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PMC:3589482 / 679-952 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T913 262-270 NNS denotes elements
T912 251-261 JJ denotes regulatory
T911 240-250 JJ denotes functional
T910 229-239 RB denotes homologous
T909 225-228 IN denotes for
T908 220-224 NN denotes gene
T907 214-219 JJ denotes human
T906 210-213 DT denotes the
T905 207-209 IN denotes of
T904 198-206 NN denotes sequence
T903 194-197 DT denotes the
T902 189-193 IN denotes with
T901 180-188 NN denotes sequence
T900 171-179 NN denotes flanking
T899 169-170 NN denotes ′
T898 168-169 CD denotes 5
T897 161-167 NN denotes murine
T896 157-160 DT denotes the
T895 154-156 IN denotes of
T894 145-153 NN denotes sequence
T893 141-144 NNP denotes DNA
T892 137-140 DT denotes the
T891 128-136 VBD denotes compared
T890 125-127 PRP denotes we
T889 123-124 , denotes ,
T888 115-123 NN denotes addition
T887 112-114 IN denotes In
T886 110-111 . denotes .
T885 99-110 NNS denotes macrophages
T884 92-98 JJ denotes murine
T883 87-91 IN denotes into
T882 79-86 NNS denotes mutants
T881 70-78 NN denotes deletion
T880 62-69 JJ denotes several
T879 58-61 CC denotes and
T878 53-57 NN denotes gene
T877 44-52 NNP denotes SerpinB2
T876 37-43 NN denotes murine
T875 33-36 DT denotes the
T874 30-32 IN denotes of
T873 23-29 NN denotes region
T872 14-22 VBG denotes flanking
T871 13-14 : denotes -
T870 12-13 '' denotes '
T869 11-12 CD denotes 5
T868 8-10 NN denotes kb
T867 6-7 CD denotes 5
T866 5-6 NN denotes ∼
T865 1-4 DT denotes the
R452 T865 T873 det the,region
R453 T866 T868 nmod ∼,kb
R454 T867 T866 nummod 5,∼
R455 T868 T872 meta kb,flanking
R456 T869 T868 nummod 5,kb
R457 T870 T869 punct ',5
R458 T871 T872 punct -,flanking
R459 T872 T873 amod flanking,region
R461 T874 T873 prep of,region
R462 T875 T878 det the,gene
R463 T876 T878 compound murine,gene
R464 T877 T878 compound SerpinB2,gene
R465 T878 T874 pobj gene,of
R466 T879 T878 cc and,gene
R467 T880 T882 amod several,mutants
R468 T881 T882 compound deletion,mutants
R469 T882 T878 conj mutants,gene
R471 T884 T885 amod murine,macrophages
R472 T885 T883 pobj macrophages,into
R474 T887 T891 prep In,compared
R475 T888 T887 pobj addition,In
R476 T889 T891 punct ",",compared
R477 T890 T891 nsubj we,compared
R478 T891 T891 ROOT compared,compared
R479 T892 T894 det the,sequence
R480 T893 T894 compound DNA,sequence
R481 T894 T891 dobj sequence,compared
R482 T895 T894 prep of,sequence
R483 T896 T901 det the,sequence
R484 T897 T901 nmod murine,sequence
R485 T898 T897 nummod 5,murine
R486 T899 T901 compound ′,sequence
R487 T900 T901 compound flanking,sequence
R488 T901 T895 pobj sequence,of
R489 T902 T891 prep with,compared
R490 T903 T904 det the,sequence
R491 T904 T902 pobj sequence,with
R492 T905 T904 prep of,sequence
R493 T906 T908 det the,gene
R494 T907 T908 amod human,gene
R495 T908 T905 pobj gene,of
R496 T909 T908 prep for,gene
R497 T910 T911 advmod homologous,functional
R498 T911 T913 amod functional,elements
R499 T912 T913 amod regulatory,elements
R500 T913 T909 pobj elements,for

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T347 128-136 VB denotes compared
T346 125-127 PRP denotes we
T345 123-124 -COMMA- denotes ,
T344 115-123 NN denotes addition
T343 112-114 IN denotes In
T342 99-110 NN denotes macrophages
T341 92-98 JJ denotes murine
T340 87-91 IN denotes into
T339 79-86 NN denotes mutants
T338 70-78 NN denotes deletion
T337 62-69 JJ denotes several
T336 58-61 CC denotes and
T335 53-57 NN denotes gene
T334 44-52 NN denotes SerpinB2
T333 37-43 JJ denotes murine
T332 33-36 DT denotes the
T331 30-32 IN denotes of
T330 23-29 NN denotes region
T329 11-22 JJ denotes 5'-flanking
T328 8-10 NN denotes kb
T327 5-7 CD denotes ∼5
T326 1-4 DT denotes the
T368 262-270 NN denotes elements
T367 251-261 JJ denotes regulatory
T366 240-250 JJ denotes functional
T365 229-239 JJ denotes homologous
T364 225-228 IN denotes for
T363 220-224 NN denotes gene
T362 214-219 JJ denotes human
T361 210-213 DT denotes the
T360 207-209 IN denotes of
T359 198-206 NN denotes sequence
T358 194-197 DT denotes the
T357 189-193 IN denotes with
T356 180-188 NN denotes sequence
T355 171-179 NN denotes flanking
T354 168-170 NN denotes 5′
T353 161-167 JJ denotes murine
T352 157-160 DT denotes the
T351 154-156 IN denotes of
T350 145-153 NN denotes sequence
T349 141-144 NN denotes DNA
T348 137-140 DT denotes the
R138 T330 T326 arg1Of region,the
R139 T330 T327 arg1Of region,∼5
R140 T330 T328 arg1Of region,kb
R141 T330 T329 arg1Of region,5'-flanking
R142 T330 T331 arg1Of region,of
R143 T330 T340 arg1Of region,into
R144 T335 T332 arg1Of gene,the
R145 T335 T333 arg1Of gene,murine
R146 T335 T334 arg1Of gene,SerpinB2
R147 T335 T336 arg1Of gene,and
R148 T336 T331 arg2Of and,of
R149 T339 T336 arg2Of mutants,and
R150 T339 T337 arg1Of mutants,several
R151 T339 T338 arg1Of mutants,deletion
R152 T342 T340 arg2Of macrophages,into
R153 T342 T341 arg1Of macrophages,murine
R154 T344 T343 arg2Of addition,In
R155 T346 T347 arg1Of we,compared
R158 T350 T347 arg2Of sequence,compared
R159 T350 T348 arg1Of sequence,the
R160 T350 T349 arg1Of sequence,DNA
R161 T350 T351 arg1Of sequence,of
R162 T350 T357 arg1Of sequence,with
R163 T356 T351 arg2Of sequence,of
R164 T356 T352 arg1Of sequence,the
R165 T356 T353 arg1Of sequence,murine
R166 T356 T354 arg1Of sequence,5′
R167 T356 T355 arg1Of sequence,flanking
R168 T359 T357 arg2Of sequence,with
R169 T359 T358 arg1Of sequence,the
R170 T359 T360 arg1Of sequence,of
R171 T359 T364 arg1Of sequence,for
R172 T363 T360 arg2Of gene,of
R173 T363 T361 arg1Of gene,the
R174 T363 T362 arg1Of gene,human
R175 T368 T364 arg2Of elements,for
R176 T368 T365 arg1Of elements,homologous
R177 T368 T366 arg1Of elements,functional
R178 T368 T367 arg1Of elements,regulatory

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T166 44-52 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T533 44-52 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

simple1

Id Subject Object Predicate Lexical cue
T219 44-52 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T499 44-52 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T609 44-52 Protein denotes SerpinB2

DLUT931

Id Subject Object Predicate Lexical cue
T575 44-52 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T753 44-52 Protein denotes SerpinB2
T751 207-224 Protein denotes of the human gene
T722 141-144 Entity denotes DNA
T726 92-110 Entity denotes murine macrophages
T743 30-57 Protein denotes of the murine SerpinB2 gene

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T649 37-57 Protein denotes murine SerpinB2 gene

testone

Id Subject Object Predicate Lexical cue
T29 44-52 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T80 44-52 Protein denotes SerpinB2
T58 44-52 Protein denotes SerpinB2