotes pufferfish
T5274 153-168 NCBITaxon:7719 denotes C. intestinalis
T5275 170-185 NCBITaxon:7227 denotes D. melanogaster
T5276 190-200 NCBITaxon:6239 denotes C. elegans
T5277 268-275 SO:0001026 denotes genomic
T5278 299-303 SO:0000704 denotes gene
T5279 324-327 NCBITaxon:10114 denotes rat
T5280 332-342 NCBITaxon:31031 denotes pufferfish
T5281 344-349 SO:0000147 denotes exons
T5282 405-415 GO:0006412 denotes translated
T5283 446-451 NCBITaxon:10088 denotes mouse
T5284 456-461 NCBITaxon:9606 denotes human
T5285 516-527 NCBITaxon:31033 denotes T. rubripes
T5286 529-536 SO:0001026 denotes genomic
T5287 563-568 CHEBI:15377 denotes water
T5288 569-579 NCBITaxon:31031 denotes pufferfish
T5289 581-603 NCBITaxon:99883 denotes Tetraodon nigroviridis
T5290 658-663 SO:0000147 denotes exons
T5291 699-704 SO:0000704 denotes genes
T5292 797-803 SO:0000417 denotes domain
T5293 875-885 NCBITaxon:6239 denotes C. elegans
T5294 987-992 SO:0000147 denotes exons
T5295 1000-1004 SO:0000704 denotes gene
T5296 1020-1029 NCBITaxon:1 denotes organisms
T5297 1031-1046 NCBITaxon:7227 denotes D. melanogaster
T5298 1056-1069 NCBITaxon:33511 denotes deuterostomes
T5299 1070-1085 NCBITaxon:7719 denotes C. intestinalis
T5300 1089-1094 NCBITaxon:9606 denotes human
T5301 1138-1143 SO:0000147 denotes exons
T5302 1151-1155 SO:0000704 denotes gene
T5303 1165-1180 NCBITaxon:7227 denotes D. melanogaster
T5304 1195-1207 NCBITaxon:33511 denotes deuterostome
T5305 1208-1213 SO:0000704 denotes genes
T5306 1236-1242 SO:0000417 denotes domain
T5307 1296-1304 SO:0000857 denotes homology
T5308 1339-1343 SO:0000704 denotes gene
T5309 1363-1367 SO:0000147 denotes exon
T5310 1419-1430 SO:0000855 denotes orthologues
T5311 1480-1485 PR:000016008 denotes TACC3
T5312 1486-1491 SO:0000704 denotes genes
T5313 1499-1510 NCBITaxon:7742 denotes vertebrates
T5314 1527-1540 NCBITaxon:33511 denotes deuterostomes
T5315 1547-1551 SO:0000147 denotes exon
T5316 1599-1605 NCBITaxon:39107 denotes murine
T5317 1606-1613 PR:000016008 denotes TACC3's
T5318 1617-1623 NCBITaxon:9989 denotes rodent
T5319 1700-1736 GO:0016514 denotes SWI/SNF chromatin remodeling complex
T5320 1708-1728 GO:0006338 denotes chromatin remodeling
T5321 1747-1752 PR:000017527 denotes GAS41
T5322 1769-1779 NCBITaxon:7742 denotes vertebrate
T5323 1799-1804 PR:000016008 denotes TACC3
T5324 1805-1816 SO:0000855 denotes orthologues
T5325 1914-1917 NCBITaxon:10114 denotes rat
T5326 1918-1923 PR:000016008 denotes TACC3
T5327 1959-1970 NCBITaxon:7955 denotes Danio rerio
T5328 2036-2043 SO:0001026 denotes genomic
T5329 2061-2066 PR:000016008 denotes TACC3
T5330 2067-2078 SO:0000855 denotes orthologues
T5331 2080-2085 PR:000016008 denotes TACC3
T5332 2190-2195 SO:0000147 denotes exons
T5333 2212-2222 NCBITaxon:7742 denotes vertebrate
T5334 2223-2228 PR:000016008 denotes TACC3
T5335 2229-2233 SO:0000704 denotes gene
T5336 2254-2260 SO:0000417 denotes domain
T5337 2294-2299 SO:0000147 denotes exons
T5338 2420-2425 PR:000016008 denotes TACC3
T5339 2438-2443 NCBITaxon:9606 denotes human
T5340 2448-2453 NCBITaxon:10088 denotes mouse
T5341 2537-2548 SO:0000855 denotes orthologues
T5342 2648-2652 SO:0000147 denotes exon
T5343 2656-2661 NCBITaxon:9606 denotes human
T5344 2670-2680 NCBITaxon:31031 denotes pufferfish
T5345 2704-2711 NCBITaxon:9989 denotes rodents
T5346 2824-2828 SO:0000147 denotes exon
T5347 2836-2841 NCBITaxon:10088 denotes mouse
T5348 2846-2849 NCBITaxon:10114 denotes rat
T5349 2850-2855 PR:000016008 denotes TACC3
T5350 2856-2861 SO:0000704 denotes genes
T5351 2915-2920 NCBITaxon:10088 denotes mouse
T5352 2921-2926 PR:000016008 denotes TACC3
T5353 2927-2933 GO:0008380 denotes splice
T5354 3037-3041 SO:0000147 denotes exon
T5355 3365-3371 NCBITaxon:9986 denotes rabbit
T5356 3434-3440 NCBITaxon:9989 denotes rodent
T5357 3441-3446 PR:000016008 denotes TACC3
T5358 3513-3522 NCBITaxon:8292 denotes amphibian
T5359 3523-3530 NCBITaxon:8353 denotes Xenopus
T5360 3531-3536 PR:000016008 denotes TACC3

2_test

Id Subject Object Predicate Lexical cue
15207008-11903063-9666005 1754-1756 11903063 denotes 15
15207008-11756182-9666006 1757-1759 11756182 denotes 16
15207008-10366448-9666007 2550-2551 10366448 denotes 2
15207008-10366448-9666008 2987-2988 10366448 denotes 2
15207008-11025203-9666009 2989-2990 11025203 denotes 7
15207008-12237944-9666010 2991-2993 12237944 denotes 17
15207008-11025203-9666011 3264-3265 11025203 denotes 7
15207008-10635326-9666012 3546-3547 10635326 denotes 8