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PMC:3589482 / 60-243 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T773 13-26 NN denotes Transcription
T774 27-29 IN denotes of
T775 30-36 NNP denotes Murine
T776 37-45 NNP denotes SerpinB2
T790 173-175 IN denotes in
T789 165-172 VBN denotes induced
T788 158-164 RB denotes highly
T787 155-157 VBZ denotes is
T786 153-154 -RRB- denotes )
T785 148-153 NN denotes PAI-2
T784 147-148 -LRB- denotes (
T783 145-146 CD denotes 2
T782 140-144 NN denotes type
T781 130-139 NN denotes inhibitor
T780 120-129 NN denotes activator
T779 108-119 NN denotes plasminogen
T778 105-107 CC denotes or
T777 96-104 NNP denotes SerpinB2
R360 T773 T789 nsubjpass Transcription,induced
R361 T774 T773 prep of,Transcription
R362 T775 T777 compound Murine,SerpinB2
R363 T776 T777 compound SerpinB2,SerpinB2
R364 T777 T774 pobj SerpinB2,of
R365 T778 T777 cc or,SerpinB2
R366 T779 T773 conj plasminogen,Transcription
R367 T780 T781 amod activator,inhibitor
R368 T781 T782 compound inhibitor,type
R369 T782 T773 appos type,Transcription
R370 T783 T782 nummod 2,type
R371 T784 T782 punct (,type
R372 T785 T782 appos PAI-2,type
R373 T786 T782 punct ),type
R374 T787 T789 auxpass is,induced
R375 T788 T789 advmod highly,induced
R376 T789 T789 ROOT induced,induced
R377 T790 T789 prep in,induced

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T239 30-36 NNP denotes Murine
T240 37-45 NN denotes SerpinB2
T254 173-175 IN denotes in
T253 165-172 VB denotes induced
T252 158-164 RB denotes highly
T251 155-157 VB denotes is
T250 153-154 -RRB- denotes )
T249 148-153 NN denotes PAI-2
T248 147-148 -LRB- denotes (
T247 145-146 CD denotes 2
T246 140-144 NN denotes type
T245 130-139 NN denotes inhibitor
T244 120-129 NN denotes activator
T243 108-119 NN denotes plasminogen
T242 105-107 CC denotes or
T241 96-104 NN denotes SerpinB2
T237 13-26 NN denotes Transcription
T238 27-29 IN denotes of
R47 T240 T238 arg2Of SerpinB2,of
R48 T240 T239 arg1Of SerpinB2,Murine
R49 T241 T242 arg1Of SerpinB2,or
R50 T243 T242 arg2Of plasminogen,or
R51 T246 T241 arg1Of type,SerpinB2
R52 T246 T243 arg1Of type,plasminogen
R53 T246 T244 arg1Of type,activator
R54 T246 T245 arg1Of type,inhibitor
R55 T246 T247 arg1Of type,2
R56 T246 T248 arg1Of type,(
R57 T246 T251 arg1Of type,is
R58 T246 T253 arg2Of type,induced
R61 T249 T248 arg2Of PAI-2,(
R62 T250 T248 arg3Of ),(
R63 T253 T251 arg2Of induced,is
R64 T253 T252 arg1Of induced,highly
R65 T253 T254 arg1Of induced,in
R675 T237 T238 arg1Of Transcription,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T158 37-45 Protein denotes SerpinB2
T159 96-104 Protein denotes SerpinB2
T160 108-146 Protein denotes plasminogen activator inhibitor type 2
T161 148-153 Protein denotes PAI-2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T530 96-104 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T537 145-151 http://www.uniprot.org/uniprot/P05120 denotes 2 (PAI
T529 37-45 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

GO-BP

Id Subject Object Predicate Lexical cue
T177 13-26 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T178 108-129 http://purl.obolibrary.org/obo/GO_0031639 denotes plasminogen activator

sentences

Id Subject Object Predicate Lexical cue
T2 46-85 Sentence denotes C/EBP-β Mediates SerpinB2 Transcription
T3 87-95 Sentence denotes Abstract

simple1

Id Subject Object Predicate Lexical cue
T212 96-104 Protein denotes SerpinB2
T213 108-146 Protein denotes plasminogen activator inhibitor type 2
T214 148-153 Protein denotes PAI-2
T211 37-45 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T511 13-26 Transcription denotes Transcription
T512 165-172 Positive_regulation denotes induced
T492 37-45 Protein denotes SerpinB2
T493 96-104 Protein denotes SerpinB2
T494 108-146 Protein denotes plasminogen activator inhibitor type 2
T495 148-153 Protein denotes PAI-2
R676 T492 T511 themeOf SerpinB2,Transcription
R677 T493 T512 themeOf SerpinB2,induced
R678 T494 T512 themeOf plasminogen activator inhibitor type 2,induced
R679 T495 T512 themeOf PAI-2,induced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T602 37-45 Protein denotes SerpinB2
T620 13-26 Transcription denotes Transcription
T603 96-104 Protein denotes SerpinB2
T604 108-146 Protein denotes plasminogen activator inhibitor type 2
T605 148-153 Protein denotes PAI-2
T622 165-172 Positive_regulation denotes induced
R715 T602 T620 themeOf SerpinB2,Transcription
R717 T604 T622 themeOf plasminogen activator inhibitor type 2,induced

DLUT931

Id Subject Object Predicate Lexical cue
T568 37-45 Protein denotes SerpinB2
T586 13-26 Transcription denotes Transcription
T569 96-104 Protein denotes SerpinB2
T570 108-146 Protein denotes plasminogen activator inhibitor type 2
T571 148-153 Protein denotes PAI-2
T589 165-172 Positive_regulation denotes induced
R684 T570 T589 themeOf plasminogen activator inhibitor type 2,induced
R682 T568 T586 themeOf SerpinB2,Transcription
R683 T569 T589 themeOf SerpinB2,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T749 27-45 Protein denotes of Murine SerpinB2
T739 148-153 Protein denotes PAI-2
T740 96-154 Protein denotes SerpinB2 or plasminogen activator inhibitor type 2 (PAI-2)
T744 108-154 Protein denotes plasminogen activator inhibitor type 2 (PAI-2)

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T643 165-172 Positive_regulation denotes induced
T642 165-172 Positive_regulation denotes induced
T640 148-153 Protein denotes PAI-2
T636 30-45 Protein denotes Murine SerpinB2
T637 13-26 Transcription denotes Transcription
T639 108-146 Protein denotes plasminogen activator inhibitor type 2
R322 T640 T643 themeOf PAI-2,induced
R704 T636 T637 themeOf Murine SerpinB2,Transcription
R706 T639 T642 themeOf plasminogen activator inhibitor type 2,induced

testone

Id Subject Object Predicate Lexical cue
T21 37-45 Protein denotes SerpinB2
T24 148-153 Protein denotes PAI-2
T23 108-146 Protein denotes plasminogen activator inhibitor type 2
T22 96-104 Protein denotes SerpinB2
R1 T24 T23 equivalentTo PAI-2,plasminogen activator inhibitor type 2

test3

Id Subject Object Predicate Lexical cue
T50 37-45 Protein denotes SerpinB2
T69 37-45 Protein denotes SerpinB2
T73 165-172 Positive_regulation denotes induced
T72 148-153 Protein denotes PAI-2
T71 108-146 Protein denotes plasminogen activator inhibitor type 2
T70 96-104 Protein denotes SerpinB2
T53 148-153 Protein denotes PAI-2
T52 108-146 Protein denotes plasminogen activator inhibitor type 2
T51 96-104 Protein denotes SerpinB2
R15 T71 T73 themeOf plasminogen activator inhibitor type 2,induced
R16 T72 T71 equivalentTo PAI-2,plasminogen activator inhibitor type 2