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PMC:3589482 / 9041-11271 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5894 2229-2230 . denotes .
T5893 2218-2229 NNS denotes experiments
T5892 2214-2217 DT denotes the
T5891 2211-2213 IN denotes in
T5890 2206-2210 VBN denotes used
T5889 2201-2205 VBD denotes were
T5888 2190-2200 NNS denotes constructs
T5887 2181-2189 VBD denotes verified
T5886 2172-2180 NN denotes Sequence
T5885 2170-2171 . denotes .
T5884 2162-2170 NN denotes promoter
T5883 2153-2161 NNP denotes SerpinB2
T5882 2146-2152 NN denotes murine
T5881 2136-2145 JJ denotes wild-type
T5880 2132-2135 DT denotes the
T5879 2129-2131 IN denotes of
T5878 2122-2128 NN denotes region
T5877 2118-2121 CD denotes +92
T5876 2117-2118 NN denotes /
T5875 2114-2117 CD denotes 539
T5874 2113-2114 NN denotes −
T5873 2109-2112 DT denotes the
T5872 2106-2108 IN denotes of
T5871 2100-2105 NN denotes place
T5870 2097-2099 IN denotes in
T5869 2087-2096 NN denotes pGLmP-539
T5868 2084-2086 IN denotes of
T5867 2078-2083 NNS denotes sites
T5866 2066-2077 NN denotes restriction
T5865 2064-2065 PRP denotes I
T5864 2060-2063 NNP denotes Xho
T5863 2056-2059 CC denotes and
T5862 2054-2055 PRP denotes I
T5861 2049-2053 NNP denotes EcoR
T5860 2045-2048 DT denotes the
T5859 2037-2044 IN denotes between
T5858 2030-2036 VBN denotes cloned
T5857 2026-2029 CC denotes and
T5856 2024-2025 PRP denotes I
T5855 2020-2023 NNP denotes Xho
T5854 2016-2019 CC denotes and
T5853 2014-2015 PRP denotes I
T5852 2009-2013 NNP denotes EcoR
T5851 2004-2008 IN denotes with
T5850 1995-2003 VBN denotes digested
T5849 1990-1994 VBD denotes were
T5848 1981-1989 NNS denotes products
T5847 1977-1980 NN denotes PCR
T5846 1965-1976 JJ denotes Recombinant
T5845 1963-1964 . denotes .
T5844 1959-1963 NN denotes case
T5843 1954-1958 DT denotes each
T5842 1951-1953 IN denotes in
T5841 1942-1950 NN denotes template
T5840 1938-1941 DT denotes the
T5839 1935-1937 IN denotes as
T5838 1930-1934 VBN denotes used
T5837 1926-1929 VBD denotes was
T5836 1916-1925 NN denotes pGLmP-539
T5835 1914-1915 . denotes .
T5834 1913-1914 -RRB- denotes )
T5833 1906-1913 NNP denotes Promega
T5832 1905-1906 -LRB- denotes (
T5831 1895-1904 NNP denotes GLprimer2
T5830 1891-1894 CC denotes and
T5829 1889-1890 -RRB- denotes )
T5828 1882-1889 NNP denotes Promega
T5827 1881-1882 -LRB- denotes (
T5826 1871-1880 JJ denotes RVprimer3
T5825 1866-1870 VBD denotes were
T5824 1858-1865 NNS denotes primers
T5823 1854-1857 NNP denotes PCR
T5822 1838-1853 NN denotes oligonucleotide
T5821 1829-1837 NN denotes flanking
T5820 1825-1828 DT denotes The
T5819 1823-1824 . denotes .
T5818 1822-1823 NNP denotes ]
T5817 1820-1822 CD denotes 37
T5816 1819-1820 NNP denotes [
T5815 1808-1818 RB denotes previously
T5814 1799-1807 VBN denotes reported
T5813 1794-1798 VBD denotes were
T5812 1778-1793 NN denotes pGLmP-539mAP-1b
T5811 1774-1777 CC denotes and
T5810 1772-1773 , denotes ,
T5809 1757-1772 NN denotes pGLmP-539mAP-1a
T5808 1755-1756 , denotes ,
T5807 1742-1755 NN denotes pGLmP-539mCRE
T5806 1740-1741 , denotes ,
T5805 1733-1740 NNS denotes mutants
T5804 1724-1732 VB denotes generate
T5803 1721-1723 TO denotes to
T5802 1716-1720 VBD denotes used
T5801 1708-1715 NNS denotes primers
T5800 1704-1707 NNP denotes PCR
T5799 1688-1703 NN denotes oligonucleotide
T5798 1684-1687 DT denotes The
T5797 1682-1683 . denotes .
T5796 1671-1682 NNS denotes mPAI2mCEBPb
T5795 1667-1670 CC denotes and
T5794 1655-1666 NNS denotes mPAI2mCEBPa
T5793 1653-1654 : denotes :
T5792 1650-1653 NNP denotes EBP
T5791 1649-1650 NNP denotes /
T5790 1638-1649 NNP denotes pGLmP-539mC
T5789 1636-1637 : denotes ;
T5788 1624-1636 NN denotes mPAI2mOct-2b
T5787 1620-1623 CC denotes and
T5786 1607-1619 NN denotes mPAI2mOct-2a
T5707 1159-1169 NNP denotes Luciferase
T5706 1157-1158 . denotes .
T5705 1156-1157 -RRB- denotes )
T5704 1149-1156 NNP denotes Promega
T5703 1148-1149 -LRB- denotes (
T5702 1142-1147 JJ denotes Basic
T5701 1137-1141 JJ denotes pGL3
T5700 1133-1136 VBD denotes was
T5699 1126-1132 NN denotes vector
T5698 1120-1125 JJ denotes empty
T5697 1112-1119 NN denotes control
T5696 1108-1111 DT denotes The
T5695 1106-1107 . denotes .
T5694 1098-1106 NNP denotes pGLmP-87
T5693 1090-1097 VB denotes produce
T5692 1087-1089 TO denotes to
T5691 1081-1086 JJ denotes Basic
T5690 1076-1080 JJ denotes pGL3
T5689 1073-1075 IN denotes of
T5688 1067-1072 NNS denotes sites
T5687 1055-1066 NN denotes restriction
T5686 1044-1054 VBP denotes polylinker
T5685 1042-1043 PRP denotes I
T5684 1036-1041 NNP denotes I/Xho
T5683 1032-1035 NNP denotes Kpn
T5682 1028-1031 DT denotes the
T5681 1023-1027 IN denotes into
T5680 1019-1022 CD denotes +92
T5679 1016-1018 TO denotes to
T5678 1013-1015 CD denotes 87
T5677 1012-1013 VBP denotes −
T5676 1004-1011 NNS denotes regions
T5675 995-1003 NN denotes promoter
T5674 986-994 NNP denotes SerpinB2
T5673 979-985 NN denotes murine
T5672 975-978 DT denotes the
T5671 966-974 VB denotes subclone
T5670 963-965 TO denotes to
T5669 958-962 VBN denotes used
T5668 953-957 VBD denotes were
T5667 949-952 NNP denotes LUC
T5666 945-948 NNP denotes DW3
T5665 941-944 CC denotes and
T5664 934-940 NNP denotes BSPCR2
T5663 926-933 NNS denotes primers
T5662 922-925 NNP denotes PCR
T5661 918-921 DT denotes The
T5660 916-917 . denotes .
T5659 910-916 NN denotes ligase
T5658 906-909 NNP denotes DNA
T5657 903-905 CD denotes T4
T5656 898-902 IN denotes with
T5655 893-897 VBZ denotes ends
T5654 886-892 NN denotes vector
T5653 882-885 DT denotes the
T5652 870-881 VBG denotes re-ligating
T5651 866-869 CC denotes and
T5650 864-865 -RRB- denotes )
T5649 861-864 NNP denotes NEB
T5648 860-861 -LRB- denotes (
T5647 849-859 NN denotes polymerase
T5646 845-848 NNP denotes DNA
T5645 842-844 CD denotes T4
T5644 837-841 IN denotes with
T5643 827-836 NNS denotes overhangs
T5642 825-826 NN denotes ′
T5641 824-825 CD denotes 3
T5640 821-823 CC denotes or
T5639 819-820 NN denotes ′
T5638 818-819 CD denotes 5
T5637 808-817 JJ denotes resultant
T5636 804-807 DT denotes the
T5635 797-803 VBG denotes ending
T5634 791-796 JJ denotes blunt
T5633 789-790 , denotes ,
T5632 788-789 -RRB- denotes )
T5631 776-788 RB denotes respectively
T5630 774-775 PRP denotes I
T5629 770-773 NNP denotes Apo
T5628 766-769 CC denotes and
T5627 762-765 NNP denotes III
T5626 758-761 NNP denotes Hae
T5625 756-757 , denotes ,
T5624 755-756 PRP denotes I
T5623 751-754 NNP denotes Pac
T5622 749-750 , denotes ,
T5621 748-749 PRP denotes I
T5620 742-747 NNP denotes Bsu36
T5619 740-741 , denotes ,
T5618 739-740 PRP denotes I
T5617 734-738 NNP denotes BstX
T5616 732-733 , denotes ,
T5615 731-732 PRP denotes I
T5614 727-730 NNP denotes Apa
T5613 725-726 , denotes ,
T5612 724-725 PRP denotes I
T5611 720-723 FW denotes Sfi
T5610 719-720 -LRB- denotes (
T5609 712-718 NN denotes enzyme
T5608 700-711 NN denotes restriction
T5607 693-699 JJ denotes second
T5606 691-692 DT denotes a
T5605 687-690 CC denotes and
T5604 685-686 PRP denotes I
T5603 680-684 NNP denotes EcoR
T5602 675-679 IN denotes with
T5601 664-674 NN denotes pGLmP-3261
T5600 654-663 VBG denotes digesting
T5599 651-653 IN denotes by
T5598 641-650 VBN denotes generated
T5597 636-640 VBD denotes were
T5596 634-635 -RRB- denotes )
T5595 625-634 NN denotes pGLmP-189
T5594 621-624 CC denotes and
T5593 611-620 NN denotes pGLmP-539
T5592 609-610 , denotes ,
T5591 600-609 NN denotes pGLmP-694
T5590 598-599 , denotes ,
T5589 588-598 NN denotes pGLmP-1341
T5588 586-587 , denotes ,
T5587 576-586 NN denotes pGLmP-1686
T5586 574-575 , denotes ,
T5585 564-574 NN denotes pGLmP-2614
T5584 562-563 , denotes ,
T5583 552-562 NN denotes pGLmP-2751
T5582 551-552 -LRB- denotes (
T5581 540-550 NNS denotes constructs
T5580 531-539 NN denotes reporter
T5579 520-530 NN denotes luciferase
T5578 511-519 NNP denotes SerpinB2
T5577 504-510 NN denotes murine
T5576 493-503 JJ denotes Additional
T5575 491-492 . denotes .
T5574 481-491 NN denotes pGLmP-4480
T5573 473-480 VB denotes produce
T5572 470-472 TO denotes to
T5571 459-469 NN denotes pGLmP-3261
T5570 456-458 IN denotes of
T5569 454-455 -RRB- denotes )
T5568 450-454 CD denotes 3261
T5567 449-450 FW denotes −
T5566 448-449 -LRB- denotes (
T5565 443-447 NN denotes site
T5564 441-442 PRP denotes I
T5563 436-440 NNP denotes EcoR
T5562 427-435 NN denotes promoter
T5561 418-426 NNP denotes SerpinB2
T5560 414-417 DT denotes the
T5559 411-413 IN denotes of
T5558 402-410 RB denotes upstream
T5557 390-401 RB denotes immediately
T5556 379-389 JJ denotes sub-cloned
T5555 375-378 VBD denotes was
T5554 364-374 NN denotes pDB9402-42
T5553 361-363 IN denotes of
T5552 354-360 VBP denotes insert
T5551 352-353 PRP denotes I
T5550 347-351 NNP denotes EcoR
T5549 343-346 DT denotes The
T5548 341-342 . denotes .
T5547 331-341 NN denotes pGLmP-3261
T5546 323-330 VB denotes produce
T5545 320-322 TO denotes to
T5544 318-319 -RRB- denotes )
T5543 311-318 NNP denotes Promega
T5542 310-311 -LRB- denotes (
T5541 304-309 NNP denotes Basic
T5540 299-303 NNP denotes pGL3
T5539 296-298 IN denotes of
T5538 290-295 NNS denotes sites
T5537 278-289 NN denotes restriction
T5536 267-277 VBP denotes polylinker
T5535 265-266 PRP denotes I
T5534 259-264 NNP denotes I/Xho
T5533 255-258 NNP denotes Kpn
T5532 251-254 DT denotes the
T5531 246-250 IN denotes into
T5530 238-245 NNP denotes pDB9406
T5529 233-237 IN denotes from
T5528 231-232 -RRB- denotes )
T5527 228-231 CD denotes +92
T5526 225-227 TO denotes to
T5525 220-224 CD denotes 3261
T5524 219-220 FW denotes −
T5523 218-219 -LRB- denotes (
T5522 209-217 NN denotes promoter
T5521 200-208 NNP denotes SerpinB2
T5520 196-199 DT denotes the
T5519 190-195 VB denotes clone
T5518 186-189 CC denotes and
T5517 178-185 VB denotes amplify
T5516 174-177 NNP denotes PCR
T5515 171-173 TO denotes to
T5514 166-170 VBN denotes used
T5513 161-165 VBD denotes were
T5512 159-160 , denotes ,
T5511 155-159 NN denotes site
T5510 143-154 NN denotes restriction
T5509 141-142 PRP denotes I
T5508 137-140 NNP denotes Xho
T5507 134-136 DT denotes an
T5506 123-133 VBG denotes containing
T5505 121-122 , denotes ,
T5504 118-121 NNP denotes LUC
T5503 114-117 NNP denotes DW3
T5502 110-113 CC denotes and
T5501 108-109 , denotes ,
T5500 104-108 NN denotes site
T5499 92-103 NN denotes restriction
T5498 90-91 PRP denotes I
T5497 86-89 NNP denotes Kpn
T5496 84-85 DT denotes a
T5495 73-83 VBG denotes containing
T5494 71-72 , denotes ,
T5493 68-71 NNP denotes LUC
T5492 64-67 NNP denotes DW5
T5485 16-24 NNP denotes SerpinB2
T5484 13-15 IN denotes of
T5483 0-12 NN denotes Construction
T5785 1605-1606 : denotes :
T5784 1592-1605 NN denotes pGLmP-539mOct
T5783 1590-1591 : denotes ;
T5782 1589-1590 NN denotes b
T5781 1587-1589 CD denotes .1
T5780 1579-1587 NNP denotes mPAI2mPU
T5779 1575-1578 CC denotes and
T5778 1573-1574 DT denotes a
T5777 1571-1573 CD denotes .1
T5776 1563-1571 JJ denotes mPAI2mPU
T5775 1561-1562 : denotes :
T5774 1559-1561 CD denotes .1
T5773 1547-1559 NNP denotes pGLmP-539mPU
T5772 1545-1546 : denotes ;
T5771 1534-1545 NNP denotes mPAI2mEboxb
T5770 1530-1533 CC denotes and
T5769 1518-1529 NNS denotes mPAI2mEboxa
T5768 1516-1517 : denotes :
T5767 1502-1516 NN denotes pGLmP-539mEbox
T5766 1500-1501 : denotes :
T5765 1493-1500 VBZ denotes follows
T5764 1490-1492 IN denotes as
T5763 1485-1489 VBN denotes used
T5762 1480-1484 VBD denotes were
T5761 1476-1479 CC denotes and
T5760 1474-1475 , denotes ,
T5759 1472-1474 CD denotes S1
T5758 1470-1471 . denotes .
T5757 1467-1470 NNP denotes Fig
T5756 1464-1466 IN denotes in
T5755 1455-1463 VBN denotes provided
T5754 1451-1454 VBP denotes are
T5753 1441-1450 NNS denotes sequences
T5752 1434-1440 NN denotes primer
T5751 1430-1433 NNP denotes PCR
T5750 1414-1429 NN denotes oligonucleotide
T5749 1407-1413 JJ denotes mutant
T5748 1403-1406 DT denotes The
T5747 1401-1402 . denotes .
T5746 1400-1401 NNP denotes ]
T5745 1398-1400 CD denotes 36
T5744 1397-1398 NNP denotes [
T5743 1387-1396 VBN denotes described
T5742 1384-1386 IN denotes as
T5741 1374-1383 VBN denotes generated
T5740 1369-1373 VBD denotes were
T5739 1367-1368 -RRB- denotes )
T5738 1355-1367 RB denotes respectively
T5737 1351-1354 NNP denotes EBP
T5736 1350-1351 NN denotes /
T5735 1339-1350 JJ denotes pGLmP-539mC
T5734 1335-1338 CC denotes and
T5733 1321-1334 JJ denotes pGLmP-539mOct
T5732 1319-1320 , denotes ,
T5731 1317-1319 CD denotes .1
T5730 1305-1317 NNP denotes pGLmP-539mPU
T5729 1303-1304 , denotes ,
T5728 1289-1303 NNP denotes pGLmP-539mEbox
T5727 1288-1289 -LRB- denotes (
T5726 1282-1287 NNP denotes C/EBP
T5725 1278-1281 CC denotes and
T5724 1272-1277 NN denotes Oct-1
T5723 1270-1271 , denotes ,
T5722 1268-1270 CD denotes .1
T5721 1266-1268 NNP denotes PU
T5720 1264-1265 , denotes ,
T5719 1261-1264 NN denotes box
T5718 1259-1260 NNP denotes E
T5717 1251-1258 NNS denotes regions
T5716 1236-1250 JJ denotes LPS-responsive
T5715 1227-1235 NN denotes promoter
T5714 1218-1226 NNP denotes SerpinB2
T5713 1214-1217 DT denotes the
T5712 1211-1213 IN denotes in
T5711 1201-1210 NNS denotes mutations
T5710 1190-1200 VBG denotes containing
T5709 1179-1189 VBZ denotes constructs
T5708 1170-1178 NN denotes reporter
T5491 56-63 VBZ denotes primers
T5490 52-55 NNP denotes PCR
T5489 48-51 NNP denotes The
T5488 39-47 NNP denotes Plasmids
T5487 34-38 NNP denotes Gene
T5486 25-33 NNP denotes Reporter
R3844 T5483 T5483 ROOT Construction,Construction
R3845 T5484 T5483 prep of,Construction
R3846 T5485 T5486 compound SerpinB2,Reporter
R3847 T5486 T5488 compound Reporter,Plasmids
R3848 T5487 T5488 compound Gene,Plasmids
R3849 T5488 T5484 pobj Plasmids,of
R3850 T5489 T5490 det The,PCR
R3851 T5490 T5491 nsubj PCR,primers
R3852 T5491 T5491 ROOT primers,primers
R3853 T5492 T5493 poss DW5,LUC
R3854 T5493 T5491 dobj LUC,primers
R3855 T5494 T5491 punct ",",primers
R3856 T5495 T5491 advcl containing,primers
R3857 T5496 T5497 det a,Kpn
R3858 T5497 T5500 compound Kpn,site
R3859 T5498 T5500 compound I,site
R3860 T5499 T5500 compound restriction,site
R3861 T5500 T5495 dobj site,containing
R3862 T5501 T5491 punct ",",primers
R3863 T5502 T5491 cc and,primers
R3864 T5503 T5504 poss DW3,LUC
R3865 T5504 T5514 nsubj LUC,used
R3866 T5505 T5514 punct ",",used
R3867 T5506 T5514 advcl containing,used
R3868 T5507 T5508 det an,Xho
R3869 T5508 T5511 compound Xho,site
R3870 T5509 T5511 compound I,site
R3871 T5510 T5511 compound restriction,site
R3872 T5511 T5506 dobj site,containing
R3873 T5512 T5514 punct ",",used
R3874 T5513 T5514 auxpass were,used
R3875 T5514 T5491 conj used,primers
R3876 T5515 T5517 aux to,amplify
R3877 T5516 T5517 nsubj PCR,amplify
R3878 T5517 T5514 xcomp amplify,used
R3879 T5518 T5517 cc and,amplify
R3880 T5519 T5517 conj clone,amplify
R3881 T5520 T5522 det the,promoter
R3882 T5521 T5522 compound SerpinB2,promoter
R3883 T5522 T5519 dobj promoter,clone
R3884 T5523 T5522 punct (,promoter
R3885 T5524 T5522 appos −,promoter
R3886 T5525 T5522 appos 3261,promoter
R3887 T5526 T5525 prep to,3261
R3888 T5527 T5526 pobj +92,to
R3889 T5528 T5525 punct ),3261
R3890 T5529 T5519 prep from,clone
R3891 T5530 T5529 pobj pDB9406,from
R3892 T5531 T5519 prep into,clone
R3893 T5532 T5534 det the,I/Xho
R3894 T5533 T5534 compound Kpn,I/Xho
R3895 T5534 T5531 pobj I/Xho,into
R3896 T5535 T5536 nsubj I,polylinker
R3897 T5536 T5514 conj polylinker,used
R3898 T5537 T5538 compound restriction,sites
R3899 T5538 T5536 dobj sites,polylinker
R3900 T5539 T5538 prep of,sites
R3901 T5540 T5541 compound pGL3,Basic
R3902 T5541 T5539 pobj Basic,of
R3903 T5542 T5541 punct (,Basic
R3904 T5543 T5541 appos Promega,Basic
R3905 T5544 T5541 punct ),Basic
R3906 T5545 T5546 aux to,produce
R3907 T5546 T5536 advcl produce,polylinker
R3908 T5547 T5546 dobj pGLmP-3261,produce
R3909 T5548 T5536 punct .,polylinker
R3910 T5549 T5550 det The,EcoR
R3911 T5550 T5555 nsubj EcoR,was
R3912 T5551 T5552 nsubj I,insert
R3913 T5552 T5550 relcl insert,EcoR
R3914 T5553 T5552 prep of,insert
R3915 T5554 T5553 pobj pDB9402-42,of
R3916 T5555 T5555 ROOT was,was
R3917 T5556 T5555 acomp sub-cloned,was
R3918 T5557 T5558 advmod immediately,upstream
R3919 T5558 T5555 prep upstream,was
R3920 T5559 T5558 prep of,upstream
R3921 T5560 T5562 det the,promoter
R3922 T5561 T5562 compound SerpinB2,promoter
R3923 T5562 T5565 compound promoter,site
R3924 T5563 T5565 compound EcoR,site
R3925 T5564 T5565 compound I,site
R3926 T5565 T5559 pobj site,of
R3927 T5566 T5567 punct (,−
R3928 T5567 T5568 nmod −,3261
R3929 T5568 T5565 appos 3261,site
R3930 T5569 T5565 punct ),site
R3931 T5570 T5565 prep of,site
R3932 T5571 T5570 pobj pGLmP-3261,of
R3933 T5572 T5573 aux to,produce
R3934 T5573 T5555 advcl produce,was
R3935 T5574 T5573 dobj pGLmP-4480,produce
R3936 T5575 T5555 punct .,was
R3937 T5576 T5581 amod Additional,constructs
R3938 T5577 T5580 amod murine,reporter
R3939 T5578 T5580 compound SerpinB2,reporter
R3940 T5579 T5580 compound luciferase,reporter
R3941 T5580 T5581 compound reporter,constructs
R3942 T5581 T5598 nsubjpass constructs,generated
R3943 T5582 T5581 punct (,constructs
R3944 T5583 T5581 appos pGLmP-2751,constructs
R3945 T5584 T5583 punct ",",pGLmP-2751
R3946 T5585 T5583 conj pGLmP-2614,pGLmP-2751
R3947 T5586 T5585 punct ",",pGLmP-2614
R3948 T5587 T5585 conj pGLmP-1686,pGLmP-2614
R3949 T5588 T5587 punct ",",pGLmP-1686
R3950 T5589 T5587 conj pGLmP-1341,pGLmP-1686
R3951 T5590 T5589 punct ",",pGLmP-1341
R3952 T5591 T5589 conj pGLmP-694,pGLmP-1341
R3953 T5592 T5591 punct ",",pGLmP-694
R3954 T5593 T5591 conj pGLmP-539,pGLmP-694
R3955 T5594 T5593 cc and,pGLmP-539
R3956 T5595 T5593 conj pGLmP-189,pGLmP-539
R3957 T5596 T5581 punct ),constructs
R3958 T5597 T5598 auxpass were,generated
R3959 T5598 T5598 ROOT generated,generated
R3960 T5599 T5598 prep by,generated
R3961 T5600 T5599 pcomp digesting,by
R3962 T5601 T5600 dobj pGLmP-3261,digesting
R3963 T5602 T5600 prep with,digesting
R3964 T5603 T5602 pobj EcoR,with
R3965 T5604 T5614 dep I,Apa
R3966 T5605 T5604 cc and,I
R3967 T5606 T5609 det a,enzyme
R3968 T5607 T5608 amod second,restriction
R3969 T5608 T5609 compound restriction,enzyme
R3970 T5609 T5604 conj enzyme,I
R3971 T5610 T5609 punct (,enzyme
R3972 T5611 T5609 parataxis Sfi,enzyme
R3973 T5612 T5614 nsubj I,Apa
R3974 T5613 T5614 punct ",",Apa
R3975 T5614 T5614 ROOT Apa,Apa
R3976 T5615 T5617 nsubj I,BstX
R3977 T5616 T5615 punct ",",I
R3978 T5617 T5617 ROOT BstX,BstX
R3979 T5618 T5620 nsubj I,Bsu36
R3980 T5619 T5618 punct ",",I
R3981 T5620 T5620 ROOT Bsu36,Bsu36
R3982 T5621 T5623 nsubj I,Pac
R3983 T5622 T5621 punct ",",I
R3984 T5623 T5623 ROOT Pac,Pac
R3985 T5624 T5624 ROOT I,I
R3986 T5625 T5624 punct ",",I
R3987 T5626 T5627 compound Hae,III
R3988 T5627 T5624 appos III,I
R3989 T5628 T5627 cc and,III
R3990 T5629 T5627 conj Apo,III
R3991 T5630 T5624 appos I,I
R3992 T5631 T5624 appos respectively,I
R3993 T5632 T5624 punct ),I
R3994 T5633 T5652 punct ",",re-ligating
R3995 T5634 T5652 dep blunt,re-ligating
R3996 T5635 T5634 acl ending,blunt
R3997 T5636 T5639 det the,′
R3998 T5637 T5639 amod resultant,′
R3999 T5638 T5639 nummod 5,′
R4000 T5639 T5635 dobj ′,ending
R4001 T5640 T5639 cc or,′
R4002 T5641 T5642 nummod 3,′
R4003 T5642 T5643 compound ′,overhangs
R4004 T5643 T5639 conj overhangs,′
R4005 T5644 T5643 prep with,overhangs
R4006 T5645 T5647 amod T4,polymerase
R4007 T5646 T5647 compound DNA,polymerase
R4008 T5647 T5644 pobj polymerase,with
R4009 T5648 T5647 punct (,polymerase
R4010 T5649 T5647 appos NEB,polymerase
R4011 T5650 T5647 punct ),polymerase
R4012 T5651 T5643 cc and,overhangs
R4013 T5652 T5652 ROOT re-ligating,re-ligating
R4014 T5653 T5654 det the,vector
R4015 T5654 T5652 dobj vector,re-ligating
R4016 T5655 T5652 dep ends,re-ligating
R4017 T5656 T5655 prep with,ends
R4018 T5657 T5659 amod T4,ligase
R4019 T5658 T5659 compound DNA,ligase
R4020 T5659 T5656 pobj ligase,with
R4021 T5660 T5652 punct .,re-ligating
R4022 T5661 T5663 det The,primers
R4023 T5662 T5663 compound PCR,primers
R4024 T5663 T5669 nsubjpass primers,used
R4025 T5664 T5663 appos BSPCR2,primers
R4026 T5665 T5664 cc and,BSPCR2
R4027 T5666 T5667 poss DW3,LUC
R4028 T5667 T5664 conj LUC,BSPCR2
R4029 T5668 T5669 auxpass were,used
R4030 T5669 T5669 ROOT used,used
R4031 T5670 T5671 aux to,subclone
R4032 T5671 T5669 xcomp subclone,used
R4033 T5672 T5676 det the,regions
R4034 T5673 T5676 amod murine,regions
R4035 T5674 T5675 compound SerpinB2,promoter
R4036 T5675 T5676 compound promoter,regions
R4037 T5676 T5671 dobj regions,subclone
R4038 T5677 T5671 conj −,subclone
R4039 T5678 T5680 quantmod 87,+92
R4040 T5679 T5680 quantmod to,+92
R4041 T5680 T5677 dobj +92,−
R4042 T5681 T5677 prep into,−
R4043 T5682 T5684 det the,I/Xho
R4044 T5683 T5684 compound Kpn,I/Xho
R4045 T5684 T5681 pobj I/Xho,into
R4046 T5685 T5686 nsubj I,polylinker
R4047 T5686 T5669 conj polylinker,used
R4048 T5687 T5688 compound restriction,sites
R4049 T5688 T5686 dobj sites,polylinker
R4050 T5689 T5688 prep of,sites
R4051 T5690 T5691 amod pGL3,Basic
R4052 T5691 T5689 pobj Basic,of
R4053 T5692 T5693 aux to,produce
R4054 T5693 T5686 advcl produce,polylinker
R4055 T5694 T5693 dobj pGLmP-87,produce
R4056 T5695 T5686 punct .,polylinker
R4057 T5696 T5699 det The,vector
R4058 T5697 T5699 nmod control,vector
R4059 T5698 T5699 amod empty,vector
R4060 T5699 T5700 nsubj vector,was
R4061 T5700 T5700 ROOT was,was
R4062 T5701 T5702 amod pGL3,Basic
R4063 T5702 T5700 attr Basic,was
R4064 T5703 T5704 punct (,Promega
R4065 T5704 T5702 appos Promega,Basic
R4066 T5705 T5704 punct ),Promega
R4067 T5706 T5700 punct .,was
R4068 T5707 T5708 compound Luciferase,reporter
R4069 T5708 T5709 nsubj reporter,constructs
R4070 T5709 T5709 ROOT constructs,constructs
R4071 T5710 T5710 ROOT containing,containing
R4072 T5711 T5710 dobj mutations,containing
R4073 T5712 T5711 prep in,mutations
R4074 T5713 T5715 det the,promoter
R4075 T5714 T5715 compound SerpinB2,promoter
R4076 T5715 T5719 compound promoter,box
R4077 T5716 T5717 amod LPS-responsive,regions
R4078 T5717 T5719 compound regions,box
R4079 T5718 T5719 compound E,box
R4080 T5719 T5712 pobj box,in
R4081 T5720 T5710 punct ",",containing
R4082 T5721 T5722 compound PU,.1
R4083 T5722 T5724 nummod .1,Oct-1
R4084 T5723 T5722 punct ",",.1
R4085 T5724 T5710 appos Oct-1,containing
R4086 T5725 T5724 cc and,Oct-1
R4087 T5726 T5724 conj C/EBP,Oct-1
R4088 T5727 T5728 punct (,pGLmP-539mEbox
R4089 T5728 T5726 appos pGLmP-539mEbox,C/EBP
R4090 T5729 T5728 punct ",",pGLmP-539mEbox
R4091 T5730 T5726 conj pGLmP-539mPU,C/EBP
R4092 T5731 T5730 nummod .1,pGLmP-539mPU
R4093 T5732 T5730 punct ",",pGLmP-539mPU
R4094 T5733 T5730 conj pGLmP-539mOct,pGLmP-539mPU
R4095 T5734 T5733 cc and,pGLmP-539mOct
R4096 T5735 T5733 conj pGLmP-539mC,pGLmP-539mOct
R4097 T5736 T5737 compound /,EBP
R4098 T5737 T5741 nsubjpass EBP,generated
R4099 T5738 T5737 advmod respectively,EBP
R4100 T5739 T5741 punct ),generated
R4101 T5740 T5741 auxpass were,generated
R4102 T5741 T5709 ccomp generated,constructs
R4103 T5742 T5743 mark as,described
R4104 T5743 T5741 advcl described,generated
R4105 T5744 T5746 nmod [,]
R4106 T5745 T5746 nummod 36,]
R4107 T5746 T5743 dobj ],described
R4108 T5747 T5709 punct .,constructs
R4109 T5748 T5753 det The,sequences
R4110 T5749 T5753 amod mutant,sequences
R4111 T5750 T5753 compound oligonucleotide,sequences
R4112 T5751 T5752 compound PCR,primer
R4113 T5752 T5753 compound primer,sequences
R4114 T5753 T5755 nsubjpass sequences,provided
R4115 T5754 T5755 auxpass are,provided
R4116 T5755 T5755 ROOT provided,provided
R4117 T5756 T5755 prep in,provided
R4118 T5757 T5756 pobj Fig,in
R4119 T5758 T5755 punct .,provided
R4120 T5759 T5763 nsubjpass S1,used
R4121 T5760 T5759 punct ",",S1
R4122 T5761 T5759 cc and,S1
R4123 T5762 T5763 auxpass were,used
R4124 T5763 T5763 ROOT used,used
R4125 T5764 T5765 mark as,follows
R4126 T5765 T5763 advcl follows,used
R4127 T5766 T5767 punct :,pGLmP-539mEbox
R4128 T5767 T5767 ROOT pGLmP-539mEbox,pGLmP-539mEbox
R4129 T5768 T5767 punct :,pGLmP-539mEbox
R4130 T5769 T5767 appos mPAI2mEboxa,pGLmP-539mEbox
R4131 T5770 T5769 cc and,mPAI2mEboxa
R4132 T5771 T5769 conj mPAI2mEboxb,mPAI2mEboxa
R4133 T5772 T5767 punct ;,pGLmP-539mEbox
R4134 T5773 T5767 conj pGLmP-539mPU,pGLmP-539mEbox
R4135 T5774 T5773 nummod .1,pGLmP-539mPU
R4136 T5775 T5777 punct :,.1
R4137 T5776 T5777 compound mPAI2mPU,.1
R4138 T5777 T5767 appos .1,pGLmP-539mEbox
R4139 T5778 T5782 det a,b
R4140 T5779 T5778 cc and,a
R4141 T5780 T5782 nmod mPAI2mPU,b
R4142 T5781 T5782 nummod .1,b
R4143 T5782 T5777 appos b,.1
R4144 T5783 T5784 punct ;,pGLmP-539mOct
R4145 T5784 T5767 appos pGLmP-539mOct,pGLmP-539mEbox
R4146 T5785 T5784 punct :,pGLmP-539mOct
R4147 T5786 T5784 appos mPAI2mOct-2a,pGLmP-539mOct
R4148 T5787 T5786 cc and,mPAI2mOct-2a
R4149 T5788 T5786 conj mPAI2mOct-2b,mPAI2mOct-2a
R4150 T5789 T5792 punct ;,EBP
R4151 T5790 T5792 compound pGLmP-539mC,EBP
R4152 T5791 T5792 compound /,EBP
R4153 T5792 T5784 conj EBP,pGLmP-539mOct
R4154 T5793 T5792 punct :,EBP
R4155 T5794 T5792 appos mPAI2mCEBPa,EBP
R4156 T5795 T5794 cc and,mPAI2mCEBPa
R4157 T5796 T5794 conj mPAI2mCEBPb,mPAI2mCEBPa
R4158 T5797 T5792 punct .,EBP
R4159 T5798 T5801 det The,primers
R4160 T5799 T5801 compound oligonucleotide,primers
R4161 T5800 T5801 compound PCR,primers
R4162 T5801 T5802 nsubj primers,used
R4163 T5802 T5802 ROOT used,used
R4164 T5803 T5804 aux to,generate
R4165 T5804 T5802 xcomp generate,used
R4166 T5805 T5804 dobj mutants,generate
R4167 T5806 T5805 punct ",",mutants
R4168 T5807 T5805 appos pGLmP-539mCRE,mutants
R4169 T5808 T5807 punct ",",pGLmP-539mCRE
R4170 T5809 T5807 conj pGLmP-539mAP-1a,pGLmP-539mCRE
R4171 T5810 T5809 punct ",",pGLmP-539mAP-1a
R4172 T5811 T5809 cc and,pGLmP-539mAP-1a
R4173 T5812 T5809 conj pGLmP-539mAP-1b,pGLmP-539mAP-1a
R4174 T5813 T5814 auxpass were,reported
R4175 T5814 T5802 conj reported,used
R4176 T5815 T5814 advmod previously,reported
R4177 T5816 T5818 nmod [,]
R4178 T5817 T5818 nummod 37,]
R4179 T5818 T5814 dobj ],reported
R4180 T5819 T5802 punct .,used
R4181 T5820 T5824 det The,primers
R4182 T5821 T5824 amod flanking,primers
R4183 T5822 T5823 compound oligonucleotide,PCR
R4184 T5823 T5824 compound PCR,primers
R4185 T5824 T5825 nsubj primers,were
R4186 T5825 T5825 ROOT were,were
R4187 T5826 T5825 acomp RVprimer3,were
R4188 T5827 T5828 punct (,Promega
R4189 T5828 T5826 appos Promega,RVprimer3
R4190 T5829 T5828 punct ),Promega
R4191 T5830 T5826 cc and,RVprimer3
R4192 T5831 T5826 conj GLprimer2,RVprimer3
R4193 T5832 T5831 punct (,GLprimer2
R4194 T5833 T5831 appos Promega,GLprimer2
R4195 T5834 T5831 punct ),GLprimer2
R4196 T5835 T5825 punct .,were
R4197 T5836 T5838 nsubjpass pGLmP-539,used
R4198 T5837 T5838 auxpass was,used
R4199 T5838 T5838 ROOT used,used
R4200 T5839 T5838 prep as,used
R4201 T5840 T5841 det the,template
R4202 T5841 T5839 pobj template,as
R4203 T5842 T5838 prep in,used
R4204 T5843 T5844 det each,case
R4205 T5844 T5842 pobj case,in
R4206 T5845 T5838 punct .,used
R4207 T5846 T5848 amod Recombinant,products
R4208 T5847 T5848 compound PCR,products
R4209 T5848 T5850 nsubjpass products,digested
R4210 T5849 T5850 auxpass were,digested
R4211 T5850 T5850 ROOT digested,digested
R4212 T5851 T5850 prep with,digested
R4213 T5852 T5851 pobj EcoR,with
R4214 T5853 T5850 advcl I,digested
R4215 T5854 T5853 cc and,I
R4216 T5855 T5853 conj Xho,I
R4217 T5856 T5853 conj I,I
R4218 T5857 T5856 cc and,I
R4219 T5858 T5856 conj cloned,I
R4220 T5859 T5858 prep between,cloned
R4221 T5860 T5861 det the,EcoR
R4222 T5861 T5859 pobj EcoR,between
R4223 T5862 T5861 nummod I,EcoR
R4224 T5863 T5862 cc and,I
R4225 T5864 T5862 conj Xho,I
R4226 T5865 T5866 nsubj I,restriction
R4227 T5866 T5862 conj restriction,I
R4228 T5867 T5866 dobj sites,restriction
R4229 T5868 T5867 prep of,sites
R4230 T5869 T5868 pobj pGLmP-539,of
R4231 T5870 T5866 prep in,restriction
R4232 T5871 T5870 pobj place,in
R4233 T5872 T5871 prep of,place
R4234 T5873 T5878 det the,region
R4235 T5874 T5878 nmod −,region
R4236 T5875 T5874 nummod 539,−
R4237 T5876 T5878 amod /,region
R4238 T5877 T5878 nummod +92,region
R4239 T5878 T5872 pobj region,of
R4240 T5879 T5878 prep of,region
R4241 T5880 T5884 det the,promoter
R4242 T5881 T5884 amod wild-type,promoter
R4243 T5882 T5883 compound murine,SerpinB2
R4244 T5883 T5884 compound SerpinB2,promoter
R4245 T5884 T5879 pobj promoter,of
R4246 T5885 T5866 punct .,restriction
R4247 T5886 T5887 nsubj Sequence,verified
R4248 T5887 T5887 ROOT verified,verified
R4249 T5888 T5890 nsubjpass constructs,used
R4250 T5889 T5890 auxpass were,used
R4251 T5890 T5887 ccomp used,verified
R4252 T5891 T5890 prep in,used
R4253 T5892 T5893 det the,experiments
R4254 T5893 T5891 pobj experiments,in
R4255 T5894 T5887 punct .,verified

2_test

Id Subject Object Predicate Lexical cue
23472114-2744487-87899174 1398-1400 2744487 denotes 36
T12110 1398-1400 2744487 denotes 36

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5100 1607-1619 NN denotes mPAI2mOct-2a
T5099 1605-1606 -COLON- denotes :
T5098 1592-1605 NN denotes pGLmP-539mOct
T5097 1590-1591 -COLON- denotes ;
T5096 1579-1590 NN denotes mPAI2mPU.1b
T5095 1575-1578 CC denotes and
T5094 1563-1574 NN denotes mPAI2mPU.1a
T5093 1561-1562 -COLON- denotes :
T5092 1547-1561 NN denotes pGLmP-539mPU.1
T5091 1545-1546 -COLON- denotes ;
T5090 1534-1545 NN denotes mPAI2mEboxb
T5089 1530-1533 CC denotes and
T5088 1518-1529 NN denotes mPAI2mEboxa
T5087 1516-1517 -COLON- denotes :
T5086 1502-1516 NN denotes pGLmP-539mEbox
T5085 1500-1501 -COLON- denotes :
T5084 1493-1500 VB denotes follows
T5083 1490-1492 IN denotes as
T5082 1485-1489 VB denotes used
T5081 1480-1484 VB denotes were
T5080 1476-1479 CC denotes and
T5079 1474-1475 -COMMA- denotes ,
T5078 1472-1474 NN denotes S1
T5077 1467-1471 NNP denotes Fig.
T5076 1464-1466 IN denotes in
T5075 1455-1463 VB denotes provided
T5074 1451-1454 VB denotes are
T5073 1441-1450 NN denotes sequences
T5072 1434-1440 NN denotes primer
T5071 1430-1433 NN denotes PCR
T5070 1414-1429 NN denotes oligonucleotide
T5069 1407-1413 JJ denotes mutant
T5068 1403-1406 DT denotes The
T5067 1400-1401 -RRB- denotes ]
T5066 1398-1400 CD denotes 36
T5065 1397-1398 -LRB- denotes [
T5064 1387-1396 VB denotes described
T5063 1384-1386 IN denotes as
T5062 1374-1383 VB denotes generated
T5061 1369-1373 VB denotes were
T5060 1367-1368 -RRB- denotes )
T5059 1355-1367 RB denotes respectively
T5058 1339-1354 NN denotes pGLmP-539mC/EBP
T5057 1335-1338 CC denotes and
T5056 1321-1334 NN denotes pGLmP-539mOct
T5055 1319-1320 -COMMA- denotes ,
T5054 1305-1319 NN denotes pGLmP-539mPU.1
T5053 1303-1304 -COMMA- denotes ,
T5052 1289-1303 NN denotes pGLmP-539mEbox
T5051 1288-1289 -LRB- denotes (
T5050 1282-1287 NN denotes C/EBP
T5049 1278-1281 CC denotes and
T5048 1272-1277 NN denotes Oct-1
T5047 1270-1271 -COMMA- denotes ,
T5046 1266-1270 NN denotes PU.1
T5045 1264-1265 -COMMA- denotes ,
T5044 1261-1264 NN denotes box
T5043 1259-1260 NN denotes E
T5042 1251-1258 NN denotes regions
T5041 1236-1250 JJ denotes LPS-responsive
T5040 1227-1235 NN denotes promoter
T5039 1218-1226 NN denotes SerpinB2
T5038 1214-1217 DT denotes the
T5037 1211-1213 IN denotes in
T5036 1201-1210 NN denotes mutations
T5035 1190-1200 VB denotes containing
T5034 1179-1189 NN denotes constructs
T5033 1170-1178 NN denotes reporter
T5032 1159-1169 NN denotes Luciferase
T5031 1156-1157 -RRB- denotes )
T5030 1149-1156 NNP denotes Promega
T5029 1148-1149 -LRB- denotes (
T5028 1142-1147 JJ denotes Basic
T5027 1137-1141 NN denotes pGL3
T5026 1133-1136 VB denotes was
T5025 1126-1132 NN denotes vector
T5024 1120-1125 JJ denotes empty
T5023 1112-1119 NN denotes control
T5022 1108-1111 DT denotes The
T5021 1098-1106 NN denotes pGLmP-87
T5020 1090-1097 VB denotes produce
T5019 1087-1089 TO denotes to
T5018 1081-1086 JJ denotes Basic
T5017 1076-1080 NN denotes pGL3
T5016 1073-1075 IN denotes of
T5015 1067-1072 NN denotes sites
T5014 1055-1066 NN denotes restriction
T5013 1044-1054 NN denotes polylinker
T5012 1042-1043 NNP denotes I
T5011 1036-1041 NNP denotes I/Xho
T5010 1032-1035 NNP denotes Kpn
T5009 1028-1031 DT denotes the
T5008 1023-1027 IN denotes into
T5007 1019-1022 CD denotes +92
T5006 1016-1018 TO denotes to
T5005 1012-1015 CD denotes −87
T5004 1004-1011 NN denotes regions
T5003 995-1003 NN denotes promoter
T5002 986-994 NN denotes SerpinB2
T5001 979-985 JJ denotes murine
T5000 975-978 DT denotes the
T4999 966-974 VB denotes subclone
T4998 963-965 TO denotes to
T4997 958-962 VB denotes used
T4996 953-957 VB denotes were
T4995 945-952 NN denotes DW3’LUC
T4994 941-944 CC denotes and
T4993 934-940 NN denotes BSPCR2
T4992 926-933 NN denotes primers
T4991 922-925 NN denotes PCR
T4990 918-921 DT denotes The
T4989 910-916 NN denotes ligase
T4988 906-909 NN denotes DNA
T4987 903-905 NN denotes T4
T4986 898-902 IN denotes with
T4985 893-897 VB denotes ends
T4984 886-892 NN denotes vector
T4983 882-885 DT denotes the
T4982 870-881 VB denotes re-ligating
T4981 866-869 CC denotes and
T4980 864-865 -RRB- denotes )
T4979 861-864 NN denotes NEB
T4978 860-861 -LRB- denotes (
T4977 849-859 NN denotes polymerase
T4976 845-848 NN denotes DNA
T4975 842-844 NN denotes T4
T4974 837-841 IN denotes with
T4973 827-836 NN denotes overhangs
T4972 824-826 CD denotes 3′
T4971 821-823 CC denotes or
T4970 818-820 CD denotes 5′
T4969 808-817 JJ denotes resultant
T4968 804-807 DT denotes the
T4967 797-803 VB denotes ending
T4966 791-796 NN denotes blunt
T4965 789-790 -COMMA- denotes ,
T4964 788-789 -RRB- denotes )
T4963 776-788 RB denotes respectively
T4962 774-775 PRP denotes I
T4961 770-773 NNP denotes Apo
T4960 766-769 CC denotes and
T4959 762-765 NNP denotes III
T4958 758-761 NNP denotes Hae
T4957 756-757 -COMMA- denotes ,
T4956 755-756 NNP denotes I
T4955 751-754 NNP denotes Pac
T4954 749-750 -COMMA- denotes ,
T4953 748-749 NNP denotes I
T4952 742-747 NN denotes Bsu36
T4951 740-741 -COMMA- denotes ,
T4950 739-740 NNP denotes I
T4949 734-738 NNP denotes BstX
T4948 732-733 -COMMA- denotes ,
T4947 731-732 NNP denotes I
T4946 727-730 NNP denotes Apa
T4945 725-726 -COMMA- denotes ,
T4944 724-725 NNP denotes I
T4943 720-723 NNP denotes Sfi
T4942 719-720 -LRB- denotes (
T4941 712-718 NN denotes enzyme
T4940 700-711 NN denotes restriction
T4939 693-699 JJ denotes second
T4938 691-692 DT denotes a
T4937 687-690 CC denotes and
T4936 685-686 CD denotes I
T4935 680-684 NN denotes EcoR
T4934 675-679 IN denotes with
T4933 664-674 NN denotes pGLmP-3261
T4932 654-663 VB denotes digesting
T4931 651-653 IN denotes by
T4930 641-650 VB denotes generated
T4929 636-640 VB denotes were
T4928 634-635 -RRB- denotes )
T4927 625-634 NN denotes pGLmP-189
T4926 621-624 CC denotes and
T4925 611-620 NN denotes pGLmP-539
T4924 609-610 -COMMA- denotes ,
T4923 600-609 NN denotes pGLmP-694
T4922 598-599 -COMMA- denotes ,
T4921 588-598 NN denotes pGLmP-1341
T4920 586-587 -COMMA- denotes ,
T4919 576-586 NN denotes pGLmP-1686
T4918 574-575 -COMMA- denotes ,
T4917 564-574 NN denotes pGLmP-2614
T4916 562-563 -COMMA- denotes ,
T4915 552-562 NN denotes pGLmP-2751
T4914 551-552 -LRB- denotes (
T4913 540-550 NN denotes constructs
T4912 531-539 NN denotes reporter
T4911 520-530 NN denotes luciferase
T4910 511-519 NN denotes SerpinB2
T4909 504-510 JJ denotes murine
T4908 493-503 JJ denotes Additional
T4907 481-491 NN denotes pGLmP-4480
T4906 473-480 VB denotes produce
T4905 470-472 TO denotes to
T4904 459-469 NN denotes pGLmP-3261
T4903 456-458 IN denotes of
T4902 454-455 -RRB- denotes )
T4901 449-454 NN denotes −3261
T4900 448-449 -LRB- denotes (
T4899 443-447 NN denotes site
T4898 441-442 NN denotes I
T4897 436-440 NN denotes EcoR
T4896 427-435 NN denotes promoter
T4895 418-426 NN denotes SerpinB2
T4894 414-417 DT denotes the
T4893 411-413 IN denotes of
T4892 402-410 JJ denotes upstream
T4891 390-401 RB denotes immediately
T4890 379-389 VB denotes sub-cloned
T4889 375-378 VB denotes was
T4888 364-374 NN denotes pDB9402-42
T4887 361-363 IN denotes of
T4886 354-360 NN denotes insert
T4885 352-353 CD denotes I
T4858 209-217 NN denotes promoter
T4857 200-208 NN denotes SerpinB2
T4856 196-199 DT denotes the
T4855 190-195 VB denotes clone
T4854 186-189 CC denotes and
T4853 178-185 VB denotes amplify
T4852 174-177 NN denotes PCR
T4851 171-173 TO denotes to
T4850 166-170 VB denotes used
T4849 161-165 VB denotes were
T4848 159-160 -COMMA- denotes ,
T4847 155-159 NN denotes site
T4846 143-154 NN denotes restriction
T4845 141-142 CD denotes I
T4844 137-140 NN denotes Xho
T4843 134-136 DT denotes an
T4842 123-133 VB denotes containing
T4841 121-122 -COMMA- denotes ,
T4840 114-121 NN denotes DW3’LUC
T4839 110-113 CC denotes and
T4838 108-109 -COMMA- denotes ,
T4837 104-108 NN denotes site
T4836 92-103 NN denotes restriction
T4835 90-91 NN denotes I
T4834 86-89 NN denotes Kpn
T4833 84-85 DT denotes a
T4832 73-83 VB denotes containing
T4831 71-72 -COMMA- denotes ,
T4830 64-71 NN denotes DW5’LUC
T4829 56-63 NN denotes primers
T4828 52-55 NN denotes PCR
T4827 48-51 DT denotes The
T4826 39-47 NN denotes Plasmids
T4825 34-38 NNP denotes Gene
T4824 25-33 NNP denotes Reporter
T4823 16-24 NN denotes SerpinB2
T4822 13-15 IN denotes of
T4821 0-12 NN denotes Construction
T5197 2218-2229 NN denotes experiments
T5196 2214-2217 DT denotes the
T5195 2211-2213 IN denotes in
T5194 2206-2210 VB denotes used
T5193 2201-2205 VB denotes were
T5192 2190-2200 NN denotes constructs
T5191 2181-2189 VB denotes verified
T5190 2172-2180 NN denotes Sequence
T5189 2162-2170 NN denotes promoter
T5188 2153-2161 NN denotes SerpinB2
T5187 2146-2152 JJ denotes murine
T5186 2136-2145 JJ denotes wild-type
T5185 2132-2135 DT denotes the
T5184 2129-2131 IN denotes of
T5183 2122-2128 NN denotes region
T5182 2113-2121 NN denotes −539/+92
T5181 2109-2112 DT denotes the
T5180 2106-2108 IN denotes of
T5179 2100-2105 NN denotes place
T5178 2097-2099 IN denotes in
T5177 2087-2096 NN denotes pGLmP-539
T5176 2084-2086 IN denotes of
T5175 2078-2083 NN denotes sites
T5174 2066-2077 NN denotes restriction
T5173 2064-2065 CD denotes I
T5172 2060-2063 NN denotes Xho
T5171 2056-2059 CC denotes and
T5170 2054-2055 CD denotes I
T5169 2049-2053 NN denotes EcoR
T5168 2045-2048 DT denotes the
T5167 2037-2044 IN denotes between
T5166 2030-2036 VB denotes cloned
T5165 2026-2029 CC denotes and
T5164 2024-2025 NNP denotes I
T5163 2020-2023 NNP denotes Xho
T5162 2016-2019 CC denotes and
T5161 2014-2015 CD denotes I
T5160 2009-2013 NN denotes EcoR
T5159 2004-2008 IN denotes with
T5158 1995-2003 VB denotes digested
T5157 1990-1994 VB denotes were
T5156 1981-1989 NN denotes products
T5155 1977-1980 NN denotes PCR
T5154 1965-1976 JJ denotes Recombinant
T5153 1949-1953 NN denotes e in
T5152 1945-1949 DT denotes plat
T5151 1943-1945 IN denotes em
T5150 1935-1943 NN denotes as the t
T5149 1932-1935 DT denotes ed
T5148 1930-1932 IN denotes us
T5147 1926-1930 VB denotes was
T5146 1923-1926 VB denotes 39
T5145 1914-1923 NN denotes . pGLmP-5
T5144 1913-1914 -RRB- denotes )
T5143 1906-1913 NN denotes Promega
T5142 1905-1906 -LRB- denotes (
T5141 1895-1904 NN denotes GLprimer2
T5140 1891-1894 CC denotes and
T5139 1889-1890 -RRB- denotes )
T5138 1882-1889 NN denotes Promega
T5137 1881-1882 -LRB- denotes (
T5136 1871-1880 NN denotes RVprimer3
T5135 1866-1870 VB denotes were
T5134 1858-1865 NN denotes primers
T5133 1854-1857 NN denotes PCR
T5132 1838-1853 NN denotes oligonucleotide
T5131 1829-1837 NN denotes flanking
T5130 1825-1828 DT denotes The
T5129 1822-1823 -RRB- denotes ]
T5128 1820-1822 CD denotes 37
T5127 1819-1820 -LRB- denotes [
T5126 1808-1818 RB denotes previously
T5125 1799-1807 VB denotes reported
T5124 1794-1798 VB denotes were
T5123 1778-1793 NN denotes pGLmP-539mAP-1b
T5122 1774-1777 CC denotes and
T5121 1772-1773 -COMMA- denotes ,
T5120 1757-1772 NN denotes pGLmP-539mAP-1a
T5119 1755-1756 -COMMA- denotes ,
T5118 1742-1755 NN denotes pGLmP-539mCRE
T5117 1740-1741 -COMMA- denotes ,
T5116 1733-1740 NN denotes mutants
T5115 1724-1732 VB denotes generate
T5114 1721-1723 TO denotes to
T5113 1716-1720 VB denotes used
T5112 1708-1715 NN denotes primers
T5111 1704-1707 NN denotes PCR
T5110 1688-1703 NN denotes oligonucleotide
T5109 1684-1687 DT denotes The
T5108 1671-1682 NN denotes mPAI2mCEBPb
T5107 1667-1670 CC denotes and
T5106 1655-1666 NN denotes mPAI2mCEBPa
T5105 1653-1654 -COLON- denotes :
T5104 1638-1653 NN denotes pGLmP-539mC/EBP
T5103 1636-1637 -COLON- denotes ;
T5102 1624-1636 NN denotes mPAI2mOct-2b
T5101 1620-1623 CC denotes and
T4884 347-351 NN denotes EcoR
T4883 343-346 DT denotes The
T4882 331-341 NN denotes pGLmP-3261
T4881 323-330 VB denotes produce
T4880 320-322 TO denotes to
T4879 318-319 -RRB- denotes )
T4878 311-318 NNP denotes Promega
T4877 310-311 -LRB- denotes (
T4876 304-309 JJ denotes Basic
T4875 299-303 NN denotes pGL3
T4874 296-298 IN denotes of
T4873 290-295 NN denotes sites
T4872 278-289 NN denotes restriction
T4871 267-277 NN denotes polylinker
T4870 265-266 NNP denotes I
T4869 259-264 NNP denotes I/Xho
T4868 255-258 NNP denotes Kpn
T4867 251-254 DT denotes the
T4866 246-250 IN denotes into
T4865 238-245 NN denotes pDB9406
T4864 233-237 IN denotes from
T4863 231-232 -RRB- denotes )
T4862 228-231 CD denotes +92
T4861 225-227 TO denotes to
T4860 219-224 CD denotes −3261
T4859 218-219 -LRB- denotes (
R3450 T4821 T4822 arg1Of Construction,of
R3451 T4825 T4824 arg1Of Gene,Reporter
R3452 T4826 T4822 arg2Of Plasmids,of
R3453 T4826 T4823 arg1Of Plasmids,SerpinB2
R3454 T4826 T4825 arg1Of Plasmids,Gene
R3455 T4829 T4827 arg1Of primers,The
R3456 T4829 T4828 arg1Of primers,PCR
R3457 T4829 T4853 arg1Of primers,amplify
R3458 T4829 T4855 arg1Of primers,clone
R3459 T4830 T4831 arg1Of DW5’LUC,","
R3460 T4830 T4832 arg1Of DW5’LUC,containing
R3461 T4830 T4839 arg1Of DW5’LUC,and
R3462 T4837 T4832 arg2Of site,containing
R3463 T4837 T4833 arg1Of site,a
R3464 T4837 T4834 arg1Of site,Kpn
R3465 T4837 T4835 arg1Of site,I
R3466 T4837 T4836 arg1Of site,restriction
R3467 T4839 T4838 arg1Of and,","
R3468 T4839 T4841 arg1Of and,","
R3469 T4839 T4842 arg1Of and,containing
R3470 T4839 T4849 arg1Of and,were
R3471 T4839 T4850 arg2Of and,used
R3472 T4840 T4839 arg2Of DW3’LUC,and
R3473 T4847 T4842 arg2Of site,containing
R3474 T4847 T4843 arg1Of site,an
R3475 T4847 T4844 arg1Of site,Xho
R3476 T4847 T4845 arg1Of site,I
R3477 T4847 T4846 arg1Of site,restriction
R3478 T4850 T4848 arg1Of used,","
R3479 T4850 T4849 arg2Of used,were
R3480 T4850 T4851 arg1Of used,to
R3481 T4852 T4851 arg2Of PCR,to
R3482 T4853 T4854 arg1Of amplify,and
R3483 T4854 T4849 modOf and,were
R3484 T4854 T4880 modOf and,to
R3485 T4855 T4854 arg2Of clone,and
R3486 T4858 T4853 arg2Of promoter,amplify
R3487 T4858 T4855 arg2Of promoter,clone
R3488 T4858 T4856 arg1Of promoter,the
R3489 T4858 T4857 arg1Of promoter,SerpinB2
R3490 T4858 T4859 arg1Of promoter,(
R3491 T4858 T4864 arg1Of promoter,from
R3492 T4858 T4866 arg1Of promoter,into
R3493 T4862 T4859 arg2Of +92,(
R3494 T4862 T4860 arg1Of +92,−3261
R3495 T4862 T4861 arg1Of +92,to
R3496 T4863 T4859 arg3Of ),(
R3497 T4865 T4864 arg2Of pDB9406,from
R3498 T4870 T4868 arg1Of I,Kpn
R3499 T4870 T4869 arg1Of I,I/Xho
R3500 T4873 T4866 arg2Of sites,into
R3501 T4873 T4867 arg1Of sites,the
R3502 T4873 T4870 arg1Of sites,I
R3503 T4873 T4871 arg1Of sites,polylinker
R3504 T4873 T4872 arg1Of sites,restriction
R3505 T4873 T4874 arg1Of sites,of
R3506 T4876 T4875 arg1Of Basic,pGL3
R3507 T4878 T4874 arg2Of Promega,of
R3508 T4878 T4876 arg1Of Promega,Basic
R3509 T4878 T4877 arg2Of Promega,(
R3510 T4879 T4877 arg3Of ),(
R3511 T4881 T4880 arg1Of produce,to
R3512 T4882 T4881 arg2Of pGLmP-3261,produce
R3513 T4886 T4883 arg1Of insert,The
R3514 T4886 T4884 arg1Of insert,EcoR
R3515 T4886 T4885 arg1Of insert,I
R3516 T4886 T4887 arg1Of insert,of
R3517 T4886 T4889 arg1Of insert,was
R3518 T4886 T4890 arg2Of insert,sub-cloned
R3519 T4886 T4892 arg1Of insert,upstream
R3520 T4888 T4887 arg2Of pDB9402-42,of
R3521 T4890 T4889 arg2Of sub-cloned,was
R3522 T4892 T4890 arg3Of upstream,sub-cloned
R3523 T4892 T4891 arg1Of upstream,immediately
R3524 T4892 T4893 arg1Of upstream,of
R3525 T4899 T4893 arg2Of site,of
R3526 T4899 T4894 arg1Of site,the
R3527 T4899 T4895 arg1Of site,SerpinB2
R3528 T4899 T4896 arg1Of site,promoter
R3529 T4899 T4897 arg1Of site,EcoR
R3530 T4899 T4898 arg1Of site,I
R3531 T4899 T4900 arg1Of site,(
R3532 T4899 T4903 arg1Of site,of
R3533 T4899 T4905 modOf site,to
R3534 T4901 T4900 arg2Of −3261,(
R3535 T4902 T4900 arg3Of ),(
R3536 T4904 T4903 arg2Of pGLmP-3261,of
R3537 T4906 T4905 arg1Of produce,to
R3538 T4907 T4906 arg2Of pGLmP-4480,produce
R3539 T4913 T4908 arg1Of constructs,Additional
R3540 T4913 T4909 arg1Of constructs,murine
R3541 T4913 T4910 arg1Of constructs,SerpinB2
R3542 T4913 T4911 arg1Of constructs,luciferase
R3543 T4913 T4912 arg1Of constructs,reporter
R3544 T4913 T4914 arg1Of constructs,(
R3545 T4913 T4929 arg1Of constructs,were
R3546 T4913 T4930 arg2Of constructs,generated
R3547 T4915 T4916 arg1Of pGLmP-2751,","
R3548 T4916 T4918 arg1Of ",",","
R3549 T4917 T4916 arg2Of pGLmP-2614,","
R3550 T4918 T4920 arg1Of ",",","
R3551 T4919 T4918 arg2Of pGLmP-1686,","
R3552 T4920 T4922 arg1Of ",",","
R3553 T4921 T4920 arg2Of pGLmP-1341,","
R3554 T4922 T4924 arg1Of ",",","
R3555 T4923 T4922 arg2Of pGLmP-694,","
R3556 T4924 T4926 arg1Of ",",and
R3557 T4925 T4924 arg2Of pGLmP-539,","
R3558 T4926 T4914 arg2Of and,(
R3559 T4927 T4926 arg2Of pGLmP-189,and
R3560 T4928 T4914 arg3Of ),(
R3561 T4930 T4929 arg2Of generated,were
R3562 T4930 T4931 arg1Of generated,by
R3563 T4930 T4965 arg1Of generated,","
R3564 T4932 T4931 arg2Of digesting,by
R3565 T4932 T4942 arg1Of digesting,(
R3566 T4933 T4934 arg1Of pGLmP-3261,with
R3567 T4933 T4937 arg1Of pGLmP-3261,and
R3568 T4935 T4934 arg2Of EcoR,with
R3569 T4935 T4936 arg1Of EcoR,I
R3570 T4937 T4932 arg2Of and,digesting
R3571 T4941 T4937 arg2Of enzyme,and
R3572 T4941 T4938 arg1Of enzyme,a
R3573 T4941 T4939 arg1Of enzyme,second
R3574 T4941 T4940 arg1Of enzyme,restriction
R3575 T4944 T4943 arg1Of I,Sfi
R3576 T4944 T4945 arg1Of I,","
R3577 T4945 T4948 arg1Of ",",","
R3578 T4947 T4945 arg2Of I,","
R3579 T4947 T4946 arg1Of I,Apa
R3580 T4948 T4951 arg1Of ",",","
R3581 T4950 T4948 arg2Of I,","
R3582 T4950 T4949 arg1Of I,BstX
R3583 T4951 T4954 arg1Of ",",","
R3584 T4953 T4951 arg2Of I,","
R3585 T4953 T4952 arg1Of I,Bsu36
R3586 T4954 T4957 arg1Of ",",","
R3587 T4956 T4954 arg2Of I,","
R3588 T4956 T4955 arg1Of I,Pac
R3589 T4957 T4960 arg1Of ",",and
R3590 T4959 T4957 arg2Of III,","
R3591 T4959 T4958 arg1Of III,Hae
R3592 T4960 T4942 arg2Of and,(
R3593 T4962 T4960 arg2Of I,and
R3594 T4962 T4961 arg1Of I,Apo
R3595 T4962 T4963 arg1Of I,respectively
R3596 T4964 T4942 arg3Of ),(
R3597 T4966 T4967 arg1Of blunt,ending
R3598 T4966 T4982 arg1Of blunt,re-ligating
R3599 T4966 T4985 arg1Of blunt,ends
R3600 T4967 T4981 arg1Of ending,and
R3601 T4970 T4971 arg1Of 5′,or
R3602 T4972 T4971 arg2Of 3′,or
R3603 T4973 T4967 arg2Of overhangs,ending
R3604 T4973 T4968 arg1Of overhangs,the
R3605 T4973 T4969 arg1Of overhangs,resultant
R3606 T4973 T4970 arg1Of overhangs,5′
R3607 T4973 T4972 arg1Of overhangs,3′
R3608 T4973 T4974 arg1Of overhangs,with
R3609 T4977 T4974 arg2Of polymerase,with
R3610 T4977 T4975 arg1Of polymerase,T4
R3611 T4977 T4976 arg1Of polymerase,DNA
R3612 T4977 T4978 arg1Of polymerase,(
R3613 T4979 T4978 arg2Of NEB,(
R3614 T4980 T4978 arg3Of ),(
R3615 T4982 T4981 arg2Of re-ligating,and
R3616 T4984 T4982 arg2Of vector,re-ligating
R3617 T4984 T4983 arg1Of vector,the
R3618 T4985 T4965 arg2Of ends,","
R3619 T4985 T4986 arg1Of ends,with
R3620 T4989 T4986 arg2Of ligase,with
R3621 T4989 T4987 arg1Of ligase,T4
R3622 T4989 T4988 arg1Of ligase,DNA
R3623 T4993 T4994 arg1Of BSPCR2,and
R3624 T4994 T4990 arg1Of and,The
R3625 T4994 T4991 arg1Of and,PCR
R3626 T4994 T4992 arg1Of and,primers
R3627 T4994 T4996 arg1Of and,were
R3628 T4994 T4997 arg2Of and,used
R3629 T4995 T4994 arg2Of DW3’LUC,and
R3630 T4997 T4996 arg2Of used,were
R3631 T4999 T4997 arg3Of subclone,used
R3632 T4999 T4998 arg1Of subclone,to
R3633 T4999 T5006 arg1Of subclone,to
R3634 T4999 T5008 arg1Of subclone,into
R3635 T5004 T4999 arg2Of regions,subclone
R3636 T5004 T5000 arg1Of regions,the
R3637 T5004 T5001 arg1Of regions,murine
R3638 T5004 T5002 arg1Of regions,SerpinB2
R3639 T5004 T5003 arg1Of regions,promoter
R3640 T5004 T5005 arg1Of regions,−87
R3641 T5007 T5006 arg2Of +92,to
R3642 T5012 T5010 arg1Of I,Kpn
R3643 T5012 T5011 arg1Of I,I/Xho
R3644 T5015 T5013 arg1Of sites,polylinker
R3645 T5015 T5014 arg1Of sites,restriction
R3646 T5015 T5016 arg1Of sites,of
R3647 T5015 T5020 arg2Of sites,produce
R3648 T5017 T5016 arg2Of pGL3,of
R3649 T5018 T5019 modOf Basic,to
R3650 T5020 T5019 arg1Of produce,to
R3651 T5021 T5008 arg2Of pGLmP-87,into
R3652 T5021 T5009 arg1Of pGLmP-87,the
R3653 T5021 T5012 arg1Of pGLmP-87,I
R3654 T5021 T5018 arg1Of pGLmP-87,Basic
R3655 T5025 T5022 arg1Of vector,The
R3656 T5025 T5023 arg1Of vector,control
R3657 T5025 T5024 arg1Of vector,empty
R3658 T5025 T5026 arg1Of vector,was
R3659 T5028 T5027 arg1Of Basic,pGL3
R3660 T5030 T5026 arg2Of Promega,was
R3661 T5030 T5028 arg1Of Promega,Basic
R3662 T5030 T5029 arg2Of Promega,(
R3663 T5031 T5029 arg3Of ),(
R3664 T5034 T5032 arg1Of constructs,Luciferase
R3665 T5034 T5033 arg1Of constructs,reporter
R3666 T5034 T5035 arg1Of constructs,containing
R3667 T5034 T5051 arg1Of constructs,(
R3668 T5034 T5061 arg1Of constructs,were
R3669 T5034 T5062 arg2Of constructs,generated
R3670 T5036 T5035 arg2Of mutations,containing
R3671 T5036 T5037 arg1Of mutations,in
R3672 T5036 T5045 arg1Of mutations,","
R3673 T5044 T5037 arg2Of box,in
R3674 T5044 T5038 arg1Of box,the
R3675 T5044 T5039 arg1Of box,SerpinB2
R3676 T5044 T5040 arg1Of box,promoter
R3677 T5044 T5041 arg1Of box,LPS-responsive
R3678 T5044 T5042 arg1Of box,regions
R3679 T5044 T5043 arg1Of box,E
R3680 T5046 T5047 arg1Of PU.1,","
R3681 T5047 T5049 arg1Of ",",and
R3682 T5048 T5047 arg2Of Oct-1,","
R3683 T5049 T5045 arg2Of and,","
R3684 T5050 T5049 arg2Of C/EBP,and
R3685 T5052 T5053 arg1Of pGLmP-539mEbox,","
R3686 T5053 T5055 arg1Of ",",","
R3687 T5054 T5053 arg2Of pGLmP-539mPU.1,","
R3688 T5055 T5057 arg1Of ",",and
R3689 T5056 T5055 arg2Of pGLmP-539mOct,","
R3690 T5057 T5051 arg2Of and,(
R3691 T5057 T5059 arg1Of and,respectively
R3692 T5058 T5057 arg2Of pGLmP-539mC/EBP,and
R3693 T5060 T5051 arg3Of ),(
R3694 T5062 T5061 arg2Of generated,were
R3695 T5062 T5063 arg1Of generated,as
R3696 T5064 T5063 arg2Of described,as
R3697 T5064 T5065 arg1Of described,[
R3698 T5066 T5065 arg2Of 36,[
R3699 T5067 T5065 arg3Of ],[
R3700 T5073 T5068 arg1Of sequences,The
R3701 T5073 T5069 arg1Of sequences,mutant
R3702 T5073 T5070 arg1Of sequences,oligonucleotide
R3703 T5073 T5071 arg1Of sequences,PCR
R3704 T5073 T5072 arg1Of sequences,primer
R3705 T5073 T5074 arg1Of sequences,are
R3706 T5073 T5075 arg2Of sequences,provided
R3707 T5073 T5081 arg1Of sequences,were
R3708 T5073 T5082 arg2Of sequences,used
R3709 T5075 T5074 arg2Of provided,are
R3710 T5075 T5076 arg1Of provided,in
R3711 T5075 T5080 arg1Of provided,and
R3712 T5078 T5076 arg2Of S1,in
R3713 T5078 T5077 arg1Of S1,Fig.
R3714 T5080 T5079 arg1Of and,","
R3715 T5082 T5080 arg2Of used,and
R3716 T5082 T5081 arg2Of used,were
R3717 T5083 T5082 arg3Of as,used
R3718 T5084 T5083 arg2Of follows,as
R3719 T5084 T5085 arg1Of follows,:
R3720 T5086 T5084 arg2Of pGLmP-539mEbox,follows
R3721 T5086 T5087 arg1Of pGLmP-539mEbox,:
R3722 T5086 T5093 arg1Of pGLmP-539mEbox,:
R3723 T5086 T5097 arg1Of pGLmP-539mEbox,;
R3724 T5086 T5099 arg1Of pGLmP-539mEbox,:
R3725 T5086 T5103 arg1Of pGLmP-539mEbox,;
R3726 T5086 T5105 arg1Of pGLmP-539mEbox,:
R3727 T5088 T5089 arg1Of mPAI2mEboxa,and
R3728 T5089 T5087 arg2Of and,:
R3729 T5089 T5091 arg1Of and,;
R3730 T5090 T5089 arg2Of mPAI2mEboxb,and
R3731 T5092 T5091 arg2Of pGLmP-539mPU.1,;
R3732 T5094 T5095 arg1Of mPAI2mPU.1a,and
R3733 T5095 T5093 arg2Of and,:
R3734 T5096 T5095 arg2Of mPAI2mPU.1b,and
R3735 T5098 T5097 arg2Of pGLmP-539mOct,;
R3736 T5100 T5101 arg1Of mPAI2mOct-2a,and
R3737 T5101 T5099 arg2Of and,:
R3738 T5102 T5101 arg2Of mPAI2mOct-2b,and
R3739 T5104 T5103 arg2Of pGLmP-539mC/EBP,;
R3740 T5106 T5107 arg1Of mPAI2mCEBPa,and
R3741 T5107 T5105 arg2Of and,:
R3742 T5108 T5107 arg2Of mPAI2mCEBPb,and
R3743 T5112 T5109 arg1Of primers,The
R3744 T5112 T5110 arg1Of primers,oligonucleotide
R3745 T5112 T5111 arg1Of primers,PCR
R3746 T5112 T5113 arg2Of primers,used
R3747 T5112 T5115 arg1Of primers,generate
R3748 T5112 T5117 arg1Of primers,","
R3749 T5112 T5124 arg1Of primers,were
R3750 T5112 T5125 arg2Of primers,reported
R3751 T5115 T5113 arg3Of generate,used
R3752 T5115 T5114 arg1Of generate,to
R3753 T5116 T5115 arg2Of mutants,generate
R3754 T5118 T5119 arg1Of pGLmP-539mCRE,","
R3755 T5119 T5122 arg1Of ",",and
R3756 T5120 T5119 arg2Of pGLmP-539mAP-1a,","
R3757 T5122 T5117 arg2Of and,","
R3758 T5122 T5121 arg1Of and,","
R3759 T5123 T5122 arg2Of pGLmP-539mAP-1b,and
R3760 T5125 T5124 arg2Of reported,were
R3761 T5125 T5126 arg1Of reported,previously
R3762 T5125 T5127 arg1Of reported,[
R3763 T5128 T5127 arg2Of 37,[
R3764 T5129 T5127 arg3Of ],[
R3765 T5134 T5130 arg1Of primers,The
R3766 T5134 T5131 arg1Of primers,flanking
R3767 T5134 T5132 arg1Of primers,oligonucleotide
R3768 T5134 T5133 arg1Of primers,PCR
R3769 T5134 T5135 arg1Of primers,were
R3770 T5136 T5137 arg1Of RVprimer3,(
R3771 T5136 T5140 arg1Of RVprimer3,and
R3772 T5138 T5137 arg2Of Promega,(
R3773 T5139 T5137 arg3Of ),(
R3774 T5140 T5135 arg2Of and,were
R3775 T5140 T5146 modOf and,39
R3776 T5141 T5140 arg2Of GLprimer2,and
R3777 T5141 T5142 arg1Of GLprimer2,(
R3778 T5143 T5142 arg2Of Promega,(
R3779 T5144 T5142 arg3Of ),(
R3780 T5145 T5146 arg1Of . pGLmP-5,39
R3781 T5145 T5147 arg2Of . pGLmP-5,was
R3782 T5147 T5146 arg2Of was ,39
R3783 T5147 T5148 arg1Of was ,us
R3784 T5150 T5148 arg2Of as the t,us
R3785 T5150 T5149 arg1Of as the t,ed
R3786 T5150 T5151 arg1Of as the t,em
R3787 T5153 T5151 arg2Of e in,em
R3788 T5153 T5152 arg1Of e in,plat
R3789 T5156 T5154 arg1Of products,Recombinant
R3790 T5156 T5155 arg1Of products,PCR
R3791 T5156 T5157 arg1Of products,were
R3792 T5156 T5158 arg2Of products,digested
R3793 T5156 T5166 arg2Of products,cloned
R3794 T5158 T5159 arg1Of digested,with
R3795 T5158 T5165 arg1Of digested,and
R3796 T5160 T5161 arg1Of EcoR,I
R3797 T5160 T5162 arg1Of EcoR,and
R3798 T5162 T5159 arg2Of and,with
R3799 T5164 T5162 arg2Of I,and
R3800 T5164 T5163 arg1Of I,Xho
R3801 T5165 T5157 arg2Of and,were
R3802 T5166 T5165 arg2Of cloned,and
R3803 T5166 T5167 arg1Of cloned,between
R3804 T5166 T5178 arg1Of cloned,in
R3805 T5170 T5171 arg1Of I,and
R3806 T5172 T5171 arg2Of Xho,and
R3807 T5175 T5167 arg2Of sites,between
R3808 T5175 T5168 arg1Of sites,the
R3809 T5175 T5169 arg1Of sites,EcoR
R3810 T5175 T5170 arg1Of sites,I
R3811 T5175 T5172 arg1Of sites,Xho
R3812 T5175 T5173 arg1Of sites,I
R3813 T5175 T5174 arg1Of sites,restriction
R3814 T5175 T5176 arg1Of sites,of
R3815 T5177 T5176 arg2Of pGLmP-539,of
R3816 T5179 T5178 arg2Of place,in
R3817 T5179 T5180 arg1Of place,of
R3818 T5183 T5180 arg2Of region,of
R3819 T5183 T5181 arg1Of region,the
R3820 T5183 T5182 arg1Of region,−539/+92
R3821 T5183 T5184 arg1Of region,of
R3822 T5189 T5184 arg2Of promoter,of
R3823 T5189 T5185 arg1Of promoter,the
R3824 T5189 T5186 arg1Of promoter,wild-type
R3825 T5189 T5187 arg1Of promoter,murine
R3826 T5189 T5188 arg1Of promoter,SerpinB2
R3827 T5190 T5191 arg1Of Sequence,verified
R3828 T5192 T5193 arg1Of constructs,were
R3829 T5192 T5194 arg2Of constructs,used
R3830 T5194 T5191 arg2Of used,verified
R3831 T5194 T5193 arg2Of used,were
R3832 T5194 T5195 arg1Of used,in
R3833 T5197 T5195 arg2Of experiments,in
R3834 T5197 T5196 arg1Of experiments,the

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4782 200-208 Protein denotes SerpinB2
T4781 16-38 Protein denotes SerpinB2 Reporter Gene
T4800 2153-2161 Protein denotes SerpinB2
T4799 2020-2025 Protein denotes Xho I
T4798 2009-2015 Protein denotes EcoR I
T4797 1218-1226 Protein denotes SerpinB2
T4796 1159-1178 Protein denotes Luciferase reporter
T4795 986-994 Protein denotes SerpinB2
T4794 903-916 Protein denotes T4 DNA ligase
T4793 842-859 Protein denotes T4 DNA polymerase
T4792 770-775 Protein denotes Apo I
T4791 758-765 Protein denotes Hae III
T4790 751-756 Protein denotes Pac I
T4789 742-749 Protein denotes Bsu36 I
T4788 734-740 Protein denotes BstX I
T4787 727-732 Protein denotes Apa I
T4786 720-725 Protein denotes Sfi I
T4785 680-686 Protein denotes EcoR I
T4784 511-539 Protein denotes SerpinB2 luciferase reporter
T4783 418-426 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5247 1266-1270 http://www.uniprot.org/uniprot/P17947 denotes PU.1
T5246 1159-1169 http://www.uniprot.org/uniprot/P08659 denotes Luciferase
T5245 520-530 http://www.uniprot.org/uniprot/P08659 denotes luciferase
T5244 2153-2161 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T5243 1218-1226 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T5242 986-994 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T5241 511-519 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T5240 418-426 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T5239 200-208 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T5238 16-24 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

sentences

Id Subject Object Predicate Lexical cue
T4752 2172-2230 Sentence denotes Sequence verified constructs were used in the experiments.
T4751 1965-2171 Sentence denotes Recombinant PCR products were digested with EcoR I and Xho I and cloned between the EcoR I and Xho I restriction sites of pGLmP-539 in place of the −539/+92 region of the wild-type murine SerpinB2 promoter.
T4750 1825-1964 Sentence denotes The flanking oligonucleotide PCR primers were RVprimer3 (Promega) and GLprimer2 (Promega). pGLmP-539 was used as the template in each case.
T4749 1684-1824 Sentence denotes The oligonucleotide PCR primers used to generate mutants, pGLmP-539mCRE, pGLmP-539mAP-1a, and pGLmP-539mAP-1b were reported previously [37].
T4748 1403-1683 Sentence denotes The mutant oligonucleotide PCR primer sequences are provided in Fig. S1, and were used as follows: pGLmP-539mEbox: mPAI2mEboxa and mPAI2mEboxb; pGLmP-539mPU.1: mPAI2mPU.1a and mPAI2mPU.1b; pGLmP-539mOct: mPAI2mOct-2a and mPAI2mOct-2b; pGLmP-539mC/EBP: mPAI2mCEBPa and mPAI2mCEBPb.
T4747 1159-1402 Sentence denotes Luciferase reporter constructs containing mutations in the SerpinB2 promoter LPS-responsive regions E box, PU.1, Oct-1 and C/EBP (pGLmP-539mEbox, pGLmP-539mPU.1, pGLmP-539mOct and pGLmP-539mC/EBP respectively) were generated as described [36].
T4746 1108-1158 Sentence denotes The control empty vector was pGL3 Basic (Promega).
T4745 918-1107 Sentence denotes The PCR primers BSPCR2 and DW3’LUC were used to subclone the murine SerpinB2 promoter regions −87 to +92 into the Kpn I/Xho I polylinker restriction sites of pGL3 Basic to produce pGLmP-87.
T4744 493-917 Sentence denotes Additional murine SerpinB2 luciferase reporter constructs (pGLmP-2751, pGLmP-2614, pGLmP-1686, pGLmP-1341, pGLmP-694, pGLmP-539 and pGLmP-189) were generated by digesting pGLmP-3261 with EcoR I and a second restriction enzyme (Sfi I, Apa I, BstX I, Bsu36 I, Pac I, Hae III and Apo I respectively), blunt ending the resultant 5′ or 3′ overhangs with T4 DNA polymerase (NEB) and re-ligating the vector ends with T4 DNA ligase.
T4743 343-492 Sentence denotes The EcoR I insert of pDB9402-42 was sub-cloned immediately upstream of the SerpinB2 promoter EcoR I site (−3261) of pGLmP-3261 to produce pGLmP-4480.
T4742 48-342 Sentence denotes The PCR primers DW5’LUC, containing a Kpn I restriction site, and DW3’LUC, containing an Xho I restriction site, were used to PCR amplify and clone the SerpinB2 promoter (−3261 to +92) from pDB9406 into the Kpn I/Xho I polylinker restriction sites of pGL3 Basic (Promega) to produce pGLmP-3261.
T4741 0-47 Sentence denotes Construction of SerpinB2 Reporter Gene Plasmids
T57 0-47 Sentence denotes Construction of SerpinB2 Reporter Gene Plasmids
T58 48-342 Sentence denotes The PCR primers DW5’LUC, containing a Kpn I restriction site, and DW3’LUC, containing an Xho I restriction site, were used to PCR amplify and clone the SerpinB2 promoter (−3261 to +92) from pDB9406 into the Kpn I/Xho I polylinker restriction sites of pGL3 Basic (Promega) to produce pGLmP-3261.
T59 343-492 Sentence denotes The EcoR I insert of pDB9402-42 was sub-cloned immediately upstream of the SerpinB2 promoter EcoR I site (−3261) of pGLmP-3261 to produce pGLmP-4480.
T60 493-917 Sentence denotes Additional murine SerpinB2 luciferase reporter constructs (pGLmP-2751, pGLmP-2614, pGLmP-1686, pGLmP-1341, pGLmP-694, pGLmP-539 and pGLmP-189) were generated by digesting pGLmP-3261 with EcoR I and a second restriction enzyme (Sfi I, Apa I, BstX I, Bsu36 I, Pac I, Hae III and Apo I respectively), blunt ending the resultant 5′ or 3′ overhangs with T4 DNA polymerase (NEB) and re-ligating the vector ends with T4 DNA ligase.
T61 918-1107 Sentence denotes The PCR primers BSPCR2 and DW3’LUC were used to subclone the murine SerpinB2 promoter regions −87 to +92 into the Kpn I/Xho I polylinker restriction sites of pGL3 Basic to produce pGLmP-87.
T62 1108-1158 Sentence denotes The control empty vector was pGL3 Basic (Promega).
T63 1159-1402 Sentence denotes Luciferase reporter constructs containing mutations in the SerpinB2 promoter LPS-responsive regions E box, PU.1, Oct-1 and C/EBP (pGLmP-539mEbox, pGLmP-539mPU.1, pGLmP-539mOct and pGLmP-539mC/EBP respectively) were generated as described [36].
T64 1403-1683 Sentence denotes The mutant oligonucleotide PCR primer sequences are provided in Fig. S1, and were used as follows: pGLmP-539mEbox: mPAI2mEboxa and mPAI2mEboxb; pGLmP-539mPU.1: mPAI2mPU.1a and mPAI2mPU.1b; pGLmP-539mOct: mPAI2mOct-2a and mPAI2mOct-2b; pGLmP-539mC/EBP: mPAI2mCEBPa and mPAI2mCEBPb.
T65 1684-1824 Sentence denotes The oligonucleotide PCR primers used to generate mutants, pGLmP-539mCRE, pGLmP-539mAP-1a, and pGLmP-539mAP-1b were reported previously [37].
T66 1825-1964 Sentence denotes The flanking oligonucleotide PCR primers were RVprimer3 (Promega) and GLprimer2 (Promega). pGLmP-539 was used as the template in each case.
T67 1965-2171 Sentence denotes Recombinant PCR products were digested with EcoR I and Xho I and cloned between the EcoR I and Xho I restriction sites of pGLmP-539 in place of the −539/+92 region of the wild-type murine SerpinB2 promoter.
T68 2172-2230 Sentence denotes Sequence verified constructs were used in the experiments.

simple1

Id Subject Object Predicate Lexical cue
T4820 2153-2161 Protein denotes SerpinB2
T4819 2020-2025 Protein denotes Xho I
T4818 2009-2015 Protein denotes EcoR I
T4817 1218-1226 Protein denotes SerpinB2
T4816 1159-1178 Protein denotes Luciferase reporter
T4815 986-994 Protein denotes SerpinB2
T4814 903-916 Protein denotes T4 DNA ligase
T4813 842-859 Protein denotes T4 DNA polymerase
T4812 770-775 Protein denotes Apo I
T4811 758-765 Protein denotes Hae III
T4810 751-756 Protein denotes Pac I
T4809 742-749 Protein denotes Bsu36 I
T4808 734-740 Protein denotes BstX I
T4807 727-732 Protein denotes Apa I
T4806 720-725 Protein denotes Sfi I
T4805 680-686 Protein denotes EcoR I
T4804 511-539 Protein denotes SerpinB2 luciferase reporter
T4803 418-426 Protein denotes SerpinB2
T4802 200-208 Protein denotes SerpinB2
T4801 16-38 Protein denotes SerpinB2 Reporter Gene

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T5237 2153-2161 Protein denotes SerpinB2
T5236 2020-2025 Protein denotes Xho I
T5235 2009-2015 Protein denotes EcoR I
T5234 1218-1226 Protein denotes SerpinB2
T5233 1159-1178 Protein denotes Luciferase reporter
T5232 986-994 Protein denotes SerpinB2
T5231 742-749 Protein denotes Bsu36 I
T5230 734-740 Protein denotes BstX I
T5229 727-732 Protein denotes Apa I
T5228 720-725 Protein denotes Sfi I
T5227 680-686 Protein denotes EcoR I
T5226 511-539 Protein denotes SerpinB2 luciferase reporter
T5225 903-916 Protein denotes T4 DNA ligase
T5224 842-859 Protein denotes T4 DNA polymerase
T5223 770-775 Protein denotes Apo I
T5222 758-765 Protein denotes Hae III
T5221 751-756 Protein denotes Pac I
T5220 418-426 Protein denotes SerpinB2
T5219 200-208 Protein denotes SerpinB2
T5218 16-38 Protein denotes SerpinB2 Reporter Gene

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T5308 2153-2161 Protein denotes SerpinB2
T5307 2020-2025 Protein denotes Xho I
T5306 2009-2015 Protein denotes EcoR I
T5305 1218-1226 Protein denotes SerpinB2
T5304 1159-1178 Protein denotes Luciferase reporter
T5303 986-994 Protein denotes SerpinB2
T5302 742-749 Protein denotes Bsu36 I
T5301 734-740 Protein denotes BstX I
T5300 727-732 Protein denotes Apa I
T5299 720-725 Protein denotes Sfi I
T5298 680-686 Protein denotes EcoR I
T5297 511-539 Protein denotes SerpinB2 luciferase reporter
T5296 903-916 Protein denotes T4 DNA ligase
T5295 842-859 Protein denotes T4 DNA polymerase
T5294 770-775 Protein denotes Apo I
T5293 758-765 Protein denotes Hae III
T5292 751-756 Protein denotes Pac I
T5291 418-426 Protein denotes SerpinB2
T5290 200-208 Protein denotes SerpinB2
T5289 16-38 Protein denotes SerpinB2 Reporter Gene

DLUT931

Id Subject Object Predicate Lexical cue
T5268 0-12 Positive_regulation denotes Construction
T5267 2153-2161 Protein denotes SerpinB2
T5266 2020-2025 Protein denotes Xho I
T5265 2009-2015 Protein denotes EcoR I
T5264 1218-1226 Protein denotes SerpinB2
T5263 1159-1178 Protein denotes Luciferase reporter
T5262 986-994 Protein denotes SerpinB2
T5261 742-749 Protein denotes Bsu36 I
T5260 734-740 Protein denotes BstX I
T5259 727-732 Protein denotes Apa I
T5258 720-725 Protein denotes Sfi I
T5257 680-686 Protein denotes EcoR I
T5256 511-539 Protein denotes SerpinB2 luciferase reporter
T5255 903-916 Protein denotes T4 DNA ligase
T5254 842-859 Protein denotes T4 DNA polymerase
T5253 770-775 Protein denotes Apo I
T5252 758-765 Protein denotes Hae III
T5251 751-756 Protein denotes Pac I
T5250 418-426 Protein denotes SerpinB2
T5249 200-208 Protein denotes SerpinB2
T5248 16-38 Protein denotes SerpinB2 Reporter Gene
R3836 T5248 T5268 themeOf SerpinB2 Reporter Gene,Construction

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T5482 842-865 Protein denotes T4 DNA polymerase (NEB)
T5481 734-740 Protein denotes BstX I
T5480 770-775 Protein denotes Apo I
T5479 511-550 Protein denotes SerpinB2 luciferase reporter constructs
T5478 576-579 Protein denotes pGL
T5477 975-1011 Entity denotes the murine SerpinB2 promoter regions
T5476 460-464 Protein denotes GLmP
T5475 1503-1507 Protein denotes GLmP
T5474 1639-1643 Protein denotes GLmP
T5473 2045-2055 Protein denotes the EcoR I
T5472 680-686 Protein denotes EcoR I
T5471 1638-1653 Protein denotes pGLmP-539mC/EBP
T5470 1854-1857 Protein denotes PCR
T5469 1214-1250 Entity denotes the SerpinB2 promoter LPS-responsive
T5468 174-177 Protein denotes PCR
T5467 304-319 Protein denotes Basic (Promega)
T5466 552-553 Entity denotes p
T5465 1825-1865 Entity denotes The flanking oligonucleotide PCR primers
T5464 347-353 Protein denotes EcoR I
T5463 565-569 Protein denotes GLmP
T5462 758-765 Protein denotes Hae III
T5461 1218-1226 Protein denotes SerpinB2
T5460 2020-2025 Protein denotes Xho I
T5459 1467-1470 Protein denotes Fig
T5458 1672-1676 Protein denotes PAI2
T5457 1757-1772 Protein denotes pGLmP-539mAP-1a
T5456 459-491 Entity denotes pGLmP-3261 to produce pGLmP-4480
T5455 600-601 Entity denotes p
T5454 1593-1597 Protein denotes GLmP
T5453 1282-1287 Protein denotes C/EBP
T5452 1758-1762 Protein denotes GLmP
T5451 332-336 Protein denotes GLmP
T5450 84-108 Entity denotes a Kpn I restriction site
T5449 742-749 Protein denotes Bsu36 I
T5448 2153-2161 Protein denotes SerpinB2
T5447 2129-2170 Entity denotes of the wild-type murine SerpinB2 promoter
T5446 611-616 Protein denotes pGLmP
T5445 414-455 Entity denotes the SerpinB2 promoter EcoR I site (−3261)
T5444 482-486 Protein denotes GLmP
T5443 200-208 Protein denotes SerpinB2
T5442 1671-1682 Protein denotes mPAI2mCEBPb
T5441 1403-1450 Entity denotes The mutant oligonucleotide PCR primer sequences
T5440 1137-1141 Protein denotes pGL3
T5439 414-455 Entity denotes the SerpinB2 promoter EcoR I site (−3261)
T5438 1339-1354 Protein denotes pGLmP-539mC/EBP
T5437 1081-1106 Protein denotes Basic to produce pGLmP-87
T5436 1655-1666 Protein denotes mPAI2mCEBPa
T5435 481-491 Entity denotes pGLmP-4480
T5434 564-565 Entity denotes p
T5433 436-442 Protein denotes EcoR I
T5432 1656-1660 Protein denotes PAI2
T5431 137-142 Protein denotes Xho I
T5430 903-905 Entity denotes T4
T5429 1778-1793 Protein denotes pGLmP-539mAP-1b
T5428 1742-1752 Protein denotes pGLmP-539m
T5427 52-55 Protein denotes PCR
T5426 1684-1715 Entity denotes The oligonucleotide PCR primers
T5425 664-669 Protein denotes pGLmP
T5424 418-426 Protein denotes SerpinB2
T5423 1159-1169 Protein denotes Luciferase
T5422 720-725 Protein denotes Sfi I
T5421 1137-1157 Protein denotes pGL3 Basic (Promega)
T5420 903-916 Protein denotes T4 DNA ligase
T5419 1779-1783 Protein denotes GLmP
T5418 1977-1980 Protein denotes PCR
T5417 922-925 Protein denotes PCR
T5416 986-994 Protein denotes SerpinB2
T5415 1266-1270 Protein denotes PU.1
T5414 712-726 Protein denotes enzyme (Sfi I,
T5413 601-605 Protein denotes GLmP
T5412 1290-1294 Protein denotes GLmP
T5411 751-756 Protein denotes Pac I
T5410 1321-1334 Protein denotes pGLmP-539mOct
T5409 13-47 Protein denotes of SerpinB2 Reporter Gene Plasmids
T5408 1704-1707 Protein denotes PCR
T5407 196-232 Entity denotes the SerpinB2 promoter (−3261 to +92)
T5406 2088-2092 Protein denotes GLmP
T5405 331-341 Entity denotes pGLmP-3261
T5404 2060-2065 Protein denotes Xho I
T5403 553-557 Protein denotes GLmP
T5402 1965-1989 Entity denotes Recombinant PCR products
T5401 625-630 Protein denotes pGLmP
T5400 1592-1605 Protein denotes pGLmP-539mOct
T5399 511-519 Protein denotes SerpinB2
T5398 1251-1271 Entity denotes regions E box, PU.1,
T5397 680-775 Protein denotes EcoR I and a second restriction enzyme (Sfi I, Apa I, BstX I, Bsu36 I, Pac I, Hae III and Apo I
T5396 1322-1326 Protein denotes GLmP
T5395 842-844 Entity denotes T4
T5394 2087-2096 Entity denotes pGLmP-539
T5393 580-593 Protein denotes P-1686, pGLmP
T5392 1430-1433 Protein denotes PCR
T5391 2009-2015 Protein denotes EcoR I
T5390 861-864 Protein denotes NEB
T5389 1340-1344 Protein denotes GLmP
R3841 T5407 T5443 partOf the SerpinB2 promoter (−3261 to +92),SerpinB2
R3842 T5447 T5448 partOf of the wild-type murine SerpinB2 promoter,SerpinB2
R3843 T5469 T5461 partOf the SerpinB2 promoter LPS-responsive,SerpinB2

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T5348 2153-2170 Protein denotes SerpinB2 promoter
T5347 2060-2065 Protein denotes Xho I
T5346 2049-2055 Protein denotes EcoR I
T5345 2020-2025 Protein denotes Xho I
T5344 2009-2015 Protein denotes EcoR I
T5343 1965-1989 Protein denotes Recombinant PCR products
T5342 1671-1682 Protein denotes mPAI2mCEBPb
T5341 1655-1666 Protein denotes mPAI2mCEBPa
T5340 1638-1653 Protein denotes pGLmP-539mC/EBP
T5339 1624-1636 Protein denotes mPAI2mOct-2b
T5338 1607-1619 Protein denotes mPAI2mOct-2a
T5337 1592-1605 Protein denotes pGLmP-539mOct
T5336 1579-1590 Protein denotes mPAI2mPU.1b
T5335 1563-1574 Protein denotes mPAI2mPU.1a
T5334 1467-1470 Protein denotes Fig
T5333 1282-1287 Protein denotes C/EBP
T5332 1272-1277 Protein denotes Oct-1
T5331 1266-1270 Protein denotes PU.1
T5330 1159-1189 Protein denotes Luciferase reporter constructs
T5329 1090-1097 Gene_expression denotes produce
T5328 1076-1080 Protein denotes pGL3
T5327 1032-1043 Protein denotes Kpn I/Xho I
T5326 903-916 Protein denotes T4 DNA ligase
T5325 861-864 Protein denotes NEB
T5324 842-859 Protein denotes T4 DNA polymerase
T5323 770-775 Protein denotes Apo I
T5322 758-765 Protein denotes Hae III
T5321 751-756 Protein denotes Pac I
T5320 742-749 Protein denotes Bsu36 I
T5319 734-740 Protein denotes BstX I
T5318 727-732 Protein denotes Apa I
T5317 720-725 Protein denotes Sfi I
T5316 680-686 Protein denotes EcoR I
T5315 504-539 Protein denotes murine SerpinB2 luciferase reporter
T5314 473-480 Gene_expression denotes produce
T5313 347-353 Protein denotes EcoR I
T5312 299-303 Protein denotes pGL3
T5311 255-266 Protein denotes Kpn I/Xho I
T5310 86-91 Protein denotes Kpn I
T5309 16-38 Protein denotes SerpinB2 Reporter Gene
R3837 T5313 T5314 themeOf EcoR I,produce
R3838 T5328 T5329 themeOf pGL3,produce

testone

Id Subject Object Predicate Lexical cue
T4698 1090-1097 Gene_expression denotes produce
T4697 473-480 Gene_expression denotes produce
T4696 323-330 Gene_expression denotes produce
T4695 2153-2161 Protein denotes SerpinB2
T4694 2020-2025 Protein denotes Xho I
T4693 2009-2015 Protein denotes EcoR I
T4692 1218-1226 Protein denotes SerpinB2
T4691 1159-1178 Protein denotes Luciferase reporter
T4690 986-994 Protein denotes SerpinB2
T4689 903-916 Protein denotes T4 DNA ligase
T4688 842-859 Protein denotes T4 DNA polymerase
T4687 770-775 Protein denotes Apo I
T4686 758-765 Protein denotes Hae III
T4685 751-756 Protein denotes Pac I
T4684 742-749 Protein denotes Bsu36 I
T4683 734-740 Protein denotes BstX I
T4682 727-732 Protein denotes Apa I
T4681 720-725 Protein denotes Sfi I
T4680 680-686 Protein denotes EcoR I
T4679 511-539 Protein denotes SerpinB2 luciferase reporter
T4678 418-426 Protein denotes SerpinB2
T4677 200-208 Protein denotes SerpinB2
T4676 16-38 Protein denotes SerpinB2 Reporter Gene

test3

Id Subject Object Predicate Lexical cue
T4740 2153-2161 Protein denotes SerpinB2
T4739 2020-2025 Protein denotes Xho I
T4738 2009-2015 Protein denotes EcoR I
T4737 1218-1226 Protein denotes SerpinB2
T4736 1159-1178 Protein denotes Luciferase reporter
T4735 986-994 Protein denotes SerpinB2
T4734 903-916 Protein denotes T4 DNA ligase
T4733 842-859 Protein denotes T4 DNA polymerase
T4732 770-775 Protein denotes Apo I
T4731 758-765 Protein denotes Hae III
T4730 751-756 Protein denotes Pac I
T4729 742-749 Protein denotes Bsu36 I
T4728 734-740 Protein denotes BstX I
T4727 727-732 Protein denotes Apa I
T4726 720-725 Protein denotes Sfi I
T4725 680-686 Protein denotes EcoR I
T4724 511-539 Protein denotes SerpinB2 luciferase reporter
T4723 473-480 Gene_expression denotes produce
T4722 418-426 Protein denotes SerpinB2
T4721 323-330 Gene_expression denotes produce
T4720 200-208 Protein denotes SerpinB2
T4719 16-38 Protein denotes SerpinB2 Reporter Gene
T4718 2153-2161 Protein denotes SerpinB2
T4717 2020-2025 Protein denotes Xho I
T4716 2009-2015 Protein denotes EcoR I
T4715 1218-1226 Protein denotes SerpinB2
T4714 1159-1178 Protein denotes Luciferase reporter
T4713 986-994 Protein denotes SerpinB2
T4712 903-916 Protein denotes T4 DNA ligase
T4711 842-859 Protein denotes T4 DNA polymerase
T4710 770-775 Protein denotes Apo I
T4709 758-765 Protein denotes Hae III
T4708 751-756 Protein denotes Pac I
T4707 742-749 Protein denotes Bsu36 I
T4706 734-740 Protein denotes BstX I
T4705 727-732 Protein denotes Apa I
T4704 720-725 Protein denotes Sfi I
T4703 680-686 Protein denotes EcoR I
T4702 511-539 Protein denotes SerpinB2 luciferase reporter
T4701 418-426 Protein denotes SerpinB2
T4700 200-208 Protein denotes SerpinB2
T4699 16-38 Protein denotes SerpinB2 Reporter Gene