PMC:4236617 / 32454-32928 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/4236617","sourcedb":"PMC","sourceid":"4236617","source_url":"http://www.ncbi.nlm.nih.gov/pmc/4236617","text":"Figure 6 Phylogeny of L. amylovorus Slp:s. A neighbour-joining phylogenetic tree based on L. amylovorus Slp sequences was generated by creating a multiple amino acid sequence alignment of the predicted S-layer proteins with MUSCLE [39], by eliminating poorly aligned positions using GBLOCKS [40], and by generating phylogenies using the PhyML package [41]. Numbers 1–3 indicate the presence of several slp genes in the same strain. *, the corresponding gene is expressed.\n\n","tracks":[{"project":"2_test","denotations":[{"id":"25070625-15034147-12189982","span":{"begin":233,"end":235},"obj":"15034147"},{"id":"25070625-17654362-12189983","span":{"begin":293,"end":295},"obj":"17654362"},{"id":"25070625-14530136-12189984","span":{"begin":353,"end":355},"obj":"14530136"}],"attributes":[{"subj":"25070625-15034147-12189982","pred":"source","obj":"2_test"},{"subj":"25070625-17654362-12189983","pred":"source","obj":"2_test"},{"subj":"25070625-14530136-12189984","pred":"source","obj":"2_test"}]},{"project":"MicrobeTaxon","denotations":[{"id":"T314","span":{"begin":23,"end":36},"obj":"1604"},{"id":"T315","span":{"begin":91,"end":104},"obj":"1604"}],"namespaces":[{"prefix":"_base","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"attributes":[{"subj":"T314","pred":"source","obj":"MicrobeTaxon"},{"subj":"T315","pred":"source","obj":"MicrobeTaxon"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"2_test","color":"#b4ec93","default":true},{"id":"MicrobeTaxon","color":"#ec93ce"}]}]}}