PMC:3589482 / 8838-9039
Annnotations
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4651 | 200-201 | . | denotes | . |
| T4650 | 199-200 | -RRB- | denotes | ) |
| T4649 | 195-199 | NNP | denotes | Inc. |
| T4648 | 193-194 | , | denotes | , |
| T4647 | 183-193 | NNP | denotes | Technology |
| T4646 | 173-182 | NNP | denotes | Signaling |
| T4645 | 168-172 | NNP | denotes | Cell |
| T4644 | 167-168 | -LRB- | denotes | ( |
| T4643 | 159-166 | NN | denotes | tubulin |
| T4642 | 157-158 | FW | denotes | β |
| T4641 | 156-157 | FW | denotes | / |
| T4640 | 155-156 | VB | denotes | α |
| T4639 | 151-154 | CC | denotes | and |
| T4638 | 149-150 | -RRB- | denotes | ) |
| T4637 | 144-149 | NNP | denotes | GAPDH |
| T4636 | 143-144 | -LRB- | denotes | ( |
| T4635 | 129-142 | NN | denotes | dehydrogenase |
| T4634 | 102-128 | JJ | denotes | glyceraldehyde-3-phosphate |
| T4633 | 100-101 | , | denotes | , |
| T4632 | 99-100 | -RRB- | denotes | ) |
| T4631 | 84-99 | NNPS | denotes | Biotechnologies |
| T4630 | 79-83 | NNP | denotes | Cruz |
| T4629 | 73-78 | NNP | denotes | Santa |
| T4628 | 72-73 | -LRB- | denotes | ( |
| T4627 | 70-71 | -RRB- | denotes | ) |
| T4626 | 64-70 | JJ | denotes | sc-150 |
| T4625 | 63-64 | -LRB- | denotes | ( |
| T4624 | 61-62 | NN | denotes | β |
| T4623 | 60-61 | : | denotes | - |
| T4622 | 55-60 | SYM | denotes | C/EBP |
| T4621 | 53-54 | : | denotes | : |
| T4620 | 46-53 | VBP | denotes | include |
| T4619 | 39-45 | NNS | denotes | assays |
| T4618 | 34-38 | NN | denotes | blot |
| T4617 | 26-33 | JJ | denotes | western |
| T4616 | 22-25 | IN | denotes | for |
| T4615 | 17-21 | VBN | denotes | used |
| T4614 | 6-16 | NNS | denotes | antibodies |
| T4613 | 0-5 | JJ | denotes | Other |
| R3403 | T4613 | T4614 | amod | Other,antibodies |
| R3404 | T4614 | T4620 | nsubj | antibodies,include |
| R3405 | T4615 | T4614 | acl | used,antibodies |
| R3406 | T4616 | T4615 | prep | for,used |
| R3407 | T4617 | T4619 | amod | western,assays |
| R3408 | T4618 | T4619 | compound | blot,assays |
| R3409 | T4619 | T4616 | pobj | assays,for |
| R3410 | T4620 | T4620 | ROOT | include,include |
| R3411 | T4621 | T4620 | punct | :,include |
| R3412 | T4622 | T4624 | punct | C/EBP,β |
| R3413 | T4623 | T4624 | punct | -,β |
| R3414 | T4624 | T4620 | dobj | β,include |
| R3415 | T4625 | T4624 | punct | (,β |
| R3416 | T4626 | T4624 | appos | sc-150,β |
| R3417 | T4627 | T4624 | punct | ),β |
| R3418 | T4628 | T4631 | punct | (,Biotechnologies |
| R3419 | T4629 | T4631 | compound | Santa,Biotechnologies |
| R3420 | T4630 | T4631 | compound | Cruz,Biotechnologies |
| R3421 | T4631 | T4624 | parataxis | Biotechnologies,β |
| R3422 | T4632 | T4631 | punct | ),Biotechnologies |
| R3423 | T4633 | T4631 | punct | ",",Biotechnologies |
| R3424 | T4634 | T4635 | amod | glyceraldehyde-3-phosphate,dehydrogenase |
| R3425 | T4635 | T4631 | appos | dehydrogenase,Biotechnologies |
| R3426 | T4636 | T4637 | punct | (,GAPDH |
| R3427 | T4637 | T4635 | appos | GAPDH,dehydrogenase |
| R3428 | T4638 | T4637 | punct | ),GAPDH |
| R3429 | T4639 | T4635 | cc | and,dehydrogenase |
| R3430 | T4640 | T4643 | amod | α,tubulin |
| R3431 | T4641 | T4643 | compound | /,tubulin |
| R3432 | T4642 | T4643 | compound | β,tubulin |
| R3433 | T4643 | T4635 | conj | tubulin,dehydrogenase |
| R3434 | T4644 | T4649 | punct | (,Inc. |
| R3435 | T4645 | T4649 | nmod | Cell,Inc. |
| R3436 | T4646 | T4649 | nmod | Signaling,Inc. |
| R3437 | T4647 | T4646 | pobj | Technology,Signaling |
| R3438 | T4648 | T4649 | punct | ",",Inc. |
| R3439 | T4649 | T4643 | parataxis | Inc.,tubulin |
| R3440 | T4650 | T4649 | punct | ),Inc. |
| R3441 | T4651 | T4620 | punct | .,include |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4435 | 199-200 | -RRB- | denotes | ) |
| T4434 | 195-199 | NNP | denotes | Inc. |
| T4433 | 193-194 | -COMMA- | denotes | , |
| T4432 | 183-193 | NNP | denotes | Technology |
| T4431 | 173-182 | NNP | denotes | Signaling |
| T4430 | 168-172 | NNP | denotes | Cell |
| T4429 | 167-168 | -LRB- | denotes | ( |
| T4428 | 159-166 | NN | denotes | tubulin |
| T4427 | 155-158 | NN | denotes | α/β |
| T4426 | 151-154 | CC | denotes | and |
| T4425 | 149-150 | -RRB- | denotes | ) |
| T4424 | 144-149 | NN | denotes | GAPDH |
| T4423 | 143-144 | -LRB- | denotes | ( |
| T4422 | 129-142 | NN | denotes | dehydrogenase |
| T4421 | 102-128 | NN | denotes | glyceraldehyde-3-phosphate |
| T4420 | 100-101 | -COMMA- | denotes | , |
| T4419 | 99-100 | -RRB- | denotes | ) |
| T4418 | 84-99 | NNP | denotes | Biotechnologies |
| T4417 | 79-83 | NNP | denotes | Cruz |
| T4416 | 73-78 | NNP | denotes | Santa |
| T4415 | 72-73 | -LRB- | denotes | ( |
| T4414 | 70-71 | -RRB- | denotes | ) |
| T4413 | 64-70 | NN | denotes | sc-150 |
| T4412 | 63-64 | -LRB- | denotes | ( |
| T4411 | 55-62 | NN | denotes | C/EBP-β |
| T4410 | 53-54 | -COLON- | denotes | : |
| T4409 | 46-53 | VB | denotes | include |
| T4408 | 39-45 | NN | denotes | assays |
| T4407 | 34-38 | NN | denotes | blot |
| T4406 | 26-33 | JJ | denotes | western |
| T4405 | 22-25 | IN | denotes | for |
| T4404 | 17-21 | VB | denotes | used |
| T4403 | 6-16 | NN | denotes | antibodies |
| T4402 | 0-5 | JJ | denotes | Other |
| R3248 | T4403 | T4402 | arg1Of | antibodies,Other |
| R3249 | T4403 | T4404 | arg2Of | antibodies,used |
| R3250 | T4403 | T4409 | arg1Of | antibodies,include |
| R3251 | T4404 | T4405 | arg1Of | used,for |
| R3252 | T4408 | T4405 | arg2Of | assays,for |
| R3253 | T4408 | T4406 | arg1Of | assays,western |
| R3254 | T4408 | T4407 | arg1Of | assays,blot |
| R3255 | T4409 | T4410 | arg1Of | include,: |
| R3256 | T4411 | T4412 | arg1Of | C/EBP-β,( |
| R3257 | T4411 | T4415 | arg1Of | C/EBP-β,( |
| R3258 | T4411 | T4420 | arg1Of | C/EBP-β,"," |
| R3259 | T4413 | T4412 | arg2Of | sc-150,( |
| R3260 | T4414 | T4412 | arg3Of | ),( |
| R3261 | T4418 | T4415 | arg2Of | Biotechnologies,( |
| R3262 | T4418 | T4416 | arg1Of | Biotechnologies,Santa |
| R3263 | T4418 | T4417 | arg1Of | Biotechnologies,Cruz |
| R3264 | T4419 | T4415 | arg3Of | ),( |
| R3265 | T4420 | T4426 | arg1Of | ",",and |
| R3266 | T4422 | T4420 | arg2Of | dehydrogenase,"," |
| R3267 | T4422 | T4421 | arg1Of | dehydrogenase,glyceraldehyde-3-phosphate |
| R3268 | T4422 | T4423 | arg1Of | dehydrogenase,( |
| R3269 | T4424 | T4423 | arg2Of | GAPDH,( |
| R3270 | T4425 | T4423 | arg3Of | ),( |
| R3271 | T4426 | T4409 | arg2Of | and,include |
| R3272 | T4428 | T4426 | arg2Of | tubulin,and |
| R3273 | T4428 | T4427 | arg1Of | tubulin,α/β |
| R3274 | T4428 | T4429 | arg1Of | tubulin,( |
| R3275 | T4432 | T4429 | arg2Of | Technology,( |
| R3276 | T4432 | T4430 | arg1Of | Technology,Cell |
| R3277 | T4432 | T4431 | arg1Of | Technology,Signaling |
| R3278 | T4432 | T4433 | arg1Of | Technology,"," |
| R3279 | T4434 | T4433 | arg2Of | Inc.,"," |
| R3280 | T4435 | T4429 | arg3Of | ),( |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4273 | 144-149 | Protein | denotes | GAPDH |
| T4272 | 102-142 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase |
| T4271 | 55-62 | Protein | denotes | C/EBP-β |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4445 | 144-149 | http://www.uniprot.org/uniprot/P04406 | denotes | GAPDH |
| T4444 | 117-142 | http://www.uniprot.org/uniprot/P04406 | denotes | 3-phosphate dehydrogenase |
| T4443 | 55-62 | http://www.uniprot.org/uniprot/P28033 | denotes | C/EBP-β |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4276 | 6-16 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4285 | 6-16 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
| T4282 | 6-16 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4264 | 0-201 | Sentence | denotes | Other antibodies used for western blot assays include: C/EBP-β (sc-150) (Santa Cruz Biotechnologies), glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and α/β tubulin (Cell Signaling Technology, Inc.). |
| T56 | 0-201 | Sentence | denotes | Other antibodies used for western blot assays include: C/EBP-β (sc-150) (Santa Cruz Biotechnologies), glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and α/β tubulin (Cell Signaling Technology, Inc.). |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4293 | 144-149 | Protein | denotes | GAPDH |
| T4292 | 102-142 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase |
| T4291 | 55-62 | Protein | denotes | C/EBP-β |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4439 | 144-149 | Protein | denotes | GAPDH |
| T4438 | 102-142 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase |
| T4437 | 55-62 | Protein | denotes | C/EBP-β |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4459 | 144-149 | Protein | denotes | GAPDH |
| T4458 | 102-142 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase |
| T4457 | 55-62 | Protein | denotes | C/EBP-β |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4454 | 144-149 | Protein | denotes | GAPDH |
| T4453 | 102-142 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase |
| T4452 | 55-62 | Protein | denotes | C/EBP-β |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4498 | 144-149 | Protein | denotes | GAPDH |
| T4496 | 155-166 | Protein | denotes | α/β tubulin |
| T4492 | 168-172 | Entity | denotes | Cell |
| T4491 | 102-150 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase (GAPDH) |
| T4489 | 26-45 | Entity | denotes | western blot assays |
| T4487 | 55-71 | Protein | denotes | C/EBP-β (sc-150) |
| T4477 | 0-45 | Entity | denotes | Other antibodies used for western blot assays |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4468 | 155-166 | Protein | denotes | α/β tubulin |
| T4467 | 144-149 | Protein | denotes | GAPDH |
| T4466 | 102-142 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase |
| T4465 | 55-62 | Protein | denotes | C/EBP-β |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4250 | 144-149 | Protein | denotes | GAPDH |
| T4249 | 102-142 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase |
| T4248 | 55-62 | Protein | denotes | C/EBP-β |
| R3134 | T4250 | T4249 | equivalentTo | GAPDH,glyceraldehyde-3-phosphate dehydrogenase |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4258 | 144-149 | Protein | denotes | GAPDH |
| T4257 | 102-142 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase |
| T4256 | 55-62 | Protein | denotes | C/EBP-β |
| T4254 | 144-149 | Protein | denotes | GAPDH |
| T4253 | 102-142 | Protein | denotes | glyceraldehyde-3-phosphate dehydrogenase |
| T4252 | 55-62 | Protein | denotes | C/EBP-β |
| R3135 | T4258 | T4257 | equivalentTo | GAPDH,glyceraldehyde-3-phosphate dehydrogenase |