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PMC:3589482 / 616-877 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T856 1-9 NN denotes promoter
T903 257-260 DT denotes the
T902 252-256 IN denotes with
T901 243-251 NN denotes sequence
T900 234-242 NN denotes flanking
T899 232-233 NN denotes ′
T898 231-232 CD denotes 5
T897 224-230 NN denotes murine
T896 220-223 DT denotes the
T895 217-219 IN denotes of
T894 208-216 NN denotes sequence
T893 204-207 NNP denotes DNA
T892 200-203 DT denotes the
T891 191-199 VBD denotes compared
T890 188-190 PRP denotes we
T889 186-187 , denotes ,
T888 178-186 NN denotes addition
T887 175-177 IN denotes In
T886 173-174 . denotes .
T885 162-173 NNS denotes macrophages
T884 155-161 JJ denotes murine
T883 150-154 IN denotes into
T882 142-149 NNS denotes mutants
T881 133-141 NN denotes deletion
T880 125-132 JJ denotes several
T879 121-124 CC denotes and
T878 116-120 NN denotes gene
T877 107-115 NNP denotes SerpinB2
T876 100-106 NN denotes murine
T875 96-99 DT denotes the
T874 93-95 IN denotes of
T873 86-92 NN denotes region
T872 77-85 VBG denotes flanking
T871 76-77 : denotes -
T870 75-76 '' denotes '
T869 74-75 CD denotes 5
T868 71-73 NN denotes kb
T867 69-70 CD denotes 5
T866 68-69 NN denotes ∼
T865 64-67 DT denotes the
T864 61-63 IN denotes by
T863 54-60 VBN denotes driven
T862 43-53 NNS denotes constructs
T861 34-42 NN denotes reporter
T860 22-33 VBD denotes transfected
T859 19-21 PRP denotes we
T858 17-18 , denotes ,
T857 10-17 NNS denotes regions
R443 T856 T857 compound promoter,regions
R445 T858 T860 punct ",",transfected
R446 T859 T860 nsubj we,transfected
R447 T860 T860 ROOT transfected,transfected
R448 T861 T862 compound reporter,constructs
R449 T862 T860 dobj constructs,transfected
R450 T863 T862 acl driven,constructs
R451 T864 T863 agent by,driven
R452 T865 T873 det the,region
R453 T866 T868 nmod ∼,kb
R454 T867 T866 nummod 5,∼
R455 T868 T872 meta kb,flanking
R456 T869 T868 nummod 5,kb
R457 T870 T869 punct ',5
R458 T871 T872 punct -,flanking
R459 T872 T873 amod flanking,region
R460 T873 T864 pobj region,by
R461 T874 T873 prep of,region
R462 T875 T878 det the,gene
R463 T876 T878 compound murine,gene
R464 T877 T878 compound SerpinB2,gene
R465 T878 T874 pobj gene,of
R466 T879 T878 cc and,gene
R467 T880 T882 amod several,mutants
R468 T881 T882 compound deletion,mutants
R469 T882 T878 conj mutants,gene
R470 T883 T863 prep into,driven
R471 T884 T885 amod murine,macrophages
R472 T885 T883 pobj macrophages,into
R473 T886 T860 punct .,transfected
R474 T887 T891 prep In,compared
R475 T888 T887 pobj addition,In
R476 T889 T891 punct ",",compared
R477 T890 T891 nsubj we,compared
R478 T891 T891 ROOT compared,compared
R479 T892 T894 det the,sequence
R480 T893 T894 compound DNA,sequence
R481 T894 T891 dobj sequence,compared
R482 T895 T894 prep of,sequence
R483 T896 T901 det the,sequence
R484 T897 T901 nmod murine,sequence
R485 T898 T897 nummod 5,murine
R486 T899 T901 compound ′,sequence
R487 T900 T901 compound flanking,sequence
R488 T901 T895 pobj sequence,of
R489 T902 T891 prep with,compared

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T347 191-199 VB denotes compared
T346 188-190 PRP denotes we
T345 186-187 -COMMA- denotes ,
T344 178-186 NN denotes addition
T343 175-177 IN denotes In
T342 162-173 NN denotes macrophages
T341 155-161 JJ denotes murine
T340 150-154 IN denotes into
T339 142-149 NN denotes mutants
T338 133-141 NN denotes deletion
T337 125-132 JJ denotes several
T336 121-124 CC denotes and
T335 116-120 NN denotes gene
T334 107-115 NN denotes SerpinB2
T333 100-106 JJ denotes murine
T332 96-99 DT denotes the
T331 93-95 IN denotes of
T330 86-92 NN denotes region
T329 74-85 JJ denotes 5'-flanking
T328 71-73 NN denotes kb
T327 68-70 CD denotes ∼5
T326 64-67 DT denotes the
T325 61-63 IN denotes by
T324 54-60 VB denotes driven
T323 43-53 NN denotes constructs
T322 34-42 NN denotes reporter
T321 22-33 VB denotes transfected
T320 19-21 PRP denotes we
T319 17-18 -COMMA- denotes ,
T318 10-17 NN denotes regions
T317 1-9 NN denotes promoter
T358 257-260 DT denotes the
T357 252-256 IN denotes with
T356 243-251 NN denotes sequence
T355 234-242 NN denotes flanking
T354 231-233 NN denotes 5′
T353 224-230 JJ denotes murine
T352 220-223 DT denotes the
T351 217-219 IN denotes of
T350 208-216 NN denotes sequence
T349 204-207 NN denotes DNA
T348 200-203 DT denotes the
R128 T318 T317 arg1Of regions,promoter
R130 T320 T321 arg1Of we,transfected
R132 T321 T319 arg1Of transfected,","
R133 T323 T321 arg2Of constructs,transfected
R134 T323 T322 arg1Of constructs,reporter
R135 T323 T324 arg2Of constructs,driven
R136 T330 T324 arg1Of region,driven
R137 T330 T325 arg2Of region,by
R138 T330 T326 arg1Of region,the
R139 T330 T327 arg1Of region,∼5
R140 T330 T328 arg1Of region,kb
R141 T330 T329 arg1Of region,5'-flanking
R142 T330 T331 arg1Of region,of
R143 T330 T340 arg1Of region,into
R144 T335 T332 arg1Of gene,the
R145 T335 T333 arg1Of gene,murine
R146 T335 T334 arg1Of gene,SerpinB2
R147 T335 T336 arg1Of gene,and
R148 T336 T331 arg2Of and,of
R149 T339 T336 arg2Of mutants,and
R150 T339 T337 arg1Of mutants,several
R151 T339 T338 arg1Of mutants,deletion
R152 T342 T340 arg2Of macrophages,into
R153 T342 T341 arg1Of macrophages,murine
R154 T344 T343 arg2Of addition,In
R155 T346 T347 arg1Of we,compared
R158 T350 T347 arg2Of sequence,compared
R159 T350 T348 arg1Of sequence,the
R160 T350 T349 arg1Of sequence,DNA
R161 T350 T351 arg1Of sequence,of
R162 T350 T357 arg1Of sequence,with
R163 T356 T351 arg2Of sequence,of
R164 T356 T352 arg1Of sequence,the
R165 T356 T353 arg1Of sequence,murine
R166 T356 T354 arg1Of sequence,5′
R167 T356 T355 arg1Of sequence,flanking

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T166 107-115 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T533 107-115 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

simple1

Id Subject Object Predicate Lexical cue
T219 107-115 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T499 107-115 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T609 107-115 Protein denotes SerpinB2

DLUT931

Id Subject Object Predicate Lexical cue
T575 107-115 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T753 107-115 Protein denotes SerpinB2
T722 204-207 Entity denotes DNA
T726 155-173 Entity denotes murine macrophages
T743 93-120 Protein denotes of the murine SerpinB2 gene

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T649 100-120 Protein denotes murine SerpinB2 gene

testone

Id Subject Object Predicate Lexical cue
T29 107-115 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T80 107-115 Protein denotes SerpinB2
T58 107-115 Protein denotes SerpinB2