
PMC:3589482 / 5913-8488
Annnotations
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4551 | 2571-2572 | -RRB- | denotes | ) |
T4550 | 2561-2571 | NNP | denotes | Invitrogen |
T4549 | 2560-2561 | -LRB- | denotes | ( |
T4548 | 2555-2559 | NNS | denotes | gels |
T4547 | 2548-2554 | NNP | denotes | NuPAGE |
T4546 | 2539-2547 | NNP | denotes | Bis-Tris |
T4545 | 2537-2538 | NN | denotes | % |
T4544 | 2535-2537 | CD | denotes | 12 |
T4543 | 2533-2534 | CD | denotes | 4 |
T4542 | 2530-2532 | IN | denotes | on |
T4541 | 2520-2529 | VBN | denotes | separated |
T4540 | 2515-2519 | VBD | denotes | were |
T4539 | 2506-2514 | NNS | denotes | proteins |
T4538 | 2504-2505 | , | denotes | , |
T4537 | 2503-2504 | -RRB- | denotes | ) |
T4536 | 2500-2503 | NNP | denotes | SDS |
T4535 | 2498-2499 | NN | denotes | % |
T4534 | 2495-2498 | CD | denotes | 0.1 |
T4533 | 2493-2494 | , | denotes | , |
T4532 | 2481-2493 | NN | denotes | deoxycholate |
T4531 | 2479-2480 | NN | denotes | % |
T4530 | 2476-2479 | CD | denotes | 0.5 |
T4529 | 2474-2475 | , | denotes | , |
T4528 | 2469-2474 | NN | denotes | NP-40 |
T4527 | 2467-2468 | NN | denotes | % |
T4526 | 2464-2467 | CD | denotes | 0.5 |
T4525 | 2462-2463 | , | denotes | , |
T4524 | 2457-2462 | NNP | denotes | X-100 |
T4523 | 2450-2456 | NNP | denotes | Triton |
T4522 | 2449-2450 | NN | denotes | % |
T4521 | 2448-2449 | CD | denotes | 1 |
T4520 | 2446-2447 | , | denotes | , |
T4519 | 2442-2446 | NNP | denotes | NaCl |
T4518 | 2439-2441 | NNP | denotes | mM |
T4517 | 2435-2438 | CD | denotes | 150 |
T4516 | 2433-2434 | , | denotes | , |
T4515 | 2429-2433 | NNP | denotes | Tris |
T4514 | 2426-2428 | NNP | denotes | mM |
T4513 | 2423-2425 | CD | denotes | 10 |
T4512 | 2422-2423 | -LRB- | denotes | ( |
T4511 | 2415-2421 | NN | denotes | buffer |
T4510 | 2410-2414 | NNP | denotes | RIPA |
T4509 | 2407-2409 | IN | denotes | in |
T4508 | 2398-2406 | VBN | denotes | prepared |
T4239 | 2351-2352 | . | denotes | . |
T4238 | 2343-2351 | CD | denotes | AF339731 |
T4237 | 2341-2342 | . | denotes | . |
T4236 | 2339-2341 | NNP | denotes | No |
T4235 | 2329-2338 | NNP | denotes | Accession |
T4234 | 2324-2328 | IN | denotes | with |
T4233 | 2319-2323 | NNP | denotes | Bank |
T4232 | 2314-2318 | NNP | denotes | Data |
T4231 | 2296-2313 | NNP | denotes | GenBank/EMBL/DDBJ |
T4230 | 2293-2295 | IN | denotes | in |
T4229 | 2283-2292 | VBN | denotes | deposited |
T4228 | 2279-2282 | VBD | denotes | was |
T4227 | 2270-2278 | NN | denotes | sequence |
T4226 | 2265-2269 | DT | denotes | This |
T4225 | 2263-2264 | . | denotes | . |
T4224 | 2262-2263 | -RRB- | denotes | ) |
T4223 | 2250-2262 | NNP | denotes | Perkin-Elmer |
T4222 | 2249-2250 | -LRB- | denotes | ( |
T4221 | 2239-2248 | NN | denotes | sequencer |
T4220 | 2234-2238 | NNP | denotes | 373A |
T4219 | 2231-2233 | NNP | denotes | PE |
T4218 | 2229-2230 | DT | denotes | a |
T4217 | 2225-2228 | CC | denotes | and |
T4216 | 2223-2224 | -RRB- | denotes | ) |
T4215 | 2211-2223 | NNP | denotes | Perkin-Elmer |
T4214 | 2210-2211 | -LRB- | denotes | ( |
T4213 | 2206-2209 | NN | denotes | kit |
T4212 | 2197-2205 | NN | denotes | reaction |
T4211 | 2191-2196 | JJ | denotes | ready |
T4210 | 2180-2190 | VBG | denotes | sequencing |
T4209 | 2174-2179 | NN | denotes | cycle |
T4208 | 2163-2173 | NN | denotes | terminator |
T4207 | 2159-2162 | NN | denotes | dye |
T4206 | 2153-2158 | NNP | denotes | PRISM |
T4205 | 2149-2152 | NNP | denotes | ABI |
T4204 | 2145-2148 | DT | denotes | the |
T4203 | 2139-2144 | VBG | denotes | using |
T4202 | 2128-2138 | VBN | denotes | determined |
T4201 | 2124-2127 | VBD | denotes | was |
T4200 | 2117-2123 | NN | denotes | region |
T4199 | 2108-2116 | NN | denotes | flanking |
T4198 | 2106-2107 | NN | denotes | ′ |
T4197 | 2105-2106 | CD | denotes | 5 |
T4196 | 2100-2104 | NN | denotes | gene |
T4195 | 2091-2099 | NNP | denotes | SerpinB2 |
T4194 | 2084-2090 | NN | denotes | murine |
T4193 | 2081-2083 | NN | denotes | bp |
T4192 | 2076-2080 | CD | denotes | 4480 |
T4191 | 2072-2075 | DT | denotes | the |
T4190 | 2069-2071 | IN | denotes | of |
T4189 | 2060-2068 | NN | denotes | sequence |
T4188 | 2049-2059 | NN | denotes | nucleotide |
T4187 | 2045-2048 | DT | denotes | The |
T4186 | 2043-2044 | . | denotes | . |
T4185 | 2033-2043 | NN | denotes | sequencing |
T4184 | 2029-2032 | NN | denotes | DNA |
T4183 | 2025-2028 | CC | denotes | and |
T4182 | 2015-2024 | NN | denotes | digestion |
T4181 | 2008-2014 | NN | denotes | enzyme |
T4180 | 1996-2007 | NN | denotes | restriction |
T4179 | 1993-1995 | IN | denotes | by |
T4178 | 1984-1992 | VBN | denotes | verified |
T4177 | 1979-1983 | VBD | denotes | were |
T4176 | 1971-1978 | NNS | denotes | inserts |
T4175 | 1961-1970 | VBN | denotes | Subcloned |
T4174 | 1959-1960 | . | denotes | . |
T4173 | 1947-1959 | NNS | denotes | orientations |
T4172 | 1938-1946 | JJ | denotes | opposite |
T4171 | 1935-1937 | IN | denotes | in |
T4170 | 1928-1934 | VBN | denotes | cloned |
T4169 | 1926-1927 | , | denotes | , |
T4168 | 1918-1926 | NN | denotes | fragment |
T4167 | 1912-1917 | NNP | denotes | EcoRI |
T4166 | 1904-1911 | NNP | denotes | pDB9406 |
T4165 | 1900-1903 | DT | denotes | the |
T4164 | 1897-1899 | IN | denotes | of |
T4163 | 1888-1896 | RB | denotes | upstream |
T4162 | 1876-1887 | RB | denotes | immediately |
T4161 | 1868-1875 | VBN | denotes | located |
T4160 | 1866-1867 | , | denotes | , |
T4159 | 1858-1866 | NN | denotes | fragment |
T4158 | 1850-1857 | JJ | denotes | genomic |
T4157 | 1844-1849 | NNP | denotes | EcoRI |
T4156 | 1841-1843 | NN | denotes | kb |
T4155 | 1837-1840 | CD | denotes | 1.2 |
T4154 | 1835-1836 | DT | denotes | a |
T4153 | 1827-1834 | VBP | denotes | contain |
T4152 | 1816-1826 | NN | denotes | pDB9402-42 |
T4151 | 1812-1815 | CC | denotes | and |
T4150 | 1801-1811 | NN | denotes | pDB9402-41 |
T4149 | 1799-1800 | : | denotes | ; |
T4148 | 1795-1799 | NN | denotes | site |
T4147 | 1784-1794 | NN | denotes | initiation |
T4146 | 1770-1783 | NN | denotes | transcription |
T4145 | 1766-1769 | DT | denotes | the |
T4144 | 1757-1765 | VBG | denotes | spanning |
T4143 | 1748-1756 | NN | denotes | fragment |
T4142 | 1740-1747 | JJ | denotes | genomic |
T4141 | 1729-1739 | NNP | denotes | EcoRI/SpeI |
T4140 | 1726-1728 | NN | denotes | kb |
T4139 | 1722-1725 | CD | denotes | 4.4 |
T4138 | 1720-1721 | DT | denotes | a |
T4137 | 1711-1719 | VBZ | denotes | contains |
T4136 | 1703-1710 | JJ | denotes | pDB9406 |
T4135 | 1701-1702 | . | denotes | . |
T4134 | 1695-1701 | NNP | denotes | Geneva |
T4133 | 1692-1694 | IN | denotes | of |
T4132 | 1681-1691 | NNP | denotes | University |
T4131 | 1679-1680 | , | denotes | , |
T4130 | 1674-1679 | NNP | denotes | Belin |
T4129 | 1664-1673 | NNP | denotes | Dominique |
T4128 | 1660-1663 | NNP | denotes | Dr. |
T4127 | 1657-1659 | IN | denotes | by |
T4126 | 1648-1656 | VBN | denotes | provided |
T4125 | 1641-1647 | RB | denotes | kindly |
T4124 | 1636-1640 | VBD | denotes | were |
T4123 | 1634-1635 | , | denotes | , |
T4122 | 1628-1634 | NN | denotes | strain |
T4121 | 1622-1627 | NN | denotes | mouse |
T4552 | 2572-2573 | , | denotes | , |
T4120 | 1618-1621 | CD | denotes | 129 |
T4119 | 1616-1617 | DT | denotes | a |
T4118 | 1611-1615 | IN | denotes | from |
T4117 | 1602-1610 | VBN | denotes | prepared |
T4116 | 1594-1601 | NN | denotes | library |
T4115 | 1586-1593 | JJ | denotes | genomic |
T4114 | 1584-1585 | -RRB- | denotes | ) |
T4113 | 1574-1584 | NNP | denotes | Stratagene |
T4112 | 1573-1574 | -LRB- | denotes | ( |
T4111 | 1566-1572 | NNP | denotes | λFIXII |
T4110 | 1564-1565 | DT | denotes | a |
T4109 | 1559-1563 | IN | denotes | from |
T4108 | 1550-1558 | VBD | denotes | isolated |
T4107 | 1546-1549 | NNP | denotes | DNA |
T4106 | 1538-1545 | JJ | denotes | genomic |
T4105 | 1527-1537 | VBG | denotes | containing |
T4104 | 1516-1526 | NNP | denotes | pDB9402-42 |
T4103 | 1512-1515 | CC | denotes | and |
T4102 | 1501-1511 | NNP | denotes | pDB9402-41 |
T4101 | 1499-1500 | , | denotes | , |
T4100 | 1492-1499 | NNP | denotes | pDB9406 |
T4099 | 1483-1491 | NNP | denotes | Plasmids |
T4098 | 1481-1482 | . | denotes | . |
T4097 | 1472-1481 | NN | denotes | digestion |
T4096 | 1468-1471 | NNP | denotes | III |
T4095 | 1456-1467 | NN | denotes | exonuclease |
T4063 | 1228-1236 | NN | denotes | sequence |
T4062 | 1224-1227 | NNP | denotes | DNA |
T4061 | 1220-1223 | NNP | denotes | The |
T4060 | 1211-1219 | NNP | denotes | Analysis |
T4059 | 1202-1210 | NNP | denotes | Sequence |
T3794 | 1195-1196 | . | denotes | . |
T3793 | 1194-1195 | -RRB- | denotes | ) |
T3792 | 1184-1194 | NNPS | denotes | Biosystems |
T3791 | 1176-1183 | NNP | denotes | Applied |
T3790 | 1175-1176 | -LRB- | denotes | ( |
T3789 | 1173-1174 | -RRB- | denotes | ) |
T3788 | 1160-1173 | NNP | denotes | Mm00607939_s1 |
T3787 | 1159-1160 | -LRB- | denotes | ( |
T3786 | 1151-1158 | JJ | denotes | β-actin |
T3785 | 1147-1150 | CC | denotes | and |
T3784 | 1145-1146 | -RRB- | denotes | ) |
T3783 | 1132-1145 | NNP | denotes | Mm00843434_s1 |
T3782 | 1131-1132 | -LRB- | denotes | ( |
T3781 | 1125-1130 | NNP | denotes | Cebpb |
T3780 | 1123-1124 | , | denotes | , |
T3779 | 1122-1123 | -RRB- | denotes | ) |
T3778 | 1109-1122 | NNP | denotes | Mm00440905_m1 |
T3777 | 1108-1109 | -LRB- | denotes | ( |
T3776 | 1090-1107 | NNP | denotes | Serpinb2/SerpinB2 |
T3775 | 1086-1089 | IN | denotes | for |
T3774 | 1078-1085 | NNS | denotes | primers |
T3773 | 1074-1077 | NNP | denotes | 20X |
T3772 | 1063-1073 | NNP | denotes | Expression |
T3771 | 1058-1062 | NNP | denotes | Gene |
T3770 | 1056-1057 | NNP | denotes | ® |
T3769 | 1050-1056 | NNP | denotes | TaqMan |
T3768 | 1044-1049 | VBG | denotes | using |
T3767 | 1034-1043 | VBN | denotes | performed |
T3766 | 1030-1033 | VBD | denotes | was |
T3765 | 1025-1029 | NNP | denotes | qPCR |
T3764 | 1023-1024 | . | denotes | . |
T3763 | 1022-1023 | -RRB- | denotes | ) |
T3762 | 1012-1022 | NNPS | denotes | Biosystems |
T3761 | 1004-1011 | NNP | denotes | Applied |
T3760 | 1003-1004 | -LRB- | denotes | ( |
T3759 | 994-1002 | NNP | denotes | Reagents |
T3758 | 980-993 | NNP | denotes | Transcription |
T3757 | 972-979 | VB | denotes | Reverse |
T3756 | 970-971 | NNP | denotes | ® |
T3755 | 964-970 | NNP | denotes | TaqMan |
T3754 | 958-963 | VBG | denotes | using |
T3753 | 946-957 | VBN | denotes | transcribed |
T3752 | 938-945 | JJ | denotes | reverse |
T3751 | 934-937 | VBD | denotes | was |
T3750 | 930-933 | NNP | denotes | RNA |
T3749 | 924-929 | JJ | denotes | total |
T3748 | 921-923 | IN | denotes | of |
T3747 | 918-920 | NN | denotes | µg |
T3746 | 916-917 | CD | denotes | 1 |
T3745 | 914-915 | , | denotes | , |
T3744 | 905-914 | NN | denotes | synthesis |
T3743 | 900-904 | NNP | denotes | cDNA |
T3742 | 896-899 | IN | denotes | For |
T3741 | 894-895 | . | denotes | . |
T3740 | 889-894 | NNS | denotes | cells |
T3739 | 884-888 | IN | denotes | from |
T3738 | 880-883 | NNP | denotes | RNA |
T3737 | 874-879 | JJ | denotes | total |
T3736 | 866-873 | VB | denotes | isolate |
T3735 | 863-865 | TO | denotes | to |
T3734 | 858-862 | VBN | denotes | used |
T3733 | 854-857 | VBD | denotes | was |
T3732 | 852-853 | -RRB- | denotes | ) |
T3731 | 846-852 | NNP | denotes | Qiagen |
T3730 | 845-846 | -LRB- | denotes | ( |
T3729 | 841-844 | NNP | denotes | Kit |
T3728 | 836-840 | NNP | denotes | Mini |
T3727 | 829-835 | NNP | denotes | RNeasy |
T3726 | 825-828 | DT | denotes | The |
T3725 | 823-824 | -RRB- | denotes | ) |
T3724 | 819-823 | NNP | denotes | qPCR |
T3723 | 818-819 | -LRB- | denotes | ( |
T3722 | 814-817 | NNP | denotes | PCR |
T3721 | 801-813 | JJ | denotes | Quantitative |
T3720 | 791-800 | JJ | denotes | Real-time |
T4094 | 1453-1455 | IN | denotes | by |
T4093 | 1442-1452 | VBN | denotes | introduced |
T4092 | 1432-1441 | NNS | denotes | deletions |
T4091 | 1421-1431 | VBG | denotes | containing |
T4090 | 1410-1420 | NN | denotes | pDB9402-42 |
T4089 | 1406-1409 | CC | denotes | and |
T4088 | 1395-1405 | NN | denotes | pDB9402-41 |
T4087 | 1390-1394 | IN | denotes | from |
T4086 | 1381-1389 | VBN | denotes | prepared |
T4085 | 1372-1380 | NNS | denotes | plasmids |
T4084 | 1369-1371 | TO | denotes | to |
T4083 | 1360-1368 | NN | denotes | addition |
T4082 | 1357-1359 | IN | denotes | in |
T4081 | 1355-1356 | , | denotes | , |
T4080 | 1345-1355 | NNP | denotes | pDB9402-42 |
T4079 | 1341-1344 | CC | denotes | and |
T4078 | 1330-1340 | NNP | denotes | pDB9402-41 |
T4077 | 1328-1329 | , | denotes | , |
T4076 | 1321-1328 | NNP | denotes | pDB9406 |
T4075 | 1312-1320 | NNS | denotes | plasmids |
T4074 | 1302-1311 | JJ | denotes | pUC-based |
T4073 | 1298-1301 | DT | denotes | the |
T4072 | 1287-1297 | VBG | denotes | sequencing |
T4071 | 1284-1286 | IN | denotes | by |
T4070 | 1273-1283 | VBN | denotes | determined |
T4069 | 1269-1272 | VBD | denotes | was |
T4068 | 1260-1268 | NN | denotes | promoter |
T4067 | 1251-1259 | NNP | denotes | SerpinB2 |
T4066 | 1244-1250 | NN | denotes | murine |
T4065 | 1240-1243 | DT | denotes | the |
T4064 | 1237-1239 | IN | denotes | of |
T3561 | 788-789 | . | denotes | . |
T3560 | 783-788 | NNP | denotes | Sigma |
T3559 | 778-782 | IN | denotes | from |
T3558 | 769-777 | VBN | denotes | obtained |
T3557 | 765-768 | VBD | denotes | was |
T3556 | 763-764 | -RRB- | denotes | ) |
T3555 | 758-763 | NNP | denotes | Re595 |
T3554 | 751-757 | NNP | denotes | Strain |
T3553 | 741-750 | NN | denotes | minnesota |
T3552 | 730-740 | NN | denotes | Salmonella |
T3551 | 729-730 | -LRB- | denotes | ( |
T3550 | 727-728 | -RRB- | denotes | ) |
T3549 | 724-727 | NNP | denotes | LPS |
T3548 | 723-724 | -LRB- | denotes | ( |
T3547 | 704-722 | NN | denotes | lipopolysaccharide |
T3546 | 694-703 | JJ | denotes | Bacterial |
T3545 | 692-693 | . | denotes | . |
T3544 | 691-692 | -RRB- | denotes | ) |
T3543 | 686-691 | NNP | denotes | Lonza |
T3542 | 685-686 | -LRB- | denotes | ( |
T3541 | 681-684 | NNP | denotes | Kit |
T3540 | 671-680 | NNP | denotes | Detection |
T3539 | 661-670 | NNP | denotes | MycoAlert |
T3538 | 657-660 | DT | denotes | the |
T3537 | 653-656 | CC | denotes | and |
T3536 | 651-652 | -RRB- | denotes | ) |
T3535 | 646-651 | NNP | denotes | Sigma |
T3534 | 645-646 | -LRB- | denotes | ( |
T3533 | 639-644 | CD | denotes | 33258 |
T3532 | 633-638 | VB | denotes | stain |
T3531 | 625-632 | NNP | denotes | Hoechst |
T3530 | 619-624 | VBG | denotes | using |
T3529 | 610-618 | NN | denotes | staining |
T3528 | 602-609 | JJ | denotes | nuclear |
T3527 | 599-601 | IN | denotes | by |
T3526 | 589-598 | NN | denotes | infection |
T3525 | 578-588 | NNP | denotes | Mycoplasma |
T3524 | 570-577 | VB | denotes | exclude |
T3523 | 567-569 | TO | denotes | to |
T3522 | 559-566 | VBN | denotes | checked |
T3521 | 549-558 | RB | denotes | routinely |
T3520 | 544-548 | VBD | denotes | were |
T3519 | 535-543 | NNS | denotes | cultures |
T3518 | 531-534 | DT | denotes | All |
T3517 | 529-530 | . | denotes | . |
T3516 | 523-529 | NN | denotes | method |
T3515 | 513-522 | NN | denotes | exclusion |
T3514 | 509-512 | NN | denotes | dye |
T3513 | 507-508 | -RRB- | denotes | ) |
T3512 | 502-507 | NNP | denotes | Sigma |
T3511 | 501-502 | -LRB- | denotes | ( |
T3477 | 285-290 | NNS | denotes | media |
T3476 | 276-284 | CD | denotes | DMEM/F12 |
T3475 | 274-275 | NN | denotes | % |
T3474 | 272-274 | CD | denotes | 50 |
T3473 | 269-271 | IN | denotes | in |
T3472 | 258-268 | VBD | denotes | maintained |
T3471 | 254-257 | CC | denotes | and |
T3470 | 252-253 | , | denotes | , |
T3469 | 247-252 | RB | denotes | later |
T3468 | 242-246 | NNS | denotes | days |
T3467 | 240-241 | CD | denotes | 5 |
T3466 | 238-239 | CD | denotes | 3 |
T3465 | 231-237 | NN | denotes | lavage |
T3464 | 220-230 | JJ | denotes | peritoneal |
T3463 | 217-219 | IN | denotes | by |
T3462 | 208-216 | VBN | denotes | followed |
T3461 | 202-207 | NN | denotes | broth |
T3460 | 187-201 | NN | denotes | thioglycollate |
T3459 | 185-186 | NN | denotes | % |
T3458 | 184-185 | CD | denotes | 3 |
T3457 | 179-183 | IN | denotes | with |
T3456 | 174-178 | NNS | denotes | mice |
T3455 | 166-173 | NNP | denotes | C57BL/6 |
T3454 | 156-165 | VBG | denotes | injecting |
T3453 | 153-155 | IN | denotes | by |
T3452 | 144-152 | VBN | denotes | obtained |
T3451 | 139-143 | VBD | denotes | were |
T3450 | 127-138 | NNS | denotes | macrophages |
T3449 | 116-126 | JJ | denotes | peritoneal |
T3448 | 108-115 | JJ | denotes | Primary |
T3447 | 106-107 | . | denotes | . |
T3446 | 105-106 | -RRB- | denotes | ) |
T3445 | 98-105 | NNP | denotes | Cellgro |
T3444 | 97-98 | -LRB- | denotes | ( |
T3443 | 88-96 | NN | denotes | solution |
T3442 | 54-87 | JJ | denotes | penicillin/streptomycin/glutamate |
T3441 | 52-53 | NN | denotes | % |
T3440 | 51-52 | CD | denotes | 1 |
T3439 | 47-50 | CC | denotes | and |
T3438 | 41-46 | NN | denotes | serum |
T3437 | 34-40 | JJ | denotes | bovine |
T3436 | 28-33 | JJ | denotes | fetal |
T3435 | 26-27 | NN | denotes | % |
T3434 | 24-26 | CD | denotes | 10 |
T3433 | 19-23 | IN | denotes | with |
T3432 | 6-18 | VBN | denotes | supplemented |
T3431 | 4-5 | -RRB- | denotes | ) |
T3510 | 496-500 | NN | denotes | blue |
T3509 | 489-495 | NN | denotes | trypan |
T3508 | 485-488 | DT | denotes | the |
T3507 | 479-484 | VBG | denotes | using |
T3506 | 468-478 | VBN | denotes | determined |
T3505 | 464-467 | VBD | denotes | was |
T3504 | 454-463 | NN | denotes | viability |
T3503 | 449-453 | NNP | denotes | Cell |
T3502 | 447-448 | . | denotes | . |
T3501 | 442-447 | NN | denotes | serum |
T3500 | 433-441 | JJ | denotes | LPS-free |
T3499 | 423-432 | VBN | denotes | certified |
T3498 | 420-422 | IN | denotes | of |
T3497 | 416-419 | NN | denotes | use |
T3496 | 412-415 | DT | denotes | the |
T3495 | 404-411 | IN | denotes | through |
T3494 | 395-403 | NNS | denotes | cultures |
T3493 | 390-394 | NN | denotes | cell |
T3492 | 386-389 | DT | denotes | all |
T3491 | 381-385 | IN | denotes | from |
T3490 | 367-380 | NN | denotes | contamination |
T3489 | 348-366 | NN | denotes | lipopolysaccharide |
T3488 | 338-347 | JJ | denotes | bacterial |
T3487 | 330-337 | VB | denotes | exclude |
T3486 | 327-329 | TO | denotes | to |
T3481 | 301-302 | -RRB- | denotes | ) |
T3480 | 298-301 | NNP | denotes | BRL |
T3479 | 292-297 | NNP | denotes | Gibco |
T3478 | 291-292 | -LRB- | denotes | ( |
T4507 | 2393-2397 | VBD | denotes | were |
T4506 | 2385-2392 | NNS | denotes | lysates |
T4505 | 2380-2384 | NN | denotes | cell |
T4504 | 2374-2379 | NNP | denotes | Whole |
T4503 | 2367-2373 | NNP | denotes | Assays |
T4502 | 2362-2366 | NNP | denotes | Blot |
T4501 | 2354-2361 | JJ | denotes | Western |
T4058 | 1198-1201 | NNP | denotes | DNA |
T3485 | 321-326 | VBN | denotes | taken |
T3484 | 316-320 | VBD | denotes | were |
T3483 | 304-315 | NNS | denotes | Precautions |
T3482 | 302-303 | . | denotes | . |
R2493 | T3433 | T3432 | prep | with,supplemented |
R2494 | T3434 | T3435 | nummod | 10,% |
R2495 | T3435 | T3438 | nmod | %,serum |
R2496 | T3436 | T3438 | amod | fetal,serum |
R2497 | T3437 | T3438 | amod | bovine,serum |
R2498 | T3438 | T3433 | pobj | serum,with |
R2499 | T3439 | T3438 | cc | and,serum |
R2500 | T3440 | T3441 | nummod | 1,% |
R2501 | T3441 | T3443 | nmod | %,solution |
R2502 | T3442 | T3443 | amod | penicillin/streptomycin/glutamate,solution |
R2503 | T3443 | T3438 | conj | solution,serum |
R2504 | T3444 | T3445 | punct | (,Cellgro |
R2505 | T3445 | T3443 | appos | Cellgro,solution |
R2506 | T3446 | T3445 | punct | ),Cellgro |
R2508 | T3448 | T3450 | amod | Primary,macrophages |
R2509 | T3449 | T3450 | amod | peritoneal,macrophages |
R2510 | T3450 | T3452 | nsubjpass | macrophages,obtained |
R2511 | T3451 | T3452 | auxpass | were,obtained |
R2512 | T3452 | T3452 | ROOT | obtained,obtained |
R2513 | T3453 | T3452 | prep | by,obtained |
R2514 | T3454 | T3453 | pcomp | injecting,by |
R2515 | T3455 | T3456 | compound | C57BL/6,mice |
R2516 | T3456 | T3454 | dobj | mice,injecting |
R2517 | T3457 | T3454 | prep | with,injecting |
R2518 | T3458 | T3459 | nummod | 3,% |
R2519 | T3459 | T3461 | nmod | %,broth |
R2520 | T3460 | T3461 | compound | thioglycollate,broth |
R2521 | T3461 | T3457 | pobj | broth,with |
R2522 | T3462 | T3461 | acl | followed,broth |
R2523 | T3463 | T3462 | agent | by,followed |
R2524 | T3464 | T3465 | amod | peritoneal,lavage |
R2525 | T3465 | T3463 | pobj | lavage,by |
R2526 | T3466 | T3465 | nummod | 3,lavage |
R2527 | T3467 | T3468 | nummod | 5,days |
R2528 | T3468 | T3469 | npadvmod | days,later |
R2529 | T3469 | T3462 | advmod | later,followed |
R2530 | T3470 | T3452 | punct | ",",obtained |
R2531 | T3471 | T3452 | cc | and,obtained |
R2532 | T3472 | T3452 | conj | maintained,obtained |
R2533 | T3473 | T3472 | prep | in,maintained |
R2534 | T3474 | T3475 | nummod | 50,% |
R2535 | T3475 | T3473 | pobj | %,in |
R2536 | T3476 | T3477 | nummod | DMEM/F12,media |
R2537 | T3477 | T3473 | pobj | media,in |
R2538 | T3478 | T3480 | punct | (,BRL |
R2539 | T3479 | T3480 | compound | Gibco,BRL |
R2540 | T3480 | T3472 | appos | BRL,maintained |
R2541 | T3481 | T3480 | punct | ),BRL |
R2542 | T3482 | T3452 | punct | .,obtained |
R2543 | T3483 | T3485 | nsubjpass | Precautions,taken |
R2544 | T3484 | T3485 | auxpass | were,taken |
R2545 | T3485 | T3485 | ROOT | taken,taken |
R2546 | T3486 | T3487 | aux | to,exclude |
R2547 | T3487 | T3485 | advcl | exclude,taken |
R2548 | T3488 | T3490 | amod | bacterial,contamination |
R2549 | T3489 | T3490 | compound | lipopolysaccharide,contamination |
R2550 | T3490 | T3487 | dobj | contamination,exclude |
R2551 | T3491 | T3490 | prep | from,contamination |
R2552 | T3492 | T3494 | det | all,cultures |
R2553 | T3493 | T3494 | compound | cell,cultures |
R2554 | T3494 | T3491 | pobj | cultures,from |
R2555 | T3495 | T3487 | prep | through,exclude |
R2556 | T3496 | T3497 | det | the,use |
R2557 | T3497 | T3495 | pobj | use,through |
R2558 | T3498 | T3497 | prep | of,use |
R2559 | T3499 | T3501 | amod | certified,serum |
R2560 | T3500 | T3501 | amod | LPS-free,serum |
R2561 | T3501 | T3498 | pobj | serum,of |
R2562 | T3502 | T3485 | punct | .,taken |
R2563 | T3503 | T3504 | compound | Cell,viability |
R2564 | T3504 | T3506 | nsubjpass | viability,determined |
R2565 | T3505 | T3506 | auxpass | was,determined |
R2566 | T3506 | T3506 | ROOT | determined,determined |
R2567 | T3507 | T3506 | advcl | using,determined |
R2568 | T3508 | T3510 | det | the,blue |
R2569 | T3509 | T3510 | compound | trypan,blue |
R2570 | T3510 | T3516 | nmod | blue,method |
R2571 | T3511 | T3510 | punct | (,blue |
R2572 | T3512 | T3510 | appos | Sigma,blue |
R2573 | T3513 | T3510 | punct | ),blue |
R2574 | T3514 | T3515 | compound | dye,exclusion |
R2575 | T3515 | T3516 | compound | exclusion,method |
R2576 | T3516 | T3507 | dobj | method,using |
R2577 | T3517 | T3506 | punct | .,determined |
R2578 | T3518 | T3519 | det | All,cultures |
R2579 | T3519 | T3522 | nsubjpass | cultures,checked |
R2580 | T3520 | T3522 | auxpass | were,checked |
R2581 | T3521 | T3522 | advmod | routinely,checked |
R2582 | T3522 | T3522 | ROOT | checked,checked |
R2583 | T3523 | T3524 | aux | to,exclude |
R2584 | T3524 | T3522 | xcomp | exclude,checked |
R2585 | T3525 | T3526 | compound | Mycoplasma,infection |
R2586 | T3526 | T3524 | dobj | infection,exclude |
R2587 | T3527 | T3526 | prep | by,infection |
R2588 | T3528 | T3529 | amod | nuclear,staining |
R2589 | T3529 | T3527 | pobj | staining,by |
R2590 | T3530 | T3524 | advcl | using,exclude |
R2591 | T3531 | T3532 | nsubj | Hoechst,stain |
R2592 | T3532 | T3530 | xcomp | stain,using |
R2593 | T3533 | T3535 | nummod | 33258,Sigma |
R2594 | T3534 | T3535 | punct | (,Sigma |
R2595 | T3535 | T3524 | npadvmod | Sigma,exclude |
R2596 | T3536 | T3535 | punct | ),Sigma |
R2597 | T3537 | T3535 | cc | and,Sigma |
R2598 | T3538 | T3541 | det | the,Kit |
R2599 | T3539 | T3541 | compound | MycoAlert,Kit |
R2600 | T3540 | T3541 | compound | Detection,Kit |
R2601 | T3541 | T3535 | conj | Kit,Sigma |
R2602 | T3542 | T3541 | punct | (,Kit |
R2603 | T3543 | T3541 | appos | Lonza,Kit |
R2604 | T3544 | T3541 | punct | ),Kit |
R2605 | T3545 | T3522 | punct | .,checked |
R2606 | T3546 | T3547 | amod | Bacterial,lipopolysaccharide |
R2607 | T3547 | T3558 | nsubjpass | lipopolysaccharide,obtained |
R2608 | T3548 | T3549 | punct | (,LPS |
R2609 | T3549 | T3547 | appos | LPS,lipopolysaccharide |
R2610 | T3550 | T3547 | punct | ),lipopolysaccharide |
R2611 | T3551 | T3555 | punct | (,Re595 |
R2612 | T3552 | T3555 | compound | Salmonella,Re595 |
R2613 | T3553 | T3555 | compound | minnesota,Re595 |
R2614 | T3554 | T3555 | compound | Strain,Re595 |
R2615 | T3555 | T3547 | appos | Re595,lipopolysaccharide |
R2616 | T3556 | T3555 | punct | ),Re595 |
R2617 | T3557 | T3558 | auxpass | was,obtained |
R2618 | T3558 | T3558 | ROOT | obtained,obtained |
R2619 | T3559 | T3558 | prep | from,obtained |
R2620 | T3560 | T3559 | pobj | Sigma,from |
R2621 | T3561 | T3558 | punct | .,obtained |
R2699 | T3720 | T3722 | amod | Real-time,PCR |
R2700 | T3721 | T3722 | compound | Quantitative,PCR |
R2701 | T3722 | T3722 | ROOT | PCR,PCR |
R2702 | T3723 | T3724 | punct | (,qPCR |
R2703 | T3724 | T3722 | appos | qPCR,PCR |
R2704 | T3725 | T3722 | punct | ),PCR |
R2705 | T3726 | T3729 | det | The,Kit |
R2706 | T3727 | T3729 | compound | RNeasy,Kit |
R2707 | T3728 | T3729 | compound | Mini,Kit |
R2708 | T3729 | T3734 | nsubjpass | Kit,used |
R2709 | T3730 | T3729 | punct | (,Kit |
R2710 | T3731 | T3729 | appos | Qiagen,Kit |
R2711 | T3732 | T3729 | punct | ),Kit |
R2712 | T3733 | T3734 | auxpass | was,used |
R2713 | T3734 | T3734 | ROOT | used,used |
R2714 | T3735 | T3736 | aux | to,isolate |
R2715 | T3736 | T3734 | xcomp | isolate,used |
R2716 | T3737 | T3738 | amod | total,RNA |
R2717 | T3738 | T3736 | dobj | RNA,isolate |
R2718 | T3739 | T3736 | prep | from,isolate |
R2719 | T3740 | T3739 | pobj | cells,from |
R2720 | T3741 | T3734 | punct | .,used |
R2721 | T3742 | T3751 | prep | For,was |
R2722 | T3743 | T3744 | compound | cDNA,synthesis |
R2723 | T3744 | T3742 | pobj | synthesis,For |
R2724 | T3745 | T3751 | punct | ",",was |
R2725 | T3746 | T3747 | nummod | 1,µg |
R2726 | T3747 | T3751 | nsubj | µg,was |
R2727 | T3748 | T3747 | prep | of,µg |
R2728 | T3749 | T3750 | amod | total,RNA |
R2729 | T3750 | T3748 | pobj | RNA,of |
R2730 | T3751 | T3751 | ROOT | was,was |
R2731 | T3752 | T3753 | advmod | reverse,transcribed |
R2732 | T3753 | T3751 | conj | transcribed,was |
R2733 | T3754 | T3753 | advcl | using,transcribed |
R2734 | T3755 | T3756 | compound | TaqMan,® |
R2735 | T3756 | T3757 | nsubj | ®,Reverse |
R2736 | T3757 | T3754 | xcomp | Reverse,using |
R2737 | T3758 | T3759 | compound | Transcription,Reagents |
R2738 | T3759 | T3757 | dobj | Reagents,Reverse |
R2739 | T3760 | T3762 | punct | (,Biosystems |
R2740 | T3761 | T3762 | compound | Applied,Biosystems |
R2741 | T3762 | T3759 | appos | Biosystems,Reagents |
R2742 | T3763 | T3762 | punct | ),Biosystems |
R2743 | T3764 | T3757 | punct | .,Reverse |
R2744 | T3765 | T3767 | nsubjpass | qPCR,performed |
R2745 | T3766 | T3767 | auxpass | was,performed |
R2746 | T3767 | T3767 | ROOT | performed,performed |
R2747 | T3768 | T3767 | advcl | using,performed |
R2748 | T3769 | T3773 | compound | TaqMan,20X |
R2749 | T3770 | T3773 | compound | ®,20X |
R2750 | T3771 | T3773 | compound | Gene,20X |
R2751 | T3772 | T3773 | compound | Expression,20X |
R2752 | T3773 | T3774 | compound | 20X,primers |
R2753 | T3774 | T3768 | dobj | primers,using |
R2754 | T3775 | T3768 | prep | for,using |
R2755 | T3776 | T3775 | pobj | Serpinb2/SerpinB2,for |
R2756 | T3777 | T3778 | punct | (,Mm00440905_m1 |
R2757 | T3778 | T3776 | appos | Mm00440905_m1,Serpinb2/SerpinB2 |
R2758 | T3779 | T3776 | punct | ),Serpinb2/SerpinB2 |
R2759 | T3780 | T3776 | punct | ",",Serpinb2/SerpinB2 |
R2760 | T3781 | T3776 | conj | Cebpb,Serpinb2/SerpinB2 |
R2761 | T3782 | T3783 | punct | (,Mm00843434_s1 |
R2762 | T3783 | T3781 | appos | Mm00843434_s1,Cebpb |
R2763 | T3784 | T3783 | punct | ),Mm00843434_s1 |
R2764 | T3785 | T3781 | cc | and,Cebpb |
R2765 | T3786 | T3781 | conj | β-actin,Cebpb |
R2766 | T3787 | T3786 | punct | (,β-actin |
R2767 | T3788 | T3786 | appos | Mm00607939_s1,β-actin |
R2768 | T3789 | T3786 | punct | ),β-actin |
R2769 | T3790 | T3792 | punct | (,Biosystems |
R2770 | T3791 | T3792 | compound | Applied,Biosystems |
R2771 | T3792 | T3786 | appos | Biosystems,β-actin |
R2772 | T3793 | T3767 | punct | ),performed |
R2773 | T3794 | T3767 | punct | .,performed |
R2952 | T4058 | T4060 | compound | DNA,Analysis |
R2953 | T4059 | T4060 | compound | Sequence,Analysis |
R2954 | T4060 | T4070 | nsubjpass | Analysis,determined |
R2955 | T4061 | T4063 | det | The,sequence |
R2956 | T4062 | T4063 | compound | DNA,sequence |
R2957 | T4063 | T4060 | appos | sequence,Analysis |
R2958 | T4064 | T4063 | prep | of,sequence |
R2959 | T4065 | T4068 | det | the,promoter |
R2960 | T4066 | T4068 | compound | murine,promoter |
R2961 | T4067 | T4068 | compound | SerpinB2,promoter |
R2962 | T4068 | T4064 | pobj | promoter,of |
R2963 | T4069 | T4070 | auxpass | was,determined |
R2964 | T4070 | T4070 | ROOT | determined,determined |
R2965 | T4071 | T4070 | prep | by,determined |
R2966 | T4072 | T4071 | pcomp | sequencing,by |
R2967 | T4073 | T4075 | det | the,plasmids |
R2968 | T4074 | T4075 | amod | pUC-based,plasmids |
R2969 | T4075 | T4072 | dobj | plasmids,sequencing |
R2970 | T4076 | T4072 | npadvmod | pDB9406,sequencing |
R2971 | T4077 | T4076 | punct | ",",pDB9406 |
R2972 | T4078 | T4076 | conj | pDB9402-41,pDB9406 |
R2973 | T4079 | T4078 | cc | and,pDB9402-41 |
R2974 | T4080 | T4078 | conj | pDB9402-42,pDB9402-41 |
R2975 | T4081 | T4072 | punct | ",",sequencing |
R2976 | T4082 | T4072 | prep | in,sequencing |
R2977 | T4083 | T4082 | pobj | addition,in |
R2978 | T4084 | T4083 | prep | to,addition |
R2979 | T4085 | T4084 | pobj | plasmids,to |
R2980 | T4086 | T4085 | acl | prepared,plasmids |
R2981 | T4087 | T4086 | prep | from,prepared |
R2982 | T4088 | T4087 | pobj | pDB9402-41,from |
R2983 | T4089 | T4088 | cc | and,pDB9402-41 |
R2984 | T4090 | T4088 | conj | pDB9402-42,pDB9402-41 |
R2985 | T4091 | T4085 | prep | containing,plasmids |
R2986 | T4092 | T4091 | dobj | deletions,containing |
R2987 | T4093 | T4092 | acl | introduced,deletions |
R2988 | T4094 | T4093 | agent | by,introduced |
R2989 | T4095 | T4097 | amod | exonuclease,digestion |
R2990 | T4096 | T4097 | compound | III,digestion |
R2991 | T4097 | T4094 | pobj | digestion,by |
R2992 | T4098 | T4070 | punct | .,determined |
R2993 | T4099 | T4100 | compound | Plasmids,pDB9406 |
R2994 | T4100 | T4100 | ROOT | pDB9406,pDB9406 |
R2995 | T4101 | T4100 | punct | ",",pDB9406 |
R2996 | T4102 | T4100 | conj | pDB9402-41,pDB9406 |
R2997 | T4103 | T4102 | cc | and,pDB9402-41 |
R2998 | T4104 | T4102 | conj | pDB9402-42,pDB9402-41 |
R2999 | T4105 | T4108 | prep | containing,isolated |
R3000 | T4106 | T4107 | compound | genomic,DNA |
R3001 | T4107 | T4108 | nsubj | DNA,isolated |
R3002 | T4108 | T4108 | ROOT | isolated,isolated |
R3003 | T4109 | T4108 | prep | from,isolated |
R3004 | T4110 | T4111 | det | a,λFIXII |
R3005 | T4111 | T4116 | nmod | λFIXII,library |
R3006 | T4112 | T4111 | punct | (,λFIXII |
R3007 | T4113 | T4111 | appos | Stratagene,λFIXII |
R3008 | T4114 | T4111 | punct | ),λFIXII |
R3009 | T4115 | T4116 | amod | genomic,library |
R3010 | T4116 | T4109 | pobj | library,from |
R3011 | T4117 | T4108 | advcl | prepared,isolated |
R3012 | T4118 | T4117 | prep | from,prepared |
R3013 | T4119 | T4122 | det | a,strain |
R3014 | T4120 | T4122 | nummod | 129,strain |
R3015 | T4121 | T4122 | compound | mouse,strain |
R3016 | T4122 | T4118 | pobj | strain,from |
R3017 | T4123 | T4108 | punct | ",",isolated |
R3018 | T4124 | T4126 | auxpass | were,provided |
R3019 | T4125 | T4126 | advmod | kindly,provided |
R3020 | T4126 | T4108 | advcl | provided,isolated |
R3021 | T4127 | T4126 | agent | by,provided |
R3022 | T4128 | T4130 | compound | Dr.,Belin |
R3023 | T4129 | T4130 | compound | Dominique,Belin |
R3024 | T4130 | T4127 | pobj | Belin,by |
R3025 | T4131 | T4130 | punct | ",",Belin |
R3026 | T4132 | T4130 | conj | University,Belin |
R3027 | T4133 | T4132 | prep | of,University |
R3028 | T4134 | T4133 | pobj | Geneva,of |
R3029 | T4135 | T4108 | punct | .,isolated |
R3030 | T4136 | T4137 | nsubj | pDB9406,contains |
R3031 | T4137 | T4153 | ccomp | contains,contain |
R3032 | T4138 | T4143 | det | a,fragment |
R3033 | T4139 | T4140 | nummod | 4.4,kb |
R3034 | T4140 | T4143 | nmod | kb,fragment |
R3035 | T4141 | T4143 | nmod | EcoRI/SpeI,fragment |
R3036 | T4142 | T4143 | compound | genomic,fragment |
R3037 | T4143 | T4137 | dobj | fragment,contains |
R3038 | T4144 | T4143 | acl | spanning,fragment |
R3039 | T4145 | T4148 | det | the,site |
R3040 | T4146 | T4147 | compound | transcription,initiation |
R3041 | T4147 | T4148 | compound | initiation,site |
R3042 | T4148 | T4144 | dobj | site,spanning |
R3043 | T4149 | T4153 | punct | ;,contain |
R3044 | T4150 | T4153 | nsubj | pDB9402-41,contain |
R3045 | T4151 | T4150 | cc | and,pDB9402-41 |
R3046 | T4152 | T4150 | conj | pDB9402-42,pDB9402-41 |
R3047 | T4153 | T4153 | ROOT | contain,contain |
R3048 | T4154 | T4159 | det | a,fragment |
R3049 | T4155 | T4156 | nummod | 1.2,kb |
R3050 | T4156 | T4159 | nmod | kb,fragment |
R3051 | T4157 | T4159 | nmod | EcoRI,fragment |
R3052 | T4158 | T4159 | compound | genomic,fragment |
R3053 | T4159 | T4153 | dobj | fragment,contain |
R3054 | T4160 | T4159 | punct | ",",fragment |
R3055 | T4161 | T4159 | acl | located,fragment |
R3056 | T4162 | T4163 | advmod | immediately,upstream |
R3057 | T4163 | T4161 | advmod | upstream,located |
R3058 | T4164 | T4163 | prep | of,upstream |
R3059 | T4165 | T4168 | det | the,fragment |
R3060 | T4166 | T4167 | compound | pDB9406,EcoRI |
R3061 | T4167 | T4168 | compound | EcoRI,fragment |
R3062 | T4168 | T4164 | pobj | fragment,of |
R3063 | T4169 | T4161 | punct | ",",located |
R3064 | T4170 | T4159 | acl | cloned,fragment |
R3065 | T4171 | T4170 | prep | in,cloned |
R3066 | T4172 | T4173 | amod | opposite,orientations |
R3067 | T4173 | T4171 | pobj | orientations,in |
R3068 | T4174 | T4153 | punct | .,contain |
R3069 | T4175 | T4176 | amod | Subcloned,inserts |
R3070 | T4176 | T4178 | nsubjpass | inserts,verified |
R3071 | T4177 | T4178 | auxpass | were,verified |
R3072 | T4178 | T4178 | ROOT | verified,verified |
R3073 | T4179 | T4178 | agent | by,verified |
R3074 | T4180 | T4181 | compound | restriction,enzyme |
R3075 | T4181 | T4182 | compound | enzyme,digestion |
R3076 | T4182 | T4179 | pobj | digestion,by |
R3077 | T4183 | T4182 | cc | and,digestion |
R3078 | T4184 | T4185 | compound | DNA,sequencing |
R3079 | T4185 | T4182 | conj | sequencing,digestion |
R3080 | T4186 | T4178 | punct | .,verified |
R3081 | T4187 | T4189 | det | The,sequence |
R3082 | T4188 | T4189 | compound | nucleotide,sequence |
R3083 | T4189 | T4202 | nsubjpass | sequence,determined |
R3084 | T4190 | T4189 | prep | of,sequence |
R3085 | T4191 | T4196 | det | the,gene |
R3086 | T4192 | T4196 | nummod | 4480,gene |
R3087 | T4193 | T4196 | nmod | bp,gene |
R3088 | T4194 | T4196 | compound | murine,gene |
R3089 | T4195 | T4196 | compound | SerpinB2,gene |
R3090 | T4196 | T4200 | nmod | gene,region |
R3091 | T4197 | T4198 | nummod | 5,′ |
R3092 | T4198 | T4200 | amod | ′,region |
R3093 | T4199 | T4200 | amod | flanking,region |
R3094 | T4200 | T4190 | pobj | region,of |
R3095 | T4201 | T4202 | auxpass | was,determined |
R3096 | T4202 | T4202 | ROOT | determined,determined |
R3097 | T4203 | T4202 | advcl | using,determined |
R3098 | T4204 | T4209 | det | the,cycle |
R3099 | T4205 | T4209 | compound | ABI,cycle |
R3100 | T4206 | T4209 | compound | PRISM,cycle |
R3101 | T4207 | T4208 | compound | dye,terminator |
R3102 | T4208 | T4209 | compound | terminator,cycle |
R3103 | T4209 | T4203 | dobj | cycle,using |
R3104 | T4210 | T4203 | conj | sequencing,using |
R3105 | T4211 | T4213 | amod | ready,kit |
R3106 | T4212 | T4213 | compound | reaction,kit |
R3107 | T4213 | T4210 | dobj | kit,sequencing |
R3108 | T4214 | T4213 | punct | (,kit |
R3109 | T4215 | T4210 | conj | Perkin-Elmer,sequencing |
R3110 | T4216 | T4215 | punct | ),Perkin-Elmer |
R3111 | T4217 | T4210 | cc | and,sequencing |
R3112 | T4218 | T4221 | det | a,sequencer |
R3113 | T4219 | T4221 | compound | PE,sequencer |
R3114 | T4220 | T4221 | compound | 373A,sequencer |
R3115 | T4221 | T4210 | conj | sequencer,sequencing |
R3116 | T4222 | T4221 | punct | (,sequencer |
R3117 | T4223 | T4221 | appos | Perkin-Elmer,sequencer |
R3118 | T4224 | T4221 | punct | ),sequencer |
R3119 | T4225 | T4202 | punct | .,determined |
R3120 | T4226 | T4227 | det | This,sequence |
R3121 | T4227 | T4229 | nsubjpass | sequence,deposited |
R3122 | T4228 | T4229 | auxpass | was,deposited |
R3123 | T4229 | T4229 | ROOT | deposited,deposited |
R3124 | T4230 | T4229 | prep | in,deposited |
R3125 | T4231 | T4233 | compound | GenBank/EMBL/DDBJ,Bank |
R3126 | T4232 | T4233 | compound | Data,Bank |
R3127 | T4233 | T4230 | pobj | Bank,in |
R3128 | T4234 | T4229 | prep | with,deposited |
R3129 | T4235 | T4236 | compound | Accession,No |
R3130 | T4236 | T4234 | pobj | No,with |
R3131 | T4237 | T4229 | punct | .,deposited |
R3132 | T4238 | T4238 | ROOT | AF339731,AF339731 |
R3133 | T4239 | T4238 | punct | .,AF339731 |
R3322 | T4532 | T4528 | appos | deoxycholate,NP-40 |
R3323 | T4533 | T4532 | punct | ",",deoxycholate |
R3324 | T4534 | T4535 | nummod | 0.1,% |
R3325 | T4535 | T4536 | compound | %,SDS |
R3326 | T4536 | T4532 | appos | SDS,deoxycholate |
R3327 | T4537 | T4536 | punct | ),SDS |
R3328 | T4538 | T4541 | punct | ",",separated |
R3329 | T4539 | T4541 | nsubjpass | proteins,separated |
R3330 | T4540 | T4541 | auxpass | were,separated |
R3331 | T4541 | T4541 | ROOT | separated,separated |
R3332 | T4542 | T4541 | prep | on,separated |
R3333 | T4543 | T4542 | pobj | 4,on |
R3334 | T4544 | T4545 | nummod | 12,% |
R3335 | T4545 | T4548 | compound | %,gels |
R3336 | T4546 | T4547 | compound | Bis-Tris,NuPAGE |
R3337 | T4547 | T4548 | compound | NuPAGE,gels |
R3338 | T4548 | T4541 | appos | gels,separated |
R3339 | T4549 | T4550 | punct | (,Invitrogen |
R3340 | T4550 | T4548 | appos | Invitrogen,gels |
R3341 | T4551 | T4548 | punct | ),gels |
R3342 | T4552 | T4541 | punct | ",",separated |
R3291 | T4501 | T4506 | amod | Western,lysates |
R3292 | T4502 | T4506 | compound | Blot,lysates |
R3293 | T4503 | T4506 | compound | Assays,lysates |
R3294 | T4504 | T4506 | compound | Whole,lysates |
R3295 | T4505 | T4506 | compound | cell,lysates |
R3296 | T4506 | T4508 | nsubjpass | lysates,prepared |
R3297 | T4507 | T4508 | auxpass | were,prepared |
R3298 | T4508 | T4541 | ccomp | prepared,separated |
R3299 | T4509 | T4508 | prep | in,prepared |
R3300 | T4510 | T4511 | compound | RIPA,buffer |
R3301 | T4511 | T4509 | pobj | buffer,in |
R3302 | T4512 | T4515 | punct | (,Tris |
R3303 | T4513 | T4515 | nummod | 10,Tris |
R3304 | T4514 | T4515 | compound | mM,Tris |
R3305 | T4515 | T4541 | nsubjpass | Tris,separated |
R3306 | T4516 | T4515 | punct | ",",Tris |
R3307 | T4517 | T4519 | nummod | 150,NaCl |
R3308 | T4518 | T4519 | compound | mM,NaCl |
R3309 | T4519 | T4515 | appos | NaCl,Tris |
R3310 | T4520 | T4519 | punct | ",",NaCl |
R3311 | T4521 | T4522 | nummod | 1,% |
R3312 | T4522 | T4524 | compound | %,X-100 |
R3313 | T4523 | T4524 | compound | Triton,X-100 |
R3314 | T4524 | T4519 | conj | X-100,NaCl |
R3315 | T4525 | T4524 | punct | ",",X-100 |
R3316 | T4526 | T4527 | nummod | 0.5,% |
R3317 | T4527 | T4528 | compound | %,NP-40 |
R3318 | T4528 | T4524 | appos | NP-40,X-100 |
R3319 | T4529 | T4528 | punct | ",",NP-40 |
R3320 | T4530 | T4531 | nummod | 0.5,% |
R3321 | T4531 | T4532 | compound | %,deoxycholate |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4344 | 2572-2573 | -COMMA- | denotes | , |
T4343 | 2571-2572 | -RRB- | denotes | ) |
T4342 | 2561-2571 | NN | denotes | Invitrogen |
T4341 | 2560-2561 | -LRB- | denotes | ( |
T4340 | 2555-2559 | NN | denotes | gels |
T4339 | 2548-2554 | NN | denotes | NuPAGE |
T4338 | 2539-2547 | JJ | denotes | Bis-Tris |
T4337 | 2537-2538 | NN | denotes | % |
T4336 | 2533-2537 | CD | denotes | 4–12 |
T4310 | 2435-2438 | CD | denotes | 150 |
T4309 | 2433-2434 | -COMMA- | denotes | , |
T4308 | 2429-2433 | NNP | denotes | Tris |
T4307 | 2426-2428 | NN | denotes | mM |
T4306 | 2423-2425 | CD | denotes | 10 |
T4305 | 2422-2423 | -LRB- | denotes | ( |
T4304 | 2415-2421 | NN | denotes | buffer |
T4303 | 2410-2414 | NN | denotes | RIPA |
T4302 | 2407-2409 | IN | denotes | in |
T4301 | 2398-2406 | VB | denotes | prepared |
T4300 | 2393-2397 | VB | denotes | were |
T4299 | 2385-2392 | NN | denotes | lysates |
T4298 | 2380-2384 | NN | denotes | cell |
T4297 | 2374-2379 | JJ | denotes | Whole |
T4296 | 2367-2373 | NN | denotes | Assays |
T4295 | 2362-2366 | NNP | denotes | Blot |
T4294 | 2354-2361 | NNP | denotes | Western |
T4008 | 2343-2351 | NN | denotes | AF339731 |
T4007 | 2339-2342 | NNP | denotes | No. |
T4006 | 2329-2338 | NNP | denotes | Accession |
T4005 | 2324-2328 | IN | denotes | with |
T4004 | 2319-2323 | NNP | denotes | Bank |
T4003 | 2314-2318 | NNP | denotes | Data |
T4002 | 2296-2313 | NNP | denotes | GenBank/EMBL/DDBJ |
T4001 | 2293-2295 | IN | denotes | in |
T4000 | 2283-2292 | VB | denotes | deposited |
T3999 | 2279-2282 | VB | denotes | was |
T3998 | 2270-2278 | NN | denotes | sequence |
T3997 | 2265-2269 | DT | denotes | This |
T3996 | 2262-2263 | -RRB- | denotes | ) |
T3995 | 2250-2262 | NN | denotes | Perkin-Elmer |
T3994 | 2249-2250 | -LRB- | denotes | ( |
T3993 | 2239-2248 | NN | denotes | sequencer |
T3992 | 2234-2238 | NN | denotes | 373A |
T3991 | 2231-2233 | NN | denotes | PE |
T3990 | 2229-2230 | DT | denotes | a |
T3989 | 2225-2228 | CC | denotes | and |
T3988 | 2223-2224 | -RRB- | denotes | ) |
T3987 | 2211-2223 | NN | denotes | Perkin-Elmer |
T3986 | 2210-2211 | -LRB- | denotes | ( |
T3985 | 2206-2209 | NN | denotes | kit |
T3984 | 2197-2205 | NN | denotes | reaction |
T3983 | 2191-2196 | JJ | denotes | ready |
T3982 | 2180-2190 | NN | denotes | sequencing |
T3981 | 2174-2179 | NN | denotes | cycle |
T3980 | 2163-2173 | NN | denotes | terminator |
T3979 | 2159-2162 | NN | denotes | dye |
T3978 | 2153-2158 | NNP | denotes | PRISM |
T3977 | 2149-2152 | NNP | denotes | ABI |
T3976 | 2145-2148 | DT | denotes | the |
T3975 | 2139-2144 | VB | denotes | using |
T3974 | 2128-2138 | VB | denotes | determined |
T3973 | 2124-2127 | VB | denotes | was |
T3972 | 2117-2123 | NN | denotes | region |
T3971 | 2108-2116 | NN | denotes | flanking |
T3970 | 2105-2107 | NN | denotes | 5′ |
T3969 | 2100-2104 | NN | denotes | gene |
T3968 | 2091-2099 | NN | denotes | SerpinB2 |
T3967 | 2084-2090 | JJ | denotes | murine |
T3966 | 2081-2083 | NN | denotes | bp |
T3965 | 2076-2080 | CD | denotes | 4480 |
T3964 | 2072-2075 | DT | denotes | the |
T3963 | 2069-2071 | IN | denotes | of |
T3962 | 2060-2068 | NN | denotes | sequence |
T3961 | 2049-2059 | NN | denotes | nucleotide |
T3960 | 2045-2048 | DT | denotes | The |
T3959 | 2033-2043 | NN | denotes | sequencing |
T3958 | 2029-2032 | NN | denotes | DNA |
T3957 | 2025-2028 | CC | denotes | and |
T3956 | 2015-2024 | NN | denotes | digestion |
T3955 | 2008-2014 | NN | denotes | enzyme |
T3954 | 1996-2007 | NN | denotes | restriction |
T3953 | 1993-1995 | IN | denotes | by |
T3952 | 1984-1992 | VB | denotes | verified |
T3951 | 1979-1983 | VB | denotes | were |
T3950 | 1971-1978 | NN | denotes | inserts |
T3949 | 1961-1970 | VB | denotes | Subcloned |
T3948 | 1947-1959 | NN | denotes | orientations |
T3947 | 1938-1946 | JJ | denotes | opposite |
T3946 | 1935-1937 | IN | denotes | in |
T3945 | 1928-1934 | VB | denotes | cloned |
T3944 | 1926-1927 | -COMMA- | denotes | , |
T3943 | 1918-1926 | NN | denotes | fragment |
T3942 | 1912-1917 | NN | denotes | EcoRI |
T3941 | 1904-1911 | NN | denotes | pDB9406 |
T3940 | 1900-1903 | DT | denotes | the |
T3939 | 1897-1899 | IN | denotes | of |
T3938 | 1888-1896 | RB | denotes | upstream |
T3937 | 1876-1887 | RB | denotes | immediately |
T3936 | 1868-1875 | JJ | denotes | located |
T3935 | 1866-1867 | -COMMA- | denotes | , |
T3934 | 1858-1866 | NN | denotes | fragment |
T3933 | 1850-1857 | JJ | denotes | genomic |
T3932 | 1844-1849 | NN | denotes | EcoRI |
T3931 | 1841-1843 | NN | denotes | kb |
T3930 | 1837-1840 | CD | denotes | 1.2 |
T3929 | 1835-1836 | DT | denotes | a |
T3928 | 1827-1834 | VB | denotes | contain |
T3927 | 1816-1826 | NN | denotes | pDB9402-42 |
T3926 | 1812-1815 | CC | denotes | and |
T3925 | 1801-1811 | NN | denotes | pDB9402-41 |
T3924 | 1799-1800 | -COLON- | denotes | ; |
T3923 | 1795-1799 | NN | denotes | site |
T3922 | 1784-1794 | NN | denotes | initiation |
T3921 | 1770-1783 | NN | denotes | transcription |
T3920 | 1766-1769 | DT | denotes | the |
T3919 | 1757-1765 | VB | denotes | spanning |
T3918 | 1748-1756 | NN | denotes | fragment |
T3917 | 1740-1747 | JJ | denotes | genomic |
T3916 | 1729-1739 | NN | denotes | EcoRI/SpeI |
T3915 | 1726-1728 | NN | denotes | kb |
T3914 | 1722-1725 | CD | denotes | 4.4 |
T3913 | 1720-1721 | DT | denotes | a |
T3912 | 1711-1719 | VB | denotes | contains |
T3911 | 1703-1710 | NN | denotes | pDB9406 |
T3910 | 1695-1702 | NNP | denotes | Geneva. |
T3909 | 1692-1694 | IN | denotes | of |
T3908 | 1681-1691 | NNP | denotes | University |
T3907 | 1679-1680 | -COMMA- | denotes | , |
T3906 | 1674-1679 | NNP | denotes | Belin |
T3905 | 1664-1673 | NNP | denotes | Dominique |
T3904 | 1660-1663 | NNP | denotes | Dr. |
T3903 | 1657-1659 | IN | denotes | by |
T3902 | 1648-1656 | VB | denotes | provided |
T3901 | 1641-1647 | RB | denotes | kindly |
T3900 | 1636-1640 | VB | denotes | were |
T3899 | 1634-1635 | -COMMA- | denotes | , |
T3898 | 1628-1634 | NN | denotes | strain |
T3897 | 1622-1627 | NN | denotes | mouse |
T3896 | 1618-1621 | CD | denotes | 129 |
T3895 | 1616-1617 | DT | denotes | a |
T3894 | 1611-1615 | IN | denotes | from |
T3893 | 1602-1610 | VB | denotes | prepared |
T3892 | 1594-1601 | NN | denotes | library |
T3891 | 1586-1593 | JJ | denotes | genomic |
T3890 | 1584-1585 | -RRB- | denotes | ) |
T3889 | 1574-1584 | NN | denotes | Stratagene |
T3888 | 1573-1574 | -LRB- | denotes | ( |
T3887 | 1566-1572 | NN | denotes | λFIXII |
T3886 | 1564-1565 | DT | denotes | a |
T3885 | 1559-1563 | IN | denotes | from |
T3884 | 1550-1558 | VB | denotes | isolated |
T3883 | 1546-1549 | NN | denotes | DNA |
T3882 | 1538-1545 | JJ | denotes | genomic |
T3881 | 1527-1537 | VB | denotes | containing |
T3880 | 1516-1526 | NN | denotes | pDB9402-42 |
T3879 | 1512-1515 | CC | denotes | and |
T3878 | 1501-1511 | NN | denotes | pDB9402-41 |
T3877 | 1499-1500 | -COMMA- | denotes | , |
T3876 | 1492-1499 | NN | denotes | pDB9406 |
T3875 | 1483-1491 | NN | denotes | Plasmids |
T3874 | 1472-1481 | NN | denotes | digestion |
T4335 | 2530-2532 | IN | denotes | on |
T4334 | 2520-2529 | VB | denotes | separated |
T4333 | 2515-2519 | VB | denotes | were |
T4332 | 2506-2514 | NN | denotes | proteins |
T4331 | 2504-2505 | -COMMA- | denotes | , |
T4330 | 2503-2504 | -RRB- | denotes | ) |
T4329 | 2500-2503 | NN | denotes | SDS |
T4328 | 2498-2499 | NN | denotes | % |
T4327 | 2495-2498 | CD | denotes | 0.1 |
T4326 | 2493-2494 | -COMMA- | denotes | , |
T4325 | 2481-2493 | NN | denotes | deoxycholate |
T4324 | 2479-2480 | NN | denotes | % |
T4323 | 2476-2479 | CD | denotes | 0.5 |
T4322 | 2474-2475 | -COMMA- | denotes | , |
T4321 | 2469-2474 | NN | denotes | NP-40 |
T4320 | 2467-2468 | NN | denotes | % |
T4319 | 2464-2467 | CD | denotes | 0.5 |
T4318 | 2462-2463 | -COMMA- | denotes | , |
T4317 | 2457-2462 | NN | denotes | X-100 |
T4316 | 2450-2456 | NN | denotes | Triton |
T4315 | 2449-2450 | NN | denotes | % |
T4314 | 2448-2449 | CD | denotes | 1 |
T4313 | 2446-2447 | -COMMA- | denotes | , |
T4312 | 2442-2446 | NN | denotes | NaCl |
T4311 | 2439-2441 | NN | denotes | mM |
T3873 | 1468-1471 | CD | denotes | III |
T3872 | 1456-1467 | NN | denotes | exonuclease |
T3871 | 1453-1455 | IN | denotes | by |
T3870 | 1442-1452 | VB | denotes | introduced |
T3869 | 1432-1441 | NN | denotes | deletions |
T3868 | 1421-1431 | VB | denotes | containing |
T3867 | 1410-1420 | NN | denotes | pDB9402-42 |
T3866 | 1406-1409 | CC | denotes | and |
T3865 | 1395-1405 | NN | denotes | pDB9402-41 |
T3864 | 1390-1394 | IN | denotes | from |
T3863 | 1381-1389 | VB | denotes | prepared |
T3862 | 1372-1380 | NN | denotes | plasmids |
T3861 | 1369-1371 | TO | denotes | to |
T3860 | 1360-1368 | NN | denotes | addition |
T3859 | 1357-1359 | IN | denotes | in |
T3858 | 1355-1356 | -COMMA- | denotes | , |
T3857 | 1345-1355 | NN | denotes | pDB9402-42 |
T3856 | 1341-1344 | CC | denotes | and |
T3855 | 1330-1340 | NN | denotes | pDB9402-41 |
T3854 | 1328-1329 | -COMMA- | denotes | , |
T3853 | 1321-1328 | NN | denotes | pDB9406 |
T3852 | 1312-1320 | NN | denotes | plasmids |
T3851 | 1302-1311 | JJ | denotes | pUC-based |
T3850 | 1298-1301 | DT | denotes | the |
T3849 | 1287-1297 | VB | denotes | sequencing |
T3848 | 1284-1286 | IN | denotes | by |
T3673 | 1176-1177 | -RRB- | denotes | A |
T3672 | 1166-1176 | NNP | denotes | 7939_s1) ( |
T3671 | 1159-1166 | NNP | denotes | (Mm0060 |
T3670 | 1157-1158 | -LRB- | denotes | n |
T3669 | 1156-1157 | -RRB- | denotes | i |
T3668 | 1143-1156 | NN | denotes | s1) and β-act |
T3667 | 1142-1143 | -LRB- | denotes | _ |
T3666 | 1135-1142 | NN | denotes | 0843434 |
T3665 | 1132-1135 | CC | denotes | Mm0 |
T3664 | 1131-1132 | -RRB- | denotes | ( |
T3663 | 1117-1130 | NN | denotes | 05_m1), Cebpb |
T3662 | 1116-1117 | -LRB- | denotes | 9 |
T3661 | 1111-1116 | NN | denotes | 00440 |
T3660 | 1110-1111 | -COMMA- | denotes | m |
T3659 | 1109-1110 | -RRB- | denotes | M |
T3658 | 1096-1109 | NN | denotes | b2/SerpinB2 ( |
T3657 | 1095-1096 | -LRB- | denotes | n |
T3656 | 1078-1095 | NN | denotes | primers for Serpi |
T3655 | 1075-1078 | IN | denotes | 0X |
T3654 | 1068-1075 | NN | denotes | ssion 2 |
T3653 | 1065-1068 | NN | denotes | pre |
T3652 | 1055-1065 | NN | denotes | n® Gene Ex |
T3651 | 1051-1055 | NNP | denotes | aqMa |
T3650 | 1044-1051 | NNP | denotes | using T |
T3649 | 1039-1044 | VB | denotes | rmed |
T3648 | 1030-1039 | VB | denotes | was perfo |
T3647 | 1027-1030 | VB | denotes | CR |
T3646 | 1023-1027 | NN | denotes | . qP |
T3645 | 1022-1023 | -RRB- | denotes | ) |
T3644 | 1012-1022 | NNP | denotes | Biosystems |
T3643 | 1004-1011 | NNP | denotes | Applied |
T3642 | 1003-1004 | -LRB- | denotes | ( |
T3641 | 994-1002 | NN | denotes | Reagents |
T3640 | 980-993 | NN | denotes | Transcription |
T3639 | 972-979 | NNP | denotes | Reverse |
T3638 | 964-971 | NNP | denotes | TaqMan® |
T3637 | 958-963 | VB | denotes | using |
T3636 | 946-957 | VB | denotes | transcribed |
T3635 | 938-945 | RB | denotes | reverse |
T3634 | 934-937 | VB | denotes | was |
T3633 | 930-933 | NN | denotes | RNA |
T3632 | 924-929 | JJ | denotes | total |
T3631 | 921-923 | IN | denotes | of |
T3630 | 918-920 | NN | denotes | µg |
T3629 | 916-917 | CD | denotes | 1 |
T3628 | 914-915 | -COMMA- | denotes | , |
T3627 | 905-914 | NN | denotes | synthesis |
T3626 | 900-904 | NN | denotes | cDNA |
T3625 | 896-899 | IN | denotes | For |
T3624 | 889-894 | NN | denotes | cells |
T3623 | 884-888 | IN | denotes | from |
T3622 | 880-883 | NN | denotes | RNA |
T3621 | 874-879 | JJ | denotes | total |
T3620 | 866-873 | VB | denotes | isolate |
T3619 | 863-865 | TO | denotes | to |
T3618 | 858-862 | VB | denotes | used |
T3617 | 854-857 | VB | denotes | was |
T3616 | 852-853 | -RRB- | denotes | ) |
T3615 | 846-852 | NN | denotes | Qiagen |
T3614 | 845-846 | -LRB- | denotes | ( |
T3613 | 841-844 | NNP | denotes | Kit |
T3612 | 836-840 | NNP | denotes | Mini |
T3611 | 829-835 | NNP | denotes | RNeasy |
T3610 | 825-828 | DT | denotes | The |
T3609 | 823-824 | -RRB- | denotes | ) |
T3608 | 819-823 | NN | denotes | qPCR |
T3607 | 818-819 | -LRB- | denotes | ( |
T3606 | 814-817 | NN | denotes | PCR |
T3605 | 801-813 | JJ | denotes | Quantitative |
T3287 | 783-788 | NNP | denotes | Sigma |
T3286 | 778-782 | IN | denotes | from |
T3285 | 769-777 | VB | denotes | obtained |
T3284 | 765-768 | VB | denotes | was |
T3283 | 763-764 | -RRB- | denotes | ) |
T3282 | 758-763 | NN | denotes | Re595 |
T3281 | 751-757 | NN | denotes | Strain |
T3280 | 741-750 | NN | denotes | minnesota |
T3279 | 730-740 | NN | denotes | Salmonella |
T3278 | 729-730 | -LRB- | denotes | ( |
T3277 | 727-728 | -RRB- | denotes | ) |
T3276 | 724-727 | NN | denotes | LPS |
T3275 | 723-724 | -LRB- | denotes | ( |
T3274 | 704-722 | NN | denotes | lipopolysaccharide |
T3273 | 694-703 | JJ | denotes | Bacterial |
T3272 | 691-692 | -RRB- | denotes | ) |
T3271 | 686-691 | NN | denotes | Lonza |
T3270 | 685-686 | -LRB- | denotes | ( |
T3269 | 681-684 | NN | denotes | Kit |
T3268 | 671-680 | NNP | denotes | Detection |
T3267 | 661-670 | NNP | denotes | MycoAlert |
T3266 | 657-660 | DT | denotes | the |
T3265 | 653-656 | CC | denotes | and |
T3264 | 651-652 | -RRB- | denotes | ) |
T3263 | 646-651 | NN | denotes | Sigma |
T3262 | 645-646 | -LRB- | denotes | ( |
T3261 | 639-644 | CD | denotes | 33258 |
T3260 | 633-638 | NN | denotes | stain |
T3259 | 625-632 | NNP | denotes | Hoechst |
T3258 | 619-624 | VB | denotes | using |
T3257 | 610-618 | NN | denotes | staining |
T3256 | 602-609 | JJ | denotes | nuclear |
T3255 | 599-601 | IN | denotes | by |
T3254 | 589-598 | NN | denotes | infection |
T3253 | 578-588 | NN | denotes | Mycoplasma |
T3252 | 570-577 | VB | denotes | exclude |
T3251 | 567-569 | TO | denotes | to |
T3250 | 559-566 | VB | denotes | checked |
T3249 | 549-558 | RB | denotes | routinely |
T3248 | 544-548 | VB | denotes | were |
T3247 | 535-543 | NN | denotes | cultures |
T3246 | 531-534 | DT | denotes | All |
T3245 | 523-529 | NN | denotes | method |
T3244 | 513-522 | NN | denotes | exclusion |
T3243 | 509-512 | NN | denotes | dye |
T3242 | 507-508 | -RRB- | denotes | ) |
T3241 | 502-507 | NN | denotes | Sigma |
T3240 | 501-502 | -LRB- | denotes | ( |
T3239 | 496-500 | JJ | denotes | blue |
T3238 | 489-495 | NN | denotes | trypan |
T3237 | 485-488 | DT | denotes | the |
T3236 | 479-484 | VB | denotes | using |
T3235 | 468-478 | VB | denotes | determined |
T3234 | 464-467 | VB | denotes | was |
T3233 | 454-463 | NN | denotes | viability |
T3232 | 449-453 | NN | denotes | Cell |
T3231 | 442-447 | NN | denotes | serum |
T3230 | 433-441 | JJ | denotes | LPS-free |
T3229 | 423-432 | VB | denotes | certified |
T3228 | 420-422 | IN | denotes | of |
T3227 | 416-419 | NN | denotes | use |
T3226 | 412-415 | DT | denotes | the |
T3225 | 404-411 | IN | denotes | through |
T3224 | 395-403 | NN | denotes | cultures |
T3223 | 390-394 | NN | denotes | cell |
T3222 | 386-389 | DT | denotes | all |
T3221 | 381-385 | IN | denotes | from |
T3220 | 367-380 | NN | denotes | contamination |
T3219 | 348-366 | NN | denotes | lipopolysaccharide |
T3218 | 338-347 | JJ | denotes | bacterial |
T3217 | 330-337 | VB | denotes | exclude |
T3216 | 327-329 | TO | denotes | to |
T3215 | 321-326 | VB | denotes | taken |
T3214 | 316-320 | VB | denotes | were |
T3213 | 304-315 | NN | denotes | Precautions |
T3212 | 301-302 | -RRB- | denotes | ) |
T3211 | 298-301 | NNP | denotes | BRL |
T3210 | 292-297 | NNP | denotes | Gibco |
T3209 | 291-292 | -LRB- | denotes | ( |
T3208 | 285-290 | NN | denotes | media |
T3207 | 276-284 | NN | denotes | DMEM/F12 |
T3206 | 274-275 | NN | denotes | % |
T3205 | 272-274 | CD | denotes | 50 |
T3204 | 269-271 | IN | denotes | in |
T3203 | 258-268 | VB | denotes | maintained |
T3202 | 254-257 | CC | denotes | and |
T3201 | 252-253 | -COMMA- | denotes | , |
T3200 | 247-252 | RB | denotes | later |
T3199 | 242-246 | NN | denotes | days |
T3198 | 238-241 | CD | denotes | 3–5 |
T3197 | 231-237 | NN | denotes | lavage |
T3196 | 220-230 | JJ | denotes | peritoneal |
T3195 | 217-219 | IN | denotes | by |
T3194 | 208-216 | VB | denotes | followed |
T3193 | 202-207 | NN | denotes | broth |
T3192 | 187-201 | NN | denotes | thioglycollate |
T3191 | 185-186 | NN | denotes | % |
T3190 | 184-185 | CD | denotes | 3 |
T3189 | 179-183 | IN | denotes | with |
T3188 | 174-178 | NN | denotes | mice |
T3187 | 166-173 | NN | denotes | C57BL/6 |
T3186 | 156-165 | VB | denotes | injecting |
T3185 | 153-155 | IN | denotes | by |
T3184 | 144-152 | VB | denotes | obtained |
T3183 | 139-143 | VB | denotes | were |
T3182 | 127-138 | NN | denotes | macrophages |
T3181 | 116-126 | JJ | denotes | peritoneal |
T3180 | 108-115 | JJ | denotes | Primary |
T3847 | 1273-1283 | VB | denotes | determined |
T3846 | 1269-1272 | VB | denotes | was |
T3845 | 1260-1268 | NN | denotes | promoter |
T3844 | 1251-1259 | NN | denotes | SerpinB2 |
T3843 | 1244-1250 | JJ | denotes | murine |
T3842 | 1240-1243 | DT | denotes | the |
T3841 | 1237-1239 | IN | denotes | of |
T3840 | 1228-1236 | NN | denotes | sequence |
T3839 | 1224-1227 | NN | denotes | DNA |
T3838 | 1220-1223 | DT | denotes | The |
T3837 | 1211-1219 | NN | denotes | Analysis |
T3836 | 1202-1210 | NN | denotes | Sequence |
T3835 | 1198-1201 | NN | denotes | DNA |
T3604 | 791-800 | JJ | denotes | Real-time |
R2266 | T3182 | T3180 | arg1Of | macrophages,Primary |
R2267 | T3182 | T3181 | arg1Of | macrophages,peritoneal |
R2268 | T3182 | T3183 | arg1Of | macrophages,were |
R2269 | T3182 | T3184 | arg2Of | macrophages,obtained |
R2270 | T3182 | T3203 | arg1Of | macrophages,maintained |
R2271 | T3184 | T3183 | arg2Of | obtained,were |
R2272 | T3184 | T3185 | arg1Of | obtained,by |
R2273 | T3184 | T3202 | arg1Of | obtained,and |
R2274 | T3186 | T3185 | arg2Of | injecting,by |
R2275 | T3188 | T3186 | arg2Of | mice,injecting |
R2276 | T3188 | T3187 | arg1Of | mice,C57BL/6 |
R2277 | T3188 | T3189 | arg1Of | mice,with |
R2278 | T3190 | T3191 | arg1Of | 3,% |
R2279 | T3193 | T3189 | arg2Of | broth,with |
R2280 | T3193 | T3190 | arg1Of | broth,3 |
R2281 | T3193 | T3192 | arg1Of | broth,thioglycollate |
R2282 | T3193 | T3194 | arg2Of | broth,followed |
R2283 | T3194 | T3200 | arg1Of | followed,later |
R2284 | T3197 | T3194 | arg1Of | lavage,followed |
R2285 | T3197 | T3195 | arg2Of | lavage,by |
R2286 | T3197 | T3196 | arg1Of | lavage,peritoneal |
R2287 | T3199 | T3198 | arg1Of | days,3–5 |
R2288 | T3200 | T3199 | arg1Of | later,days |
R2289 | T3202 | T3201 | arg1Of | and,"," |
R2290 | T3203 | T3202 | arg2Of | maintained,and |
R2291 | T3203 | T3204 | arg1Of | maintained,in |
R2292 | T3205 | T3206 | arg1Of | 50,% |
R2293 | T3208 | T3204 | arg2Of | media,in |
R2294 | T3208 | T3205 | arg1Of | media,50 |
R2295 | T3208 | T3207 | arg1Of | media,DMEM/F12 |
R2296 | T3208 | T3209 | arg1Of | media,( |
R2297 | T3211 | T3209 | arg2Of | BRL,( |
R2298 | T3211 | T3210 | arg1Of | BRL,Gibco |
R2299 | T3212 | T3209 | arg3Of | ),( |
R2300 | T3213 | T3214 | arg1Of | Precautions,were |
R2301 | T3213 | T3215 | arg2Of | Precautions,taken |
R2302 | T3213 | T3217 | arg1Of | Precautions,exclude |
R2303 | T3215 | T3214 | arg2Of | taken,were |
R2304 | T3217 | T3215 | arg3Of | exclude,taken |
R2305 | T3217 | T3216 | arg1Of | exclude,to |
R2306 | T3217 | T3225 | arg1Of | exclude,through |
R2307 | T3220 | T3217 | arg2Of | contamination,exclude |
R2308 | T3220 | T3218 | arg1Of | contamination,bacterial |
R2309 | T3220 | T3219 | arg1Of | contamination,lipopolysaccharide |
R2310 | T3220 | T3221 | arg1Of | contamination,from |
R2311 | T3224 | T3221 | arg2Of | cultures,from |
R2312 | T3224 | T3222 | arg1Of | cultures,all |
R2313 | T3224 | T3223 | arg1Of | cultures,cell |
R2314 | T3227 | T3225 | arg2Of | use,through |
R2315 | T3227 | T3226 | arg1Of | use,the |
R2316 | T3227 | T3228 | arg1Of | use,of |
R2317 | T3231 | T3228 | arg2Of | serum,of |
R2318 | T3231 | T3229 | arg2Of | serum,certified |
R2319 | T3231 | T3230 | arg1Of | serum,LPS-free |
R2320 | T3233 | T3232 | arg1Of | viability,Cell |
R2321 | T3233 | T3234 | arg1Of | viability,was |
R2322 | T3233 | T3235 | arg2Of | viability,determined |
R2323 | T3235 | T3234 | arg2Of | determined,was |
R2324 | T3236 | T3235 | arg3Of | using,determined |
R2325 | T3241 | T3240 | arg2Of | Sigma,( |
R2326 | T3242 | T3240 | arg3Of | ),( |
R2327 | T3245 | T3236 | arg2Of | method,using |
R2328 | T3245 | T3237 | arg1Of | method,the |
R2329 | T3245 | T3238 | arg1Of | method,trypan |
R2330 | T3245 | T3239 | arg1Of | method,blue |
R2331 | T3245 | T3240 | arg1Of | method,( |
R2332 | T3245 | T3243 | arg1Of | method,dye |
R2333 | T3245 | T3244 | arg1Of | method,exclusion |
R2334 | T3247 | T3246 | arg1Of | cultures,All |
R2335 | T3247 | T3248 | arg1Of | cultures,were |
R2336 | T3247 | T3250 | arg2Of | cultures,checked |
R2337 | T3250 | T3248 | arg2Of | checked,were |
R2338 | T3250 | T3249 | arg1Of | checked,routinely |
R2339 | T3250 | T3251 | modOf | checked,to |
R2340 | T3252 | T3251 | arg1Of | exclude,to |
R2341 | T3254 | T3252 | arg2Of | infection,exclude |
R2342 | T3254 | T3253 | arg1Of | infection,Mycoplasma |
R2343 | T3254 | T3255 | arg1Of | infection,by |
R2344 | T3257 | T3256 | arg1Of | staining,nuclear |
R2345 | T3257 | T3258 | arg1Of | staining,using |
R2346 | T3257 | T3265 | arg1Of | staining,and |
R2347 | T3260 | T3258 | arg2Of | stain,using |
R2348 | T3260 | T3259 | arg1Of | stain,Hoechst |
R2349 | T3260 | T3261 | arg1Of | stain,33258 |
R2350 | T3260 | T3262 | arg1Of | stain,( |
R2351 | T3263 | T3262 | arg2Of | Sigma,( |
R2352 | T3264 | T3262 | arg3Of | ),( |
R2353 | T3265 | T3255 | arg2Of | and,by |
R2354 | T3268 | T3267 | arg1Of | Detection,MycoAlert |
R2355 | T3269 | T3265 | arg2Of | Kit,and |
R2356 | T3269 | T3266 | arg1Of | Kit,the |
R2357 | T3269 | T3268 | arg1Of | Kit,Detection |
R2358 | T3269 | T3270 | arg1Of | Kit,( |
R2359 | T3271 | T3270 | arg2Of | Lonza,( |
R2360 | T3272 | T3270 | arg3Of | ),( |
R2361 | T3274 | T3273 | arg1Of | lipopolysaccharide,Bacterial |
R2362 | T3274 | T3275 | arg1Of | lipopolysaccharide,( |
R2363 | T3274 | T3278 | arg1Of | lipopolysaccharide,( |
R2364 | T3274 | T3284 | arg1Of | lipopolysaccharide,was |
R2365 | T3274 | T3285 | arg2Of | lipopolysaccharide,obtained |
R2366 | T3276 | T3275 | arg2Of | LPS,( |
R2367 | T3277 | T3275 | arg3Of | ),( |
R2368 | T3282 | T3278 | arg2Of | Re595,( |
R2369 | T3282 | T3279 | arg1Of | Re595,Salmonella |
R2370 | T3282 | T3280 | arg1Of | Re595,minnesota |
R2371 | T3282 | T3281 | arg1Of | Re595,Strain |
R2372 | T3283 | T3278 | arg3Of | ),( |
R2373 | T3285 | T3284 | arg2Of | obtained,was |
R2374 | T3285 | T3286 | arg1Of | obtained,from |
R2375 | T3287 | T3286 | arg2Of | Sigma,from |
R2630 | T3613 | T3614 | arg1Of | Kit,( |
R2632 | T3613 | T3618 | arg2Of | Kit,used |
R2633 | T3613 | T3620 | arg1Of | Kit,isolate |
R2634 | T3615 | T3614 | arg2Of | Qiagen,( |
R2637 | T3620 | T3618 | arg3Of | isolate,used |
R2638 | T3620 | T3619 | arg1Of | isolate,to |
R2639 | T3620 | T3623 | arg1Of | isolate,from |
R2640 | T3622 | T3620 | arg2Of | RNA,isolate |
R2641 | T3622 | T3621 | arg1Of | RNA,total |
R2642 | T3624 | T3623 | arg2Of | cells,from |
R2643 | T3627 | T3625 | arg2Of | synthesis,For |
R2644 | T3627 | T3626 | arg1Of | synthesis,cDNA |
R2645 | T3630 | T3629 | arg1Of | µg,1 |
R2646 | T3630 | T3631 | arg1Of | µg,of |
R2647 | T3630 | T3634 | arg1Of | µg,was |
R2648 | T3630 | T3636 | arg2Of | µg,transcribed |
R2649 | T3630 | T3637 | arg1Of | µg,using |
R2650 | T3633 | T3631 | arg2Of | RNA,of |
R2651 | T3633 | T3632 | arg1Of | RNA,total |
R2652 | T3636 | T3625 | arg1Of | transcribed,For |
R2653 | T3636 | T3628 | arg1Of | transcribed,"," |
R2654 | T3636 | T3634 | arg2Of | transcribed,was |
R2655 | T3636 | T3635 | arg1Of | transcribed,reverse |
R2656 | T3636 | T3637 | modOf | transcribed,using |
R2657 | T3639 | T3638 | arg1Of | Reverse,TaqMan® |
R2658 | T3641 | T3637 | arg2Of | Reagents,using |
R2659 | T3641 | T3639 | arg1Of | Reagents,Reverse |
R2660 | T3641 | T3640 | arg1Of | Reagents,Transcription |
R2661 | T3641 | T3642 | arg1Of | Reagents,( |
R2662 | T3641 | T3647 | modOf | Reagents,CR |
R2663 | T3644 | T3642 | arg2Of | Biosystems,( |
R2664 | T3644 | T3643 | arg1Of | Biosystems,Applied |
R2665 | T3645 | T3642 | arg3Of | ),( |
R2666 | T3646 | T3647 | arg1Of | . qP,CR |
R2667 | T3646 | T3648 | arg2Of | . qP,was perfo |
R2668 | T3648 | T3647 | arg2Of | was perfo,CR |
R2669 | T3649 | T3648 | arg3Of | rmed ,was perfo |
R2670 | T3651 | T3650 | arg1Of | aqMa,using T |
R2671 | T3654 | T3649 | arg2Of | ssion 2,rmed |
R2672 | T3654 | T3651 | arg1Of | ssion 2,aqMa |
R2673 | T3654 | T3652 | arg1Of | ssion 2,n® Gene Ex |
R2674 | T3654 | T3653 | arg1Of | ssion 2,pre |
R2675 | T3654 | T3655 | arg1Of | ssion 2,0X |
R2676 | T3654 | T3670 | arg1Of | ssion 2,n |
R2677 | T3656 | T3657 | arg1Of | primers for Serpi,n |
R2678 | T3656 | T3660 | arg1Of | primers for Serpi,m |
R2679 | T3658 | T3657 | arg2Of | b2/SerpinB2 (,n |
R2680 | T3659 | T3657 | arg3Of | M,n |
R2681 | T3660 | T3665 | arg1Of | m,Mm0 |
R2682 | T3661 | T3660 | arg2Of | 00440,m |
R2683 | T3661 | T3662 | arg1Of | 00440,9 |
R2684 | T3663 | T3662 | arg2Of | "05_m1), Cebpb",9 |
R2685 | T3664 | T3662 | arg3Of | (,9 |
R2686 | T3665 | T3655 | arg2Of | Mm0,0X |
R2687 | T3666 | T3665 | arg2Of | 0843434,Mm0 |
R2688 | T3666 | T3667 | arg1Of | 0843434,_ |
R2689 | T3668 | T3667 | arg2Of | s1) and β-act,_ |
R2690 | T3669 | T3667 | arg3Of | i,_ |
R2691 | T3672 | T3670 | arg2Of | 7939_s1) (,n |
R2692 | T3672 | T3671 | arg1Of | 7939_s1) (,(Mm0060 |
R2693 | T3673 | T3670 | arg3Of | A,n |
R2778 | T3837 | T3835 | arg1Of | Analysis,DNA |
R2779 | T3837 | T3836 | arg1Of | Analysis,Sequence |
R2780 | T3840 | T3838 | arg1Of | sequence,The |
R2781 | T3840 | T3839 | arg1Of | sequence,DNA |
R2782 | T3840 | T3841 | arg1Of | sequence,of |
R2783 | T3840 | T3846 | arg1Of | sequence,was |
R2784 | T3840 | T3847 | arg2Of | sequence,determined |
R2785 | T3845 | T3841 | arg2Of | promoter,of |
R2786 | T3845 | T3842 | arg1Of | promoter,the |
R2787 | T3845 | T3843 | arg1Of | promoter,murine |
R2788 | T3845 | T3844 | arg1Of | promoter,SerpinB2 |
R2789 | T3847 | T3846 | arg2Of | determined,was |
R2790 | T3847 | T3848 | arg1Of | determined,by |
R2791 | T3849 | T3848 | arg2Of | sequencing,by |
R2792 | T3849 | T3858 | arg1Of | sequencing,"," |
R2793 | T3849 | T3859 | arg1Of | sequencing,in |
R2794 | T3853 | T3854 | arg1Of | pDB9406,"," |
R2795 | T3854 | T3856 | arg1Of | ",",and |
R2796 | T3855 | T3854 | arg2Of | pDB9402-41,"," |
R2797 | T3856 | T3849 | arg2Of | and,sequencing |
R2798 | T3856 | T3850 | arg1Of | and,the |
R2799 | T3856 | T3851 | arg1Of | and,pUC-based |
R2800 | T3856 | T3852 | arg1Of | and,plasmids |
R2801 | T3857 | T3856 | arg2Of | pDB9402-42,and |
R2803 | T3860 | T3861 | arg1Of | addition,to |
R2804 | T3862 | T3861 | arg2Of | plasmids,to |
R2805 | T3862 | T3863 | arg2Of | plasmids,prepared |
R2806 | T3863 | T3864 | arg1Of | prepared,from |
R2807 | T3865 | T3866 | arg1Of | pDB9402-41,and |
R2808 | T3866 | T3864 | arg2Of | and,from |
R2809 | T3866 | T3868 | arg1Of | and,containing |
R2810 | T3867 | T3866 | arg2Of | pDB9402-42,and |
R2811 | T3869 | T3868 | arg2Of | deletions,containing |
R2812 | T3869 | T3870 | arg2Of | deletions,introduced |
R2813 | T3874 | T3870 | arg1Of | digestion,introduced |
R2814 | T3874 | T3871 | arg2Of | digestion,by |
R2815 | T3874 | T3872 | arg1Of | digestion,exonuclease |
R2816 | T3874 | T3873 | arg1Of | digestion,III |
R2817 | T3876 | T3877 | arg1Of | pDB9406,"," |
R2818 | T3877 | T3879 | arg1Of | ",",and |
R2819 | T3878 | T3877 | arg2Of | pDB9402-41,"," |
R2820 | T3879 | T3875 | arg1Of | and,Plasmids |
R2821 | T3879 | T3881 | arg1Of | and,containing |
R2822 | T3879 | T3900 | arg1Of | and,were |
R2823 | T3879 | T3902 | arg2Of | and,provided |
R2824 | T3880 | T3879 | arg2Of | pDB9402-42,and |
R2825 | T3883 | T3881 | arg2Of | DNA,containing |
R2826 | T3883 | T3882 | arg1Of | DNA,genomic |
R2827 | T3883 | T3884 | arg2Of | DNA,isolated |
R2828 | T3884 | T3885 | arg1Of | isolated,from |
R2829 | T3889 | T3888 | arg2Of | Stratagene,( |
R2830 | T3890 | T3888 | arg3Of | ),( |
R2831 | T3892 | T3885 | arg2Of | library,from |
R2832 | T3892 | T3886 | arg1Of | library,a |
R2833 | T3892 | T3887 | arg1Of | library,λFIXII |
R2834 | T3892 | T3888 | arg1Of | library,( |
R2835 | T3892 | T3891 | arg1Of | library,genomic |
R2836 | T3892 | T3893 | arg2Of | library,prepared |
R2837 | T3893 | T3894 | arg1Of | prepared,from |
R2838 | T3898 | T3894 | arg2Of | strain,from |
R2839 | T3898 | T3895 | arg1Of | strain,a |
R2840 | T3898 | T3896 | arg1Of | strain,129 |
R2841 | T3898 | T3897 | arg1Of | strain,mouse |
R2842 | T3902 | T3899 | arg1Of | provided,"," |
R2843 | T3902 | T3900 | arg2Of | provided,were |
R2844 | T3902 | T3901 | arg1Of | provided,kindly |
R2845 | T3902 | T3907 | arg1Of | provided,"," |
R2846 | T3906 | T3902 | arg1Of | Belin,provided |
R2847 | T3906 | T3903 | arg2Of | Belin,by |
R2848 | T3906 | T3904 | arg1Of | Belin,Dr. |
R2849 | T3906 | T3905 | arg1Of | Belin,Dominique |
R2850 | T3908 | T3909 | arg1Of | University,of |
R2851 | T3910 | T3909 | arg2Of | Geneva.,of |
R2852 | T3911 | T3908 | arg1Of | pDB9406,University |
R2853 | T3911 | T3912 | arg1Of | pDB9406,contains |
R2854 | T3912 | T3907 | arg2Of | contains,"," |
R2855 | T3912 | T3924 | arg1Of | contains,; |
R2856 | T3918 | T3912 | arg2Of | fragment,contains |
R2857 | T3918 | T3913 | arg1Of | fragment,a |
R2858 | T3918 | T3914 | arg1Of | fragment,4.4 |
R2859 | T3918 | T3915 | arg1Of | fragment,kb |
R2860 | T3918 | T3916 | arg1Of | fragment,EcoRI/SpeI |
R2861 | T3918 | T3917 | arg1Of | fragment,genomic |
R2862 | T3918 | T3919 | arg1Of | fragment,spanning |
R2863 | T3923 | T3919 | arg2Of | site,spanning |
R2864 | T3923 | T3920 | arg1Of | site,the |
R2865 | T3923 | T3921 | arg1Of | site,transcription |
R2866 | T3923 | T3922 | arg1Of | site,initiation |
R2867 | T3925 | T3926 | arg1Of | pDB9402-41,and |
R2868 | T3926 | T3928 | arg1Of | and,contain |
R2869 | T3927 | T3926 | arg2Of | pDB9402-42,and |
R2870 | T3928 | T3924 | arg2Of | contain,; |
R2871 | T3934 | T3928 | arg2Of | fragment,contain |
R2872 | T3934 | T3929 | arg1Of | fragment,a |
R2873 | T3934 | T3930 | arg1Of | fragment,1.2 |
R2874 | T3934 | T3931 | arg1Of | fragment,kb |
R2875 | T3934 | T3932 | arg1Of | fragment,EcoRI |
R2876 | T3934 | T3933 | arg1Of | fragment,genomic |
R2877 | T3934 | T3935 | arg1Of | fragment,"," |
R2878 | T3934 | T3936 | arg1Of | fragment,located |
R2879 | T3934 | T3944 | arg1Of | fragment,"," |
R2880 | T3934 | T3945 | arg2Of | fragment,cloned |
R2881 | T3936 | T3938 | arg1Of | located,upstream |
R2882 | T3938 | T3937 | arg1Of | upstream,immediately |
R2883 | T3938 | T3939 | arg1Of | upstream,of |
R2884 | T3943 | T3939 | arg2Of | fragment,of |
R2885 | T3943 | T3940 | arg1Of | fragment,the |
R2886 | T3943 | T3941 | arg1Of | fragment,pDB9406 |
R2887 | T3943 | T3942 | arg1Of | fragment,EcoRI |
R2888 | T3945 | T3946 | arg1Of | cloned,in |
R2889 | T3948 | T3946 | arg2Of | orientations,in |
R2890 | T3948 | T3947 | arg1Of | orientations,opposite |
R2891 | T3950 | T3949 | arg2Of | inserts,Subcloned |
R2892 | T3950 | T3951 | arg1Of | inserts,were |
R2893 | T3950 | T3952 | arg2Of | inserts,verified |
R2894 | T3952 | T3951 | arg2Of | verified,were |
R2895 | T3956 | T3954 | arg1Of | digestion,restriction |
R2896 | T3956 | T3955 | arg1Of | digestion,enzyme |
R2897 | T3956 | T3957 | arg1Of | digestion,and |
R2898 | T3957 | T3952 | arg1Of | and,verified |
R2899 | T3957 | T3953 | arg2Of | and,by |
R2900 | T3959 | T3957 | arg2Of | sequencing,and |
R2901 | T3959 | T3958 | arg1Of | sequencing,DNA |
R2902 | T3962 | T3960 | arg1Of | sequence,The |
R2903 | T3962 | T3961 | arg1Of | sequence,nucleotide |
R2904 | T3962 | T3963 | arg1Of | sequence,of |
R2905 | T3962 | T3973 | arg1Of | sequence,was |
R2906 | T3962 | T3974 | arg2Of | sequence,determined |
R2907 | T3972 | T3963 | arg2Of | region,of |
R2908 | T3972 | T3964 | arg1Of | region,the |
R2909 | T3972 | T3965 | arg1Of | region,4480 |
R2910 | T3972 | T3966 | arg1Of | region,bp |
R2911 | T3972 | T3967 | arg1Of | region,murine |
R2912 | T3972 | T3968 | arg1Of | region,SerpinB2 |
R2913 | T3972 | T3969 | arg1Of | region,gene |
R2914 | T3972 | T3970 | arg1Of | region,5′ |
R2915 | T3972 | T3971 | arg1Of | region,flanking |
R2916 | T3974 | T3973 | arg2Of | determined,was |
R2917 | T3975 | T3974 | arg3Of | using,determined |
R2918 | T3978 | T3977 | arg1Of | PRISM,ABI |
R2919 | T3985 | T3976 | arg1Of | kit,the |
R2920 | T3985 | T3978 | arg1Of | kit,PRISM |
R2921 | T3985 | T3979 | arg1Of | kit,dye |
R2922 | T3985 | T3980 | arg1Of | kit,terminator |
R2923 | T3985 | T3981 | arg1Of | kit,cycle |
R2924 | T3985 | T3982 | arg1Of | kit,sequencing |
R2925 | T3985 | T3983 | arg1Of | kit,ready |
R2926 | T3985 | T3984 | arg1Of | kit,reaction |
R2927 | T3985 | T3986 | arg1Of | kit,( |
R2928 | T3985 | T3989 | arg1Of | kit,and |
R2929 | T3987 | T3986 | arg2Of | Perkin-Elmer,( |
R2930 | T3988 | T3986 | arg3Of | ),( |
R2931 | T3989 | T3975 | arg2Of | and,using |
R2932 | T3993 | T3989 | arg2Of | sequencer,and |
R2933 | T3993 | T3990 | arg1Of | sequencer,a |
R2934 | T3993 | T3991 | arg1Of | sequencer,PE |
R2935 | T3993 | T3992 | arg1Of | sequencer,373A |
R2936 | T3993 | T3994 | arg1Of | sequencer,( |
R2937 | T3995 | T3994 | arg2Of | Perkin-Elmer,( |
R2938 | T3996 | T3994 | arg3Of | ),( |
R2939 | T3998 | T3997 | arg1Of | sequence,This |
R2940 | T3998 | T3999 | arg1Of | sequence,was |
R2941 | T3998 | T4000 | arg2Of | sequence,deposited |
R2942 | T4000 | T3999 | arg2Of | deposited,was |
R2943 | T4000 | T4001 | arg1Of | deposited,in |
R2944 | T4007 | T4002 | arg1Of | No.,GenBank/EMBL/DDBJ |
R2945 | T4007 | T4003 | arg1Of | No.,Data |
R2946 | T4007 | T4004 | arg1Of | No.,Bank |
R2947 | T4007 | T4005 | arg1Of | No.,with |
R2948 | T4007 | T4006 | arg1Of | No.,Accession |
R2949 | T4008 | T4001 | arg2Of | AF339731,in |
R2950 | T4008 | T4007 | arg1Of | AF339731,No. |
R3138 | T4295 | T4294 | arg1Of | Blot,Western |
R3139 | T4296 | T4295 | arg1Of | Assays,Blot |
R3140 | T4299 | T4297 | arg1Of | lysates,Whole |
R3141 | T4299 | T4298 | arg1Of | lysates,cell |
R3142 | T4299 | T4300 | arg1Of | lysates,were |
R3143 | T4299 | T4301 | arg2Of | lysates,prepared |
R3144 | T4301 | T4300 | arg2Of | prepared,were |
R3145 | T4301 | T4302 | arg1Of | prepared,in |
R3146 | T4301 | T4305 | arg1Of | prepared,( |
R3147 | T4304 | T4302 | arg2Of | buffer,in |
R3148 | T4304 | T4303 | arg1Of | buffer,RIPA |
R3149 | T4308 | T4305 | arg2Of | Tris,( |
R3150 | T4308 | T4306 | arg1Of | Tris,10 |
R3151 | T4308 | T4307 | arg1Of | Tris,mM |
R3152 | T4308 | T4309 | arg1Of | Tris,"," |
R3153 | T4308 | T4326 | arg1Of | Tris,"," |
R3154 | T4310 | T4311 | arg1Of | 150,mM |
R3155 | T4312 | T4310 | arg1Of | NaCl,150 |
R3156 | T4312 | T4313 | arg1Of | NaCl,"," |
R3157 | T4313 | T4318 | arg1Of | ",","," |
R3158 | T4314 | T4315 | arg1Of | 1,% |
R3159 | T4317 | T4313 | arg2Of | X-100,"," |
R3160 | T4317 | T4314 | arg1Of | X-100,1 |
R3161 | T4317 | T4316 | arg1Of | X-100,Triton |
R3162 | T4318 | T4322 | arg1Of | ",","," |
R3163 | T4319 | T4320 | arg1Of | 0.5,% |
R3164 | T4321 | T4318 | arg2Of | NP-40,"," |
R3165 | T4321 | T4319 | arg1Of | NP-40,0.5 |
R3166 | T4322 | T4309 | arg2Of | ",","," |
R3167 | T4323 | T4324 | arg1Of | 0.5,% |
R3168 | T4325 | T4322 | arg2Of | deoxycholate,"," |
R3169 | T4325 | T4323 | arg1Of | deoxycholate,0.5 |
R3170 | T4327 | T4328 | arg1Of | 0.1,% |
R3171 | T4329 | T4326 | arg2Of | SDS,"," |
R3172 | T4329 | T4327 | arg1Of | SDS,0.1 |
R3173 | T4330 | T4305 | arg3Of | ),( |
R3174 | T4332 | T4333 | arg1Of | proteins,were |
R3175 | T4332 | T4334 | arg2Of | proteins,separated |
R3177 | T4334 | T4335 | arg1Of | separated,on |
R3179 | T4336 | T4337 | arg1Of | 4–12,% |
R3180 | T4340 | T4335 | arg2Of | gels,on |
R3181 | T4340 | T4336 | arg1Of | gels,4–12 |
R3182 | T4340 | T4338 | arg1Of | gels,Bis-Tris |
R3183 | T4340 | T4339 | arg1Of | gels,NuPAGE |
R3184 | T4340 | T4341 | arg1Of | gels,( |
R3185 | T4342 | T4341 | arg2Of | Invitrogen,( |
R3186 | T4343 | T4341 | arg3Of | ),( |
R2622 | T3606 | T3604 | arg1Of | PCR,Real-time |
R2623 | T3606 | T3605 | arg1Of | PCR,Quantitative |
R2624 | T3606 | T3607 | arg1Of | PCR,( |
R2625 | T3608 | T3607 | arg2Of | qPCR,( |
R2626 | T3609 | T3607 | arg3Of | ),( |
R2627 | T3613 | T3610 | arg1Of | Kit,The |
R2628 | T3613 | T3611 | arg1Of | Kit,RNeasy |
R2629 | T3613 | T3612 | arg1Of | Kit,Mini |
R2631 | T3613 | T3617 | arg1Of | Kit,was |
R2635 | T3616 | T3614 | arg3Of | ),( |
R2636 | T3618 | T3617 | arg2Of | used,was |
R2802 | T3860 | T3859 | arg2Of | addition,in |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3590 | 1151-1158 | Protein | denotes | β-actin |
T3589 | 1125-1130 | Protein | denotes | Cebpb |
T3588 | 1099-1107 | Protein | denotes | SerpinB2 |
T3587 | 1090-1098 | Protein | denotes | Serpinb2 |
T3825 | 2091-2099 | Protein | denotes | SerpinB2 |
T3824 | 1456-1471 | Protein | denotes | exonuclease III |
T3823 | 1251-1259 | Protein | denotes | SerpinB2 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4013 | 2091-2099 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T4012 | 1251-1259 | http://www.uniprot.org/uniprot/P05120 | denotes | SerpinB2 |
T3680 | 1151-1158 | http://www.uniprot.org/uniprot/P60709 | denotes | β-actin |
T3679 | 1125-1130 | http://www.uniprot.org/uniprot/P28033 | denotes | Cebpb |
UBERON-AE
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3158 | 442-447 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
T3157 | 41-46 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3828 | 1770-1783 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
T3827 | 2015-2024 | http://purl.obolibrary.org/obo/GO_0007586 | denotes | digestion |
T3826 | 1472-1481 | http://purl.obolibrary.org/obo/GO_0007586 | denotes | digestion |
T3594 | 1058-1073 | http://purl.obolibrary.org/obo/GO_0010467 | denotes | Gene Expression |
T3593 | 980-993 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | Transcription |
T3592 | 972-993 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | Reverse Transcription |
T3591 | 905-914 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4277 | 2380-2384 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T3595 | 889-894 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T3173 | 449-453 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cell |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4260 | 2354-2373 | Sentence | denotes | Western Blot Assays |
T3816 | 2265-2352 | Sentence | denotes | This sequence was deposited in GenBank/EMBL/DDBJ Data Bank with Accession No. AF339731. |
T3815 | 2045-2264 | Sentence | denotes | The nucleotide sequence of the 4480 bp murine SerpinB2 gene 5′ flanking region was determined using the ABI PRISM dye terminator cycle sequencing ready reaction kit (Perkin-Elmer) and a PE 373A sequencer (Perkin-Elmer). |
T3814 | 1961-2044 | Sentence | denotes | Subcloned inserts were verified by restriction enzyme digestion and DNA sequencing. |
T3813 | 1483-1960 | Sentence | denotes | Plasmids pDB9406, pDB9402-41 and pDB9402-42 containing genomic DNA isolated from a λFIXII (Stratagene) genomic library prepared from a 129 mouse strain, were kindly provided by Dr. Dominique Belin, University of Geneva. pDB9406 contains a 4.4 kb EcoRI/SpeI genomic fragment spanning the transcription initiation site; pDB9402-41 and pDB9402-42 contain a 1.2 kb EcoRI genomic fragment, located immediately upstream of the pDB9406 EcoRI fragment, cloned in opposite orientations. |
T3812 | 1220-1482 | Sentence | denotes | The DNA sequence of the murine SerpinB2 promoter was determined by sequencing the pUC-based plasmids pDB9406, pDB9402-41 and pDB9402-42, in addition to plasmids prepared from pDB9402-41 and pDB9402-42 containing deletions introduced by exonuclease III digestion. |
T3811 | 1198-1219 | Sentence | denotes | DNA Sequence Analysis |
T3582 | 896-1196 | Sentence | denotes | For cDNA synthesis, 1 µg of total RNA was reverse transcribed using TaqMan® Reverse Transcription Reagents (Applied Biosystems). qPCR was performed using TaqMan® Gene Expression 20X primers for Serpinb2/SerpinB2 (Mm00440905_m1), Cebpb (Mm00843434_s1) and β-actin (Mm00607939_s1) (Applied Biosystems). |
T3581 | 825-895 | Sentence | denotes | The RNeasy Mini Kit (Qiagen) was used to isolate total RNA from cells. |
T3580 | 791-824 | Sentence | denotes | Real-time Quantitative PCR (qPCR) |
T3165 | 694-789 | Sentence | denotes | Bacterial lipopolysaccharide (LPS) (Salmonella minnesota Strain Re595) was obtained from Sigma. |
T3164 | 531-693 | Sentence | denotes | All cultures were routinely checked to exclude Mycoplasma infection by nuclear staining using Hoechst stain 33258 (Sigma) and the MycoAlert Detection Kit (Lonza). |
T3163 | 449-530 | Sentence | denotes | Cell viability was determined using the trypan blue (Sigma) dye exclusion method. |
T3162 | 304-448 | Sentence | denotes | Precautions were taken to exclude bacterial lipopolysaccharide contamination from all cell cultures through the use of certified LPS-free serum. |
T3161 | 108-303 | Sentence | denotes | Primary peritoneal macrophages were obtained by injecting C57BL/6 mice with 3% thioglycollate broth followed by peritoneal lavage 3–5 days later, and maintained in 50% DMEM/F12 media (Gibco BRL). |
T37 | 108-303 | Sentence | denotes | Primary peritoneal macrophages were obtained by injecting C57BL/6 mice with 3% thioglycollate broth followed by peritoneal lavage 3–5 days later, and maintained in 50% DMEM/F12 media (Gibco BRL). |
T38 | 304-448 | Sentence | denotes | Precautions were taken to exclude bacterial lipopolysaccharide contamination from all cell cultures through the use of certified LPS-free serum. |
T39 | 449-530 | Sentence | denotes | Cell viability was determined using the trypan blue (Sigma) dye exclusion method. |
T40 | 531-693 | Sentence | denotes | All cultures were routinely checked to exclude Mycoplasma infection by nuclear staining using Hoechst stain 33258 (Sigma) and the MycoAlert Detection Kit (Lonza). |
T41 | 694-789 | Sentence | denotes | Bacterial lipopolysaccharide (LPS) (Salmonella minnesota Strain Re595) was obtained from Sigma. |
T42 | 791-824 | Sentence | denotes | Real-time Quantitative PCR (qPCR) |
T43 | 825-895 | Sentence | denotes | The RNeasy Mini Kit (Qiagen) was used to isolate total RNA from cells. |
T44 | 896-1196 | Sentence | denotes | For cDNA synthesis, 1 µg of total RNA was reverse transcribed using TaqMan® Reverse Transcription Reagents (Applied Biosystems). qPCR was performed using TaqMan® Gene Expression 20X primers for Serpinb2/SerpinB2 (Mm00440905_m1), Cebpb (Mm00843434_s1) and β-actin (Mm00607939_s1) (Applied Biosystems). |
T45 | 1198-1219 | Sentence | denotes | DNA Sequence Analysis |
T46 | 1220-1482 | Sentence | denotes | The DNA sequence of the murine SerpinB2 promoter was determined by sequencing the pUC-based plasmids pDB9406, pDB9402-41 and pDB9402-42, in addition to plasmids prepared from pDB9402-41 and pDB9402-42 containing deletions introduced by exonuclease III digestion. |
T47 | 1483-1960 | Sentence | denotes | Plasmids pDB9406, pDB9402-41 and pDB9402-42 containing genomic DNA isolated from a λFIXII (Stratagene) genomic library prepared from a 129 mouse strain, were kindly provided by Dr. Dominique Belin, University of Geneva. pDB9406 contains a 4.4 kb EcoRI/SpeI genomic fragment spanning the transcription initiation site; pDB9402-41 and pDB9402-42 contain a 1.2 kb EcoRI genomic fragment, located immediately upstream of the pDB9406 EcoRI fragment, cloned in opposite orientations. |
T48 | 1961-2044 | Sentence | denotes | Subcloned inserts were verified by restriction enzyme digestion and DNA sequencing. |
T49 | 2045-2264 | Sentence | denotes | The nucleotide sequence of the 4480 bp murine SerpinB2 gene 5′ flanking region was determined using the ABI PRISM dye terminator cycle sequencing ready reaction kit (Perkin-Elmer) and a PE 373A sequencer (Perkin-Elmer). |
T50 | 2265-2342 | Sentence | denotes | This sequence was deposited in GenBank/EMBL/DDBJ Data Bank with Accession No. |
T51 | 2343-2352 | Sentence | denotes | AF339731. |
T52 | 2354-2373 | Sentence | denotes | Western Blot Assays |
ICD10
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3171 | 578-598 | http://purl.bioontology.org/ontology/ICD10/A49.3 | denotes | Mycoplasma infection |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3603 | 1151-1158 | Protein | denotes | β-actin |
T3602 | 1125-1130 | Protein | denotes | Cebpb |
T3601 | 1099-1107 | Protein | denotes | SerpinB2 |
T3600 | 1090-1098 | Protein | denotes | Serpinb2 |
T3834 | 2091-2099 | Protein | denotes | SerpinB2 |
T3833 | 1456-1471 | Protein | denotes | exonuclease III |
T3832 | 1251-1259 | Protein | denotes | SerpinB2 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4011 | 2091-2099 | Protein | denotes | SerpinB2 |
T4010 | 1456-1471 | Protein | denotes | exonuclease III |
T4009 | 1251-1259 | Protein | denotes | SerpinB2 |
T3678 | 1063-1073 | Gene_expression | denotes | Expression |
T3677 | 1151-1158 | Protein | denotes | β-actin |
T3676 | 1125-1130 | Protein | denotes | Cebpb |
T3675 | 1099-1107 | Protein | denotes | SerpinB2 |
T3674 | 1090-1098 | Protein | denotes | Serpinb2 |
R2694 | T3674 | T3678 | themeOf | Serpinb2,Expression |
R2695 | T3675 | T3678 | themeOf | SerpinB2,Expression |
R2696 | T3676 | T3678 | themeOf | Cebpb,Expression |
R2697 | T3677 | T3678 | themeOf | β-actin,Expression |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4022 | 2091-2099 | Protein | denotes | SerpinB2 |
T4021 | 1456-1471 | Protein | denotes | exonuclease III |
T4020 | 1251-1259 | Protein | denotes | SerpinB2 |
T3692 | 1151-1158 | Protein | denotes | β-actin |
T3691 | 1125-1130 | Protein | denotes | Cebpb |
T3690 | 1099-1107 | Protein | denotes | SerpinB2 |
T3689 | 1090-1098 | Protein | denotes | Serpinb2 |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4016 | 2091-2099 | Protein | denotes | SerpinB2 |
T4015 | 1456-1471 | Protein | denotes | exonuclease III |
T4014 | 1251-1259 | Protein | denotes | SerpinB2 |
T3684 | 1151-1158 | Protein | denotes | β-actin |
T3683 | 1125-1130 | Protein | denotes | Cebpb |
T3682 | 1099-1107 | Protein | denotes | SerpinB2 |
T3681 | 1090-1098 | Protein | denotes | Serpinb2 |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4499 | 2435-2446 | Entity | denotes | 150 mM NaCl |
T4497 | 2520-2547 | Entity | denotes | separated on 4–12% Bis-Tris |
T4495 | 2495-2503 | Protein | denotes | 0.1% SDS |
T4493 | 2476-2504 | Entity | denotes | 0.5% deoxycholate, 0.1% SDS) |
T4490 | 2423-2468 | Entity | denotes | 10 mM Tris, 150 mM NaCl, 1%Triton X-100, 0.5% |
T4485 | 2429-2447 | Entity | denotes | Tris, 150 mM NaCl, |
T4482 | 2555-2572 | Entity | denotes | gels (Invitrogen) |
T4481 | 2506-2514 | Protein | denotes | proteins |
T4057 | 2091-2099 | Protein | denotes | SerpinB2 |
T4056 | 1198-1201 | Entity | denotes | DNA |
T4055 | 2296-2338 | Protein | denotes | GenBank/EMBL/DDBJ Data Bank with Accession |
T4054 | 1538-1634 | Entity | denotes | genomic DNA isolated from a λFIXII (Stratagene) genomic library prepared from a 129 mouse strain |
T4053 | 1912-1927 | Entity | denotes | EcoRI fragment, |
T4052 | 2299-2303 | Protein | denotes | Bank |
T4051 | 2049-2059 | Entity | denotes | nucleotide |
T4050 | 2045-2107 | Protein | denotes | The nucleotide sequence of the 4480 bp murine SerpinB2 gene 5′ |
T4049 | 1321-1324 | Entity | denotes | pDB |
T4048 | 1224-1227 | Entity | denotes | DNA |
T4047 | 1996-2024 | Protein | denotes | restriction enzyme digestion |
T4046 | 2145-2158 | Protein | denotes | the ABI PRISM |
T4045 | 2296-2338 | Protein | denotes | GenBank/EMBL/DDBJ Data Bank with Accession |
T4044 | 1251-1259 | Protein | denotes | SerpinB2 |
T4043 | 1766-1799 | Entity | denotes | the transcription initiation site |
T4042 | 2229-2233 | Protein | denotes | a PE |
T4041 | 1844-1847 | Protein | denotes | Eco |
T4040 | 1729-1734 | Entity | denotes | EcoRI |
T4039 | 1237-1268 | Entity | denotes | of the murine SerpinB2 promoter |
T4038 | 1298-1303 | Entity | denotes | the p |
T4037 | 1456-1481 | Protein | denotes | exonuclease III digestion |
T3719 | 1050-1085 | Gene_expression | denotes | TaqMan® Gene Expression 20X primers |
T3718 | 884-894 | Entity | denotes | from cells |
T3717 | 924-933 | Protein | denotes | total RNA |
T3716 | 874-883 | Protein | denotes | total RNA |
T3715 | 819-823 | Protein | denotes | qPCR |
T3714 | 791-824 | Protein | denotes | Real-time Quantitative PCR (qPCR) |
T3713 | 1125-1146 | Protein | denotes | Cebpb (Mm00843434_s1) |
T3712 | 836-853 | Protein | denotes | Mini Kit (Qiagen) |
T3711 | 1151-1174 | Protein | denotes | β-actin (Mm00607939_s1) |
T3710 | 1050-1062 | Protein | denotes | TaqMan® Gene |
T3709 | 964-1023 | Entity | denotes | TaqMan® Reverse Transcription Reagents (Applied Biosystems) |
T3708 | 900-914 | Entity | denotes | cDNA synthesis |
T3707 | 1090-1124 | Protein | denotes | Serpinb2/SerpinB2 (Mm00440905_m1), |
T3315 | 108-237 | Binding | denotes | Primary peritoneal macrophages were obtained by injecting C57BL/6 mice with 3% thioglycollate broth followed by peritoneal lavage |
T3314 | 570-618 | Regulation | denotes | exclude Mycoplasma infection by nuclear staining |
T3313 | 54-64 | Entity | denotes | penicillin |
T3312 | 449-463 | Entity | denotes | Cell viability |
T3311 | 502-507 | Protein | denotes | Sigma |
T3310 | 108-138 | Entity | denotes | Primary peritoneal macrophages |
T3309 | 489-508 | Entity | denotes | trypan blue (Sigma) |
T3308 | 65-77 | Entity | denotes | streptomycin |
T3307 | 694-728 | Entity | denotes | Bacterial lipopolysaccharide (LPS) |
T3306 | 433-441 | Entity | denotes | LPS-free |
T3305 | 281-284 | Protein | denotes | F12 |
T3304 | 292-301 | Protein | denotes | Gibco BRL |
T3303 | 54-87 | Entity | denotes | penicillin/streptomycin/glutamate |
T3302 | 724-727 | Entity | denotes | LPS |
T3301 | 187-201 | Entity | denotes | thioglycollate |
T3300 | 671-692 | Protein | denotes | Detection Kit (Lonza) |
T3299 | 348-366 | Entity | denotes | lipopolysaccharide |
T3298 | 783-788 | Protein | denotes | Sigma |
T3297 | 54-87 | Entity | denotes | penicillin/streptomycin/glutamate |
T3296 | 646-651 | Protein | denotes | Sigma |
R2698 | T3710 | T3719 | themeOf | TaqMan® Gene,TaqMan® Gene Expression 20X primers |
R2951 | T4039 | T4044 | partOf | of the murine SerpinB2 promoter,SerpinB2 |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4029 | 2149-2158 | Protein | denotes | ABI PRISM |
T4028 | 1904-1926 | Protein | denotes | pDB9406 EcoRI fragment |
T4027 | 1844-1849 | Protein | denotes | EcoRI |
T4026 | 1735-1739 | Protein | denotes | SpeI |
T4025 | 1729-1734 | Protein | denotes | EcoRI |
T4024 | 1456-1471 | Protein | denotes | exonuclease III |
T4023 | 1244-1268 | Protein | denotes | murine SerpinB2 promoter |
T3699 | 1160-1173 | Protein | denotes | Mm00607939_s1 |
T3698 | 1151-1158 | Protein | denotes | β-actin |
T3697 | 1132-1145 | Protein | denotes | Mm00843434_s1 |
T3696 | 1125-1130 | Protein | denotes | Cebpb |
T3695 | 1109-1122 | Protein | denotes | Mm00440905_m1 |
T3694 | 1099-1107 | Protein | denotes | SerpinB2 |
T3693 | 1090-1098 | Protein | denotes | Serpinb2 |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3803 | 1456-1471 | Protein | denotes | exonuclease III |
T3802 | 1251-1259 | Protein | denotes | SerpinB2 |
T3804 | 2091-2099 | Protein | denotes | SerpinB2 |
T3571 | 1151-1158 | Protein | denotes | β-actin |
T3570 | 1125-1130 | Protein | denotes | Cebpb |
T3569 | 1099-1107 | Protein | denotes | SerpinB2 |
T3568 | 1090-1098 | Protein | denotes | Serpinb2 |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3810 | 2091-2099 | Protein | denotes | SerpinB2 |
T3809 | 1456-1471 | Protein | denotes | exonuclease III |
T3808 | 1251-1259 | Protein | denotes | SerpinB2 |
T3807 | 2091-2099 | Protein | denotes | SerpinB2 |
T3806 | 1456-1471 | Protein | denotes | exonuclease III |
T3805 | 1251-1259 | Protein | denotes | SerpinB2 |
T3579 | 1151-1158 | Protein | denotes | β-actin |
T3578 | 1125-1130 | Protein | denotes | Cebpb |
T3577 | 1099-1107 | Protein | denotes | SerpinB2 |
T3576 | 1090-1098 | Protein | denotes | Serpinb2 |
T3575 | 1151-1158 | Protein | denotes | β-actin |
T3574 | 1125-1130 | Protein | denotes | Cebpb |
T3573 | 1099-1107 | Protein | denotes | SerpinB2 |
T3572 | 1090-1098 | Protein | denotes | Serpinb2 |