PMC:4301621 / 8490-9291 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/4301621","sourcedb":"PMC","sourceid":"4301621","source_url":"https://www.ncbi.nlm.nih.gov/pmc/4301621","text":"In model iCY1106, four compartments (extracellular, cytoplasmic, peroxisome and mitochondrial compartments) were linked by 141 trans-plasma membrane transport reactions, 98 cytoplasmic-mitochondrial transport reactions and eight cytoplasmic-peroxisome transport reactions (Additional file 1). The extracellular compartment contained 267 reactions, including 216 exchange reactions and 51 metabolic reactions. These metabolic reactions catalyzed by extracellular enzymes may enable M. alpina to adapt to different environmental conditions. For example, M. alpina grows on different carbohydrates such as glycerol [24], sucrose [24], d-mannose [25], and raffinose [25] using various extracellular galactosidases. The peroxisome compartment contained 34 reactions mostly related to glyoxylate metabolism.","tracks":[{"project":"2_test","denotations":[{"id":"25582171-21365447-14905480","span":{"begin":613,"end":615},"obj":"21365447"},{"id":"25582171-21365447-14905481","span":{"begin":627,"end":629},"obj":"21365447"}],"attributes":[{"subj":"25582171-21365447-14905480","pred":"source","obj":"2_test"},{"subj":"25582171-21365447-14905481","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"2_test","color":"#ec93af","default":true}]}]}}