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PMC:3589482 / 587-772 JSONTXT

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bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T856 30-38 NN denotes promoter
T855 21-29 CD denotes SerpinB2
T854 7-20 JJ denotes LPS-regulated
T853 3-6 DT denotes the
T883 179-183 IN denotes into
T882 171-178 NNS denotes mutants
T881 162-170 NN denotes deletion
T880 154-161 JJ denotes several
T879 150-153 CC denotes and
T878 145-149 NN denotes gene
T877 136-144 NNP denotes SerpinB2
T876 129-135 NN denotes murine
T875 125-128 DT denotes the
T874 122-124 IN denotes of
T873 115-121 NN denotes region
T872 106-114 VBG denotes flanking
T871 105-106 : denotes -
T870 104-105 '' denotes '
T869 103-104 CD denotes 5
T868 100-102 NN denotes kb
T867 98-99 CD denotes 5
T866 97-98 NN denotes ∼
T865 93-96 DT denotes the
T864 90-92 IN denotes by
T863 83-89 VBN denotes driven
T862 72-82 NNS denotes constructs
T861 63-71 NN denotes reporter
T860 51-62 VBD denotes transfected
T859 48-50 PRP denotes we
T858 46-47 , denotes ,
T857 39-46 NNS denotes regions
R440 T853 T857 det the,regions
R441 T854 T857 amod LPS-regulated,regions
R442 T855 T857 nummod SerpinB2,regions
R443 T856 T857 compound promoter,regions
R445 T858 T860 punct ",",transfected
R446 T859 T860 nsubj we,transfected
R447 T860 T860 ROOT transfected,transfected
R448 T861 T862 compound reporter,constructs
R449 T862 T860 dobj constructs,transfected
R450 T863 T862 acl driven,constructs
R451 T864 T863 agent by,driven
R452 T865 T873 det the,region
R453 T866 T868 nmod ∼,kb
R454 T867 T866 nummod 5,∼
R455 T868 T872 meta kb,flanking
R456 T869 T868 nummod 5,kb
R457 T870 T869 punct ',5
R458 T871 T872 punct -,flanking
R459 T872 T873 amod flanking,region
R460 T873 T864 pobj region,by
R461 T874 T873 prep of,region
R462 T875 T878 det the,gene
R463 T876 T878 compound murine,gene
R464 T877 T878 compound SerpinB2,gene
R465 T878 T874 pobj gene,of
R466 T879 T878 cc and,gene
R467 T880 T882 amod several,mutants
R468 T881 T882 compound deletion,mutants
R469 T882 T878 conj mutants,gene
R470 T883 T863 prep into,driven

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T340 179-183 IN denotes into
T339 171-178 NN denotes mutants
T338 162-170 NN denotes deletion
T337 154-161 JJ denotes several
T336 150-153 CC denotes and
T335 145-149 NN denotes gene
T334 136-144 NN denotes SerpinB2
T333 129-135 JJ denotes murine
T332 125-128 DT denotes the
T331 122-124 IN denotes of
T330 115-121 NN denotes region
T329 103-114 JJ denotes 5'-flanking
T328 100-102 NN denotes kb
T327 97-99 CD denotes ∼5
T326 93-96 DT denotes the
T325 90-92 IN denotes by
T324 83-89 VB denotes driven
T323 72-82 NN denotes constructs
T322 63-71 NN denotes reporter
T321 51-62 VB denotes transfected
T320 48-50 PRP denotes we
T319 46-47 -COMMA- denotes ,
T318 39-46 NN denotes regions
T317 30-38 NN denotes promoter
T316 21-29 NN denotes SerpinB2
T315 7-20 JJ denotes LPS-regulated
T314 3-6 DT denotes the
R125 T318 T314 arg1Of regions,the
R126 T318 T315 arg1Of regions,LPS-regulated
R127 T318 T316 arg1Of regions,SerpinB2
R128 T318 T317 arg1Of regions,promoter
R130 T320 T321 arg1Of we,transfected
R132 T321 T319 arg1Of transfected,","
R133 T323 T321 arg2Of constructs,transfected
R134 T323 T322 arg1Of constructs,reporter
R135 T323 T324 arg2Of constructs,driven
R136 T330 T324 arg1Of region,driven
R137 T330 T325 arg2Of region,by
R138 T330 T326 arg1Of region,the
R139 T330 T327 arg1Of region,∼5
R140 T330 T328 arg1Of region,kb
R141 T330 T329 arg1Of region,5'-flanking
R142 T330 T331 arg1Of region,of
R143 T330 T340 arg1Of region,into
R144 T335 T332 arg1Of gene,the
R145 T335 T333 arg1Of gene,murine
R146 T335 T334 arg1Of gene,SerpinB2
R147 T335 T336 arg1Of gene,and
R148 T336 T331 arg2Of and,of
R149 T339 T336 arg2Of mutants,and
R150 T339 T337 arg1Of mutants,several
R151 T339 T338 arg1Of mutants,deletion

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T165 21-29 Protein denotes SerpinB2
T166 136-144 Protein denotes SerpinB2

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T532 21-29 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2
T533 136-144 http://www.uniprot.org/uniprot/P05120 denotes SerpinB2

simple1

Id Subject Object Predicate Lexical cue
T218 21-29 Protein denotes SerpinB2
T219 136-144 Protein denotes SerpinB2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T500 21-29 Protein denotes SerpinB2
T499 136-144 Protein denotes SerpinB2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T609 136-144 Protein denotes SerpinB2
T610 21-29 Protein denotes SerpinB2

DLUT931

Id Subject Object Predicate Lexical cue
T575 136-144 Protein denotes SerpinB2
T576 21-29 Protein denotes SerpinB2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T753 136-144 Protein denotes SerpinB2
T720 21-29 Protein denotes SerpinB2
T729 3-47 Entity denotes the LPS-regulated SerpinB2 promoter regions,
T741 7-20 Entity denotes LPS-regulated
T743 122-149 Protein denotes of the murine SerpinB2 gene

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T649 129-149 Protein denotes murine SerpinB2 gene
T648 21-38 Protein denotes SerpinB2 promoter

testone

Id Subject Object Predicate Lexical cue
T29 136-144 Protein denotes SerpinB2
T28 21-29 Protein denotes SerpinB2

test3

Id Subject Object Predicate Lexical cue
T80 136-144 Protein denotes SerpinB2
T79 21-29 Protein denotes SerpinB2
T58 136-144 Protein denotes SerpinB2
T57 21-29 Protein denotes SerpinB2